Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g067110.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 6.4e-257 890.2 434 100.0
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 4.3e-253 877.5 429 99.1
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 1.8e-243 845.5 430 95.1
Nitab4.5_0003532g0040 Nicotiana tabacum HOM05D003289 ORTHO05D004594 2.5e-232 808.5 445 89.4
Nitab4.5_0004240g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 2.3e-230 802.0 445 88.8
Peaxi162Scf00544g00922 Petunia axillaris HOM05D003289 ORTHO05D004594 8.2e-220 766.9 424 89.2
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 4.5e-218 761.1 425 85.6
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 4.2e-216 754.6 429 84.6
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 3.6e-215 751.5 429 83.7
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 7.9e-215 750.4 429 83.7
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 1.5e-213 746.1 429 83.2
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 2.6e-213 745.3 422 82.9
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 1.7e-212 742.7 419 83.5
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 3.1e-211 738.4 432 82.4
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 5.3e-211 737.6 422 83.4
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 2.2e-209 732.3 425 81.6
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 6.5e-209 730.7 424 82.8
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 8.5e-209 730.3 429 80.7
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 1.1e-208 729.9 424 81.8
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 9.4e-208 726.9 422 81.0
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 3.6e-207 724.9 423 80.1
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 4.7e-207 724.5 422 81.5
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 1.0e-206 723.4 425 81.4
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 1.8e-206 722.6 422 81.3
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 3.9e-206 721.5 430 80.2
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 5.2e-206 721.1 429 80.7
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 6.7e-206 720.7 424 80.4
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 6.7e-206 720.7 421 81.5
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 1.1e-205 719.9 423 80.6
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 1.5e-205 719.5 423 80.4
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 2.0e-205 719.2 423 80.6
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 2.8e-204 715.3 429 79.7
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 2.8e-204 715.3 426 79.8
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 8.2e-204 713.8 422 80.6
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 4.1e-203 711.4 422 79.9
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 5.3e-203 711.1 423 80.9
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 1.6e-202 709.5 424 79.0
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 2.0e-202 709.1 423 78.7
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 1.0e-201 706.8 430 79.1
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.3e-201 706.4 422 79.4
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.7e-201 706.1 423 79.4
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 2.9e-201 705.3 423 78.3
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 2.9e-201 705.3 424 78.8
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 2.9e-201 705.3 423 78.5
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 6.5e-201 704.1 423 78.3
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 6.5e-201 704.1 425 77.9
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 1.1e-200 703.4 421 78.1
FAN21G1989 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.9e-200 702.6 423 79.4
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 3.2e-200 701.8 423 79.4
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 3.2e-200 701.8 423 79.2
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 4.2e-200 701.4 424 78.5
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 5.5e-200 701.0 423 79.4
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 1.6e-199 699.5 423 77.3
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 2.7e-199 698.7 424 79.5
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 2.7e-199 698.7 432 78.0
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 3.6e-199 698.4 441 76.0
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 4.7e-199 698.0 424 79.2
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 4.7e-199 698.0 423 77.3
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 1.8e-198 696.0 423 76.6
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.3e-198 695.7 424 77.8
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 2.3e-198 695.7 424 77.8
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 5.2e-198 694.5 426 77.5
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 6.7e-198 694.1 423 76.6
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 8.8e-198 693.7 423 76.4
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 8.8e-198 693.7 427 76.6
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 8.8e-198 693.7 424 78.3
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 8.8e-198 693.7 425 77.6
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 1.2e-197 693.3 423 76.4
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 1.5e-197 693.0 423 76.4
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 2.6e-197 692.2 423 75.9
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 9.7e-197 690.3 478 72.0
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.3e-196 689.9 427 76.1
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 1.3e-196 689.9 427 76.1
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 6.3e-196 687.6 421 80.0
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 5.3e-195 684.5 472 71.0
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 1.2e-194 683.3 430 76.3
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 7.7e-194 680.6 422 75.8
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 7.2e-192 674.1 436 75.7
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 6.1e-191 671.0 453 72.6
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 1.0e-190 670.2 419 73.7
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 5.2e-190 667.9 430 73.3
Os02g0511900 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 8.8e-190 667.2 417 75.1
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 8.8e-190 667.2 419 75.4
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 4.4e-189 664.8 404 75.7
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 5.7e-189 664.5 422 76.1
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla HOM05D003289 ORTHO05D004594 1.1e-187 660.2 374 83.2
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.8e-187 659.4 404 75.2
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 1.8e-187 659.4 419 77.3
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 2.4e-187 659.1 429 75.3
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 5.4e-187 657.9 423 73.5
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 3.5e-186 655.2 432 75.5
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 2.3e-185 652.5 409 74.6
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.3e-180 636.7 461 69.8
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 3.7e-180 635.2 430 72.1
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 5.4e-171 604.7 413 67.6
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 7.8e-170 600.9 422 66.1
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 2.0e-165 586.3 405 68.4
CAN.G1177.10 Capsicum annuum HOM05D003289 ORTHO05D004594 4.4e-165 585.1 369 80.5
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 6.2e-159 564.7 402 66.2
Ah.08g215950 Amaranthus hybridus HOM05D003289 ORTHO05D004594 1.9e-155 553.1 423 65.7
Cpa.g.sc32.133 Carica papaya HOM05D003289 ORTHO05D004594 3.3e-144 515.8 300 79.7
CDE02G3768 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 5.6e-144 515.0 422 61.6
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 2.2e-140 503.1 442 55.4
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 3.5e-138 495.7 431 58.7
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 5.6e-136 488.4 278 81.3
QL02p000127 Quercus lobata HOM05D003289 ORTHO05D004594 2.6e-133 479.6 271 81.2
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 3.4e-125 452.6 459 49.2
Aqoxy16s008 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 3.8e-124 449.1 280 78.9
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 2.1e-122 443.4 406 51.7
CBR_g8395 Chara braunii HOM05D003289 ORTHO05D004594 1.4e-118 430.6 294 68.7
CARHR038410 Cardamine hirsuta HOM05D003289 ORTHO05D004594 2.0e-117 426.8 316 67.1
HanXRQChr09g0249461 Helianthus annuus HOM05D003289 ORTHO05D004594 5.7e-112 408.7 242 79.3
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 1.8e-105 387.1 412 45.4
MBI15_g40425_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 8.2e-103 378.3 280 68.9
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 7.7e-101 371.7 259 70.7
QL02p053680 Quercus lobata HOM05D003289 ORTHO05D004594 3.1e-70 270.0 156 82.1
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-68 264.6 167 77.2
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.5e-67 261.2 143 80.4
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 7.2e-67 258.8 167 75.4
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-66 257.7 167 74.9
Zm00001eb179700 Zea mays HOM05D003289 ORTHO05D004594 9.8e-64 248.4 142 75.4
MBI15_g40424_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.1e-58 230.7 143 72.7
QL09p040364 Quercus lobata HOM05D000370 ORTHO05D001335 2.4e-54 217.2 167 68.3
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 2.0e-48 197.6 104 82.7
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 9.2e-46 188.7 181 55.8
Gohir.D05G085450 Gossypium hirsutum HOM05D003289 ORTHO05D004594 4.6e-45 186.4 132 72.0
Cpa.g.sc32.135 Carica papaya HOM05D003289 ORTHO05D004594 5.6e-43 179.5 139 64.7
FAN25G3673 Fragaria x ananassa HOM05D003289 ORTHO05D004594 3.4e-40 170.2 145 63.4
CARHR038400 Cardamine hirsuta HOM05D003289 ORTHO05D004594 7.1e-38 162.5 159 53.5
Aa31LG1G200 Aethionema arabicum HOM05D003289 ORTHO05D004594 9.2e-38 162.2 105 75.2
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 3.2e-30 137.1 70 88.6
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 8.7e-28 129.0 75 72.0
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 5.6e-27 126.3 75 70.7
Aa31LG1G190 Aethionema arabicum HOM05D003289 ORTHO05D026451 2.4e-25 120.9 162 45.1
Cfa019187 Carpinus fangiana HOM05D003289 ORTHO05D034141 2.0e-16 91.3 51 74.5
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-15 87.8 53 75.5
Zm00001eb135070 Zea mays HOM05D003289 ORTHO05D034141 2.9e-15 87.4 44 79.5
Zm00001eb147670 Zea mays HOM05D003289 ORTHO05D034141 2.9e-15 87.4 44 79.5
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 6.4e-15 86.3 53 73.6
TPR.G328 Trifolium pratense HOM05D003289 ORTHO05D004594 7.6e-08 62.8 34 85.3
BolC5t29400H Brassica oleracea HOM05D003289 ORTHO05D004594 4.9e-07 60.1 35 82.9
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 1.1e-06 58.9 32 87.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (3 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (3 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (3 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (11 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings