Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr3.3336chr3-View
Actinidia chinensisActinidia07230Lachesis_group13+View
Arabidopsis lyrataAL1G18660scaffold_1+View
Amaranthus hybridusAh.08g215940DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase 2 a) (AtPOL2a) (DNA polymerase II subunit a) (Protein ABA OVERLY SENSITIVE a) (Protein EARLY IN SHORT DAYS 7) (Protein EMBRYO DEFECTIVE 142) (Protein EMBRYO DEFECTIVE 2284) (Protein EMBRYO DEFECTIVE 529) (Protein TILTED 1)AmaHy_arrow1_Scaffold_8-View
Aquilegia oxysepalaAqoxy2G01337CHR02-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.B2Y78KPTHR10670//PTHR10670:SF4 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.03-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.F25EMMK02324 - DNA polymerase epsilon subunit 1 (POLE1)arahy.Tifrunner.gnm1.Arahy.13-View
Arabidopsis thalianaAT1G08260DNA polymerase epsilon catalytic subunit Similar to POL2A%2C DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal%2C partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. TILTED 1 (TIL1)%3B FUNCTIONS IN: DNA-directed DNA polymerase activity%2C DNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: positive regulation of S phase of mitotic cell cycle%2C negative regulation of long-day photoperiodism%2C flowering%2C embryo development ending in seed dormancy%3B LOCATED IN: apoplast%2C epsilon DNA polymerase complex%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA polymerase%2C family B (InterPro:IPR022762)%2C DNA-directed DNA polymerase%2C family B%2C exonuclease domain (InterPro:IPR006133)%2C Domain of unknown function DUF1744 (InterPro:IPR013697)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C DNA-directed DNA polymerase%2C family B%2C conserved region (InterPro:IPR006134)%3B BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1)%3B Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331%3B Bacteria - 603%3B Metazoa - 305%3B Fungi - 291%3B Plants - 83%3B Viruses - 58%3B Other Eukaryotes - 340 (source: NCBI BLink).Chr1+View
Amborella trichopodaATR0820G092AmTr_v1.0_scaffold00040+View
Brassica carinataBcaB07g34067ChrB07+View
Brassica napusC05p06350C05+View
Brassica napusA06p05280A06+View
Brassica oleraceaBolC5t29391HC5+View
Brassica rapaBraA06t23736ZA06+View
Beta vulgarisEL10Ac7g15792K02324 - DNA polymerase epsilon subunit 1 (POLE1)Chr7_EL10_PGA_scaffold5+View
Capsicum annuumCAN.G644.7PGAv.1.6.scaffold644-View
Cannabis sativaCANSAT54G1671NC_044375.1+View
Corylus avellanaHaze_23425Similar to POL2A: DNA polymerase epsilon catalytic subunit A (Arabidopsis thaliana OX%3D3702)6-View
Coffea canephoraCc01_g09530Putative DNA polymerase epsilon catalytic subunit Achr1-View
Citrus clementinaCiclev10027662m.gscaffold_8-View
Carya illinoinensisCiPaw.13G138800PTHR10670//PTHR10670:SF4 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A // SUBFAMILY NOT NAMEDChr13-View
Citrullus lanatusClCG02G022050DNA polymeraseCG_Chr02+View
Cucumis meloMELO3C021434.2DNA polymerase epsilon catalytic subunit Achr11+View
Carica papayaCpa.g.sc32.131supercontig_32-View
Chenopodium quinoaAUR62039240POL2A: DNA polymerase epsilon catalytic subunit AC_Quinoa_Scaffold_2771-View
Chenopodium quinoaAUR62009793POL2A: DNA polymerase epsilon catalytic subunit AC_Quinoa_Scaffold_2493-View
Cucumis sativus L.CsaV3_6G014890DNA polymerase epsilon catalytic subunitchr6+View
Daucus carotaDCAR_012181hypothetical proteinDCARv2_Chr3+View
Durio zibethinusDuzib168G1226NW_019168159.1-View
Erigeron canadensisECA233G3796Conyza_canadensis_scaffold:1-View
Eucalyptus grandisEucgr.B03882Chr02-View
Erythranthe guttataMigut.N02501scaffold_14+View
Eutrema salsugineumThhalv10006524m.gK02324 - DNA polymerase epsilon subunit 1 (POLE1)scaffold_5-View
Fragaria x ananassaFAN11G3202K02324 - DNA polymerase epsilon subunit 1 (POLE1)Fvb3-4-View
Fragaria x ananassaFAN25G3673PTHR10670 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AFvb3-1+View
Gossypium hirsutumGohir.D05G085400PTHR10670 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT AD05-View
Gossypium hirsutumGohir.A05G082500K02324 - DNA polymerase epsilon subunit 1 (POLE1)A05-View
Glycine maxGlyma.12G087000K02324 - DNA polymerase epsilon subunit 1 (POLE1)Gm12+View
Gossypium raimondiiGorai.009G087200Chr09-View
Hydrangea macrophyllaHma1.2p1_0305F.1_g119455Hma1.2p1_0305F.1+View
Lupinus albusLalb_Chr19g0136661K02324 - DNA polymerase epsilon subunit 1 (POLE1)Lalb_Chr19-View
Lotus japonicusLj3g0000987K02324 - DNA polymerase epsilon subunit 1 (POLE1)chr3+View
Lonicera japonicaLj2C988G5GWHAAZE00000002-View
Lactuca sativaLsat_1_v5_gn_6_39380Lsat_1_v8_lg_6-View
Malus domesticaMD11G1160700DNA polymerase epsilon catalytic subunitChr11+View
Malus domesticaMD03G1139200DNA polymerase epsilon catalytic subunitChr03+View
Manihot esculentaManes.04G006100Chromosome04-View
Medicago truncatulaMedtr4g054980DNA polymerase epsilon catalytic subunit Achr4-View
Nelumbo nuciferaNn2g14071chr2+View
Olea europaeaOeu031488.2scaffold261-View
Petunia axillarisPeaxi162Scf00544g00919DNA polymerase epsilon catalytic subunitPeaxi162Scf00544-View
Punica granatumPGR102G2277NC_045129.1+View
Prunus persicaPrupe.6G124200K02324 - DNA polymerase epsilon subunit 1 (POLE1)Pp06+View
Papaver somniferumPSO384G0460NC_039368.1+View
Populus trichocarpaPotri.004G185700K02324 - DNA polymerase epsilon subunit 1 (POLE1)Chr04-View
Phaseolus vulgarisPhvul.011G091900K02324 - DNA polymerase epsilon subunit 1 (POLE1)Chr11+View
Quercus lobataQL01p0132391-View
Rhododendron simsiiRhsim13G0107600chr13+View
Striga asiaticaSGA_v2.0_scaffold102G29919scaffold102+View
Salvia bowleyanaSalBow3G0618GWHASIU00000006+View
Salix brachistaSabra04G0125000GWHAAZH00000004-View
Simmondsia chinensisSc21g0007220GWHAASQ00000021-View
Sechium eduleSed0008797LG05+View
Schrenkiella parvulaSp1g06890K02324 - DNA polymerase epsilon subunit 1 (POLE1)ch1-1+View
Solanum pennelliiSopen11g026820Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. | TILTED 1 (TIL1) | FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding | INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy | LOCATED IN: apoplast, epsilon DNA polymerase complex | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: DNA polymerase, family B , DNA-directed DNA polymerase, family B, exonuclease domain , Domain of unknown function DUF1744 , Polynucleotidyl transferase, ribonuclease H fold , DNA-directed DNA polymerase, family B, conserved region | BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunitSpenn-ch11+View
Selenicereus undatusHund20868Scaffold_33673+View
Trochodendron aralioidesTAR636G3131group1+View
Theobroma cacaoThecc.09G288000DNA polymerase epsilon catalytic subunitChromosome_9-View
Tarenaya hasslerianaTHA.LOC104826411DNA polymerase epsilon catalytic subunit ANW_010967707.1+View
Trifolium pratenseTPR.G15595Tp57577_TGAC_v2_scaf_251-View
Utricularia gibbaunitig_22.g6642unitig_22+View
Vaccinium macrocarponvmacro03295Similar to POL2A: DNA polymerase epsilon catalytic subunit A (Arabidopsis thaliana OX%3D3702)chr9_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1127G1826CM024076.1+View
Vitis viniferaGSVIVG01031365001chr6+View