Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063630.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.6e-157 558.1 273 100.0
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.4e-145 518.8 300 87.7
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.4e-145 518.8 300 87.7
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 2.4e-145 518.8 300 87.7
DCAR_031805 Daucus carota HOM05D003783 ORTHO05D004568 3.1e-132 475.3 285 84.6
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 3.1e-132 475.3 285 84.6
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 3.8e-130 468.4 286 84.3
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 4.9e-130 468.0 285 83.5
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 4.9e-130 468.0 285 83.5
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 8.4e-130 467.2 285 83.5
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 5.5e-129 464.5 285 82.1
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 5.5e-129 464.5 285 82.1
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.2e-128 463.4 286 83.2
RhsimMtG0005400 Rhododendron simsii HOM05D003783 ORTHO05D004568 6.7e-127 457.6 285 82.1
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 4.3e-126 454.9 285 81.8
Aqoxy163s002 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 5.7e-126 454.5 285 81.4
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 1.6e-125 453.0 285 81.8
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 1.6e-125 453.0 285 81.8
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 1.6e-125 453.0 285 81.8
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 1.6e-125 453.0 285 81.8
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 2.8e-125 452.2 293 78.2
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 4.8e-125 451.4 285 81.1
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 4.8e-125 451.4 285 81.1
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 1.8e-124 449.5 285 80.7
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 9.0e-124 447.2 285 80.0
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 3.4e-123 445.3 285 79.6
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 2.9e-122 442.2 297 78.1
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.6e-120 436.4 285 78.9
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 2.7e-120 435.6 285 78.6
Nitab4.5_0010936g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 3.0e-119 432.2 271 81.9
CDE02G1256 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 3.9e-119 431.8 285 77.5
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 8.8e-119 430.6 286 76.6
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 7.4e-118 427.6 265 81.1
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 2.2e-117 426.0 287 76.0
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 4.1e-116 421.8 263 82.9
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 4.1e-116 421.8 288 78.1
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 6.9e-116 421.0 292 76.4
CAN.G497.18 Capsicum annuum HOM05D003783 ORTHO05D004568 9.1e-116 420.6 259 82.2
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 3.6e-112 408.7 268 78.0
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 8.8e-111 404.1 304 72.4
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 2.8e-109 399.1 262 78.6
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 5.3e-108 394.8 271 76.0
Lsat_1_v5_gn_7_67781 Lactuca sativa HOM05D003783 ORTHO05D004568 5.0e-106 388.3 271 74.2
HanXRQChr01g0029691 Helianthus annuus HOM05D003783 ORTHO05D004568 1.3e-98 363.6 243 77.4
Peaxi162Scf02040g00001 Petunia axillaris HOM05D003783 ORTHO05D004568 2.5e-97 359.4 216 82.9
HanXRQChr11g0334181 Helianthus annuus HOM05D003783 ORTHO05D004568 5.5e-97 358.2 244 78.7
HanXRQChr17g0544011 Helianthus annuus HOM05D003783 ORTHO05D004568 5.5e-97 358.2 244 78.7
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 8.0e-96 354.4 261 74.7
Dinv06713 Davidia involucrata HOM05D003783 ORTHO05D004568 1.2e-94 350.5 216 81.0
AUR62042333 Chenopodium quinoa HOM05D003783 ORTHO05D004568 2.8e-93 345.9 260 70.4
AUR62033936 Chenopodium quinoa HOM05D003783 ORTHO05D004568 8.3e-93 344.4 259 70.3
ATR1173G003 Amborella trichopoda HOM05D003783 ORTHO05D004568 6.5e-90 334.7 259 68.0
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 3.6e-88 328.9 285 65.6
CAN.G134.19 Capsicum annuum HOM05D003783 ORTHO05D004568 1.8e-87 326.6 273 64.1
Nitab4.5_0000128g0160 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.7e-85 320.1 204 78.4
Lsat_1_v5_gn_4_139080 Lactuca sativa HOM05D003783 ORTHO05D004568 1.2e-83 313.9 212 76.9
Sp3g25860 Schrenkiella parvula HOM05D003783 ORTHO05D004568 7.7e-83 311.2 210 77.1
BraSC177t45761Z Brassica rapa HOM05D003783 ORTHO05D004568 9.5e-81 304.3 194 79.9
BraSC48t46298Z Brassica rapa HOM05D003783 ORTHO05D004568 9.5e-81 304.3 194 79.9
BraSC48t46316Z Brassica rapa HOM05D003783 ORTHO05D004568 9.5e-81 304.3 194 79.9
AL3G44470 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 3.4e-78 295.8 187 80.2
CARHR283230 Cardamine hirsuta HOM05D003783 ORTHO05D004568 2.8e-77 292.7 187 79.7
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.4e-76 290.4 285 57.5
CAN.G1439.8 Capsicum annuum HOM05D003783 ORTHO05D004568 2.8e-72 276.2 252 62.3
Aa31csc549G20 Aethionema arabicum HOM05D003783 ORTHO05D004568 2.2e-69 266.5 204 68.1
BcaC09g49589 Brassica carinata HOM05D003783 ORTHO05D004568 8.3e-69 264.6 184 74.5
C01p34860 Brassica napus HOM05D003783 ORTHO05D004568 8.3e-69 264.6 176 76.1
Eucgr.C03075 Eucalyptus grandis HOM05D003783 ORTHO05D004568 5.4e-68 261.9 149 86.6
PSO782G0649 Papaver somniferum HOM05D003783 ORTHO05D004568 5.4e-68 261.9 237 61.2
Psat6g195120 Pisum sativum HOM05D003783 ORTHO05D004568 2.0e-67 260.0 183 73.8
C01p34760 Brassica napus HOM05D003783 ORTHO05D004568 1.5e-65 253.8 176 73.9
PSO135G0232 Papaver somniferum HOM05D003783 ORTHO05D004568 6.2e-64 248.4 236 59.3
Peaxi162Scf00707g00004 Petunia axillaris HOM05D003783 ORTHO05D004568 1.1e-63 247.7 159 79.2
PSO675G6716 Papaver somniferum HOM05D003783 ORTHO05D004568 1.8e-63 246.9 237 58.2
TPR.G22134 Trifolium pratense HOM05D003783 ORTHO05D004568 3.1e-63 246.1 175 72.0
Nitab4.5_0002589g0080 Nicotiana tabacum HOM05D003783 ORTHO05D004568 7.5e-62 241.5 238 57.6
HanXRQChr01g0013391 Helianthus annuus HOM05D003783 ORTHO05D004568 8.3e-61 238.0 128 91.4
Lj2P1232T100 Lonicera japonica HOM05D003783 ORTHO05D004568 1.4e-60 237.3 126 92.9
PGSC0003DMG400016897 Solanum tuberosum HOM05D003783 ORTHO05D004568 2.4e-60 236.5 120 96.7
GSVIVG01004964001 Vitis vinifera HOM05D003783 ORTHO05D004568 6.6e-58 228.4 258 53.1
GSVIVG01006218001 Vitis vinifera HOM05D003783 ORTHO05D004568 8.6e-58 228.0 258 53.1
SHI36895 Sapria himalayana HOM05D003783 ORTHO05D004568 3.6e-56 222.6 182 64.8
BraSC48t46228Z Brassica rapa HOM05D003783 ORTHO05D004568 1.5e-54 217.2 144 74.3
MSTRG.27795 Avicennia marina HOM05D003783 ORTHO05D004568 2.0e-54 216.9 163 71.2
BolC1t03452H Brassica oleracea HOM05D003783 ORTHO05D004568 1.7e-53 213.8 112 91.1
SalBow1G3009 Salvia bowleyana HOM05D003783 ORTHO05D004568 1.7e-53 213.8 120 89.2
AT2G07768 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 2.4e-52 209.9 114 93.9
ClCG09G015160 Citrullus lanatus HOM05D003783 ORTHO05D004568 4.6e-51 205.7 129 83.7
BolSC28t60306H Brassica oleracea HOM05D003783 ORTHO05D004568 2.1e-48 196.8 184 60.3
BolSC28t60363H Brassica oleracea HOM05D003783 ORTHO05D004568 2.1e-48 196.8 184 60.3
PGR028G0013 Punica granatum HOM05D003783 ORTHO05D004568 2.9e-45 186.4 110 88.2
SEGI_30299 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 2.9e-45 186.4 283 44.9
SHI54253 Sapria himalayana HOM05D003783 ORTHO05D004568 2.4e-44 183.3 126 76.2
Nitab4.5_0008535g0060 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.0e-42 177.9 101 86.1
Sopen05g012690 Solanum pennellii HOM05D003783 ORTHO05D004568 1.3e-42 177.6 97 92.8
BraSC48t46351Z Brassica rapa HOM05D003783 ORTHO05D004568 5.1e-42 175.6 94 94.7
Lsat_1_v5_gn_8_111800 Lactuca sativa HOM05D003783 ORTHO05D004568 1.5e-41 174.1 110 81.8
Sp3g25620 Schrenkiella parvula HOM05D003783 ORTHO05D004568 3.6e-40 169.5 116 74.1
Thhalv10029166m.g Eutrema salsugineum HOM05D003783 ORTHO05D004568 4.8e-40 169.1 89 92.1
AL3G44640 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 1.1e-39 167.9 89 92.1
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus HOM05D003783 ORTHO05D004568 1.1e-39 167.9 89 92.1
BraSC177t45753Z Brassica rapa HOM05D003783 ORTHO05D004568 1.1e-39 167.9 89 92.1
Solyc04g049870.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.1e-39 167.9 184 56.5
BcaC09g49580 Brassica carinata HOM05D003783 ORTHO05D004568 3.1e-39 166.4 89 91.0
ATMG00830 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 4.0e-39 166.0 89 91.0
CARHR283110 Cardamine hirsuta HOM05D003783 ORTHO05D004568 6.9e-39 165.2 89 89.9
Lsat_1_v5_gn_5_16140 Lactuca sativa HOM05D003783 ORTHO05D004568 2.6e-38 163.3 110 77.3
BolC1t03443H Brassica oleracea HOM05D003783 ORTHO05D004568 6.4e-37 158.7 91 86.8
BraSC77t46622Z Brassica rapa HOM05D003783 ORTHO05D004568 1.3e-34 151.0 79 93.7
SHI54470 Sapria himalayana HOM05D003783 ORTHO05D004568 8.1e-32 141.7 101 75.2
Ciclev10003580m.g Citrus clementina HOM05D003783 ORTHO05D004568 3.1e-31 139.8 137 57.7
Lalb_Chr11g0068271 Lupinus albus HOM05D003783 ORTHO05D004568 1.3e-29 134.4 76 82.9
Dinv06615 Davidia involucrata HOM05D003783 ORTHO05D011738 2.2e-29 133.7 63 98.4
MBI19_g47479_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 1.9e-28 130.6 66 93.9
CAN.G1001.41 Capsicum annuum HOM05D003783 ORTHO05D004568 2.4e-28 130.2 204 41.7
BraSC54t46361Z Brassica rapa HOM05D003783 ORTHO05D004568 1.5e-25 120.9 66 87.9
CDE02G3531 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 2.9e-21 106.7 169 40.2
Solyc08g029270.2 Solanum lycopersicum HOM05D003783 ORTHO05D004568 4.2e-20 102.8 64 71.9
BraSC48t46252Z Brassica rapa HOM05D003783 ORTHO05D004568 3.0e-18 96.7 58 79.3
Ah.00g237920 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.8e-15 87.4 120 47.5
CAN.G1576.3 Capsicum annuum HOM05D003783 ORTHO05D004568 2.4e-15 87.0 51 84.3
Lalb_Chr22g0357821 Lupinus albus HOM05D003783 ORTHO05D004568 5.3e-15 85.9 43 81.4
Nitab4.5_0002739g0140 Nicotiana tabacum HOM05D003783 ORTHO05D015637 2.6e-14 83.6 44 88.6
Aqoxy1G02245 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 1.7e-13 80.9 48 91.7
Solyc06g065880.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 3.8e-13 79.7 110 45.5
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 5.5e-12 75.9 36 97.2
TPR.G13188 Trifolium pratense HOM05D003783 ORTHO05D004568 2.1e-11 73.9 44 68.2
CAN.G1439.6 Capsicum annuum HOM05D003783 ORTHO05D004568 4.6e-11 72.8 172 34.9
BcaC09g49594 Brassica carinata HOM05D003783 ORTHO05D004568 6.1e-11 72.4 34 97.1
SHI26672 Sapria himalayana HOM05D003783 ORTHO05D004568 6.1e-11 72.4 60 66.7
Nitab4.5_0011099g0020 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.1e-09 68.2 167 34.1
Solyc03g013380.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.1e-09 68.2 45 77.8
SHI28703 Sapria himalayana HOM05D003783 ORTHO05D004568 2.5e-09 67.0 54 61.1
SHI32491 Sapria himalayana HOM05D003783 ORTHO05D004568 4.8e-08 62.8 119 36.1
CARHR287240 Cardamine hirsuta HOM05D003783 ORTHO05D004568 6.9e-07 58.9 29 93.1
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 9.0e-07 58.5 83 39.8
Peaxi162Scf00720g00065 Petunia axillaris HOM05D003783 ORTHO05D004568 1.2e-06 58.2 37 67.6
Nitab4.5_0000172g1260 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.0e-06 57.4 27 96.3
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 2.6e-06 57.0 30 83.3
Sc22g0004100 Simmondsia chinensis HOM05D003783 ORTHO05D004568 3.4e-06 56.6 29 86.2

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (3 genes)
Brassica oleracea (4 genes)
Brassica rapa (9 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (7 genes)
Cardamine hirsuta (3 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (10 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (6 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (8 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (6 genes)
Schrenkiella parvula (2 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (8 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (2 genes)
Zea mays (6 genes)

Program Settings