Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063620.2 Solanum lycopersicum HOM05D003783 ORTHO05D004568 9.1e-167 590.1 288 100.0
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 4.4e-145 518.1 274 93.4
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.5e-129 466.5 287 82.6
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.5e-129 466.5 287 82.6
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 2.3e-125 452.6 279 83.9
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 4.3e-124 448.4 290 80.3
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 1.6e-123 446.4 290 78.3
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 8.1e-123 444.1 281 80.4
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 4.0e-122 441.8 276 82.2
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 7.6e-121 437.6 277 81.6
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 7.6e-121 437.6 277 81.6
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 1.7e-120 436.4 279 80.6
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 1.7e-120 436.4 279 80.6
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 3.7e-120 435.3 276 81.5
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 3.7e-120 435.3 276 81.5
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 4.9e-120 434.9 277 81.6
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus HOM05D003783 ORTHO05D004568 1.4e-119 433.3 277 79.4
BraSC177t45753Z Brassica rapa HOM05D003783 ORTHO05D004568 1.4e-119 433.3 277 79.4
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 3.2e-119 432.2 280 80.7
CARHR283110 Cardamine hirsuta HOM05D003783 ORTHO05D004568 7.1e-119 431.0 277 79.4
AL3G44640 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 2.1e-118 429.5 277 79.1
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 2.1e-118 429.5 292 77.4
Sp3g25620 Schrenkiella parvula HOM05D003783 ORTHO05D004568 2.7e-118 429.1 277 79.4
ATMG00830 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 6.0e-118 427.9 277 78.7
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 6.0e-118 427.9 276 80.4
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 1.7e-117 426.4 276 81.2
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 3.0e-117 425.6 276 79.7
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 6.6e-117 424.5 276 80.1
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 6.6e-117 424.5 276 80.1
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 6.6e-117 424.5 276 80.1
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 6.6e-117 424.5 276 80.1
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 9.6e-116 420.6 279 78.9
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 1.2e-115 420.2 277 79.1
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 2.8e-115 419.1 279 78.5
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 8.1e-115 417.5 276 78.3
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 6.8e-114 414.5 292 75.3
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 1.2e-113 413.7 276 77.9
SHI54813 Sapria himalayana HOM05D003783 ORTHO05D004568 1.6e-110 403.3 281 76.5
CDE02G3531 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 1.1e-108 397.1 280 76.1
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 7.3e-108 394.4 255 79.6
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 2.1e-107 392.9 283 74.6
SHI54470 Sapria himalayana HOM05D003783 ORTHO05D004568 7.6e-105 384.4 281 74.4
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 2.9e-104 382.5 244 80.7
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 3.8e-104 382.1 279 73.5
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 3.0e-93 345.9 276 68.5
Psat6g195120 Pisum sativum HOM05D003783 ORTHO05D004568 2.5e-92 342.8 262 70.6
BolSC28t60416H Brassica oleracea HOM05D003783 ORTHO05D004568 1.1e-90 337.4 245 71.0
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 5.5e-79 298.5 276 60.5
HanXRQChr11g0334171 Helianthus annuus HOM05D003783 ORTHO05D004568 7.2e-79 298.1 202 75.7
HanXRQChr17g0544021 Helianthus annuus HOM05D003783 ORTHO05D004568 7.2e-79 298.1 202 75.7
Aqoxy163s002 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 9.3e-79 297.7 204 76.0
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 3.0e-77 292.7 204 77.0
Psat7g150720 Pisum sativum HOM05D003783 ORTHO05D004568 2.6e-73 279.6 282 57.8
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.2e-72 276.6 274 58.4
SHI54253 Sapria himalayana HOM05D003783 ORTHO05D004568 2.2e-72 276.6 208 73.6
CAN.G1439.7 Capsicum annuum HOM05D003783 ORTHO05D004568 9.4e-71 271.2 161 81.4
SHI36895 Sapria himalayana HOM05D003783 ORTHO05D004568 3.7e-67 259.2 210 71.4
Thhalv10029166m.g Eutrema salsugineum HOM05D003783 ORTHO05D004568 6.3e-67 258.5 274 54.7
arahy.Tifrunner.gnm1.ann1.BUQ0M3 Arachis hypogaea HOM05D003783 ORTHO05D004568 5.5e-63 245.4 170 78.8
PGSC0003DMG400016897 Solanum tuberosum HOM05D003783 ORTHO05D004568 2.6e-57 226.5 124 91.1
GSVIVG01006218001 Vitis vinifera HOM05D003783 ORTHO05D004568 5.9e-57 225.3 274 48.9
CARHR287240 Cardamine hirsuta HOM05D003783 ORTHO05D004568 1.3e-56 224.2 149 79.2
GSVIVG01004964001 Vitis vinifera HOM05D003783 ORTHO05D004568 5.0e-56 222.2 274 48.5
BraSC224t45815Z Brassica rapa HOM05D003783 ORTHO05D004568 9.1e-50 201.4 153 66.0
BolSC28t60383H Brassica oleracea HOM05D003783 ORTHO05D004568 1.2e-49 201.1 130 74.6
Nitab4.5_0010936g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.2e-49 201.1 156 71.8
BolC1t03458H Brassica oleracea HOM05D003783 ORTHO05D004568 5.5e-47 192.2 145 66.9
TPR.G885 Trifolium pratense HOM05D003783 ORTHO05D004568 3.2e-39 166.4 106 82.1
CDE02G1256 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 3.0e-37 159.8 189 55.6
Sopen05g012690 Solanum pennellii HOM05D003783 ORTHO05D004568 1.4e-34 151.0 82 91.5
Peaxi162Scf00707g00004 Petunia axillaris HOM05D003783 ORTHO05D004568 1.8e-34 150.6 82 92.7
Peaxi162Scf02040g00001 Petunia axillaris HOM05D003783 ORTHO05D004568 1.8e-34 150.6 82 92.7
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 7.0e-34 148.7 113 69.9
CAN.G497.18 Capsicum annuum HOM05D003783 ORTHO05D004568 9.2e-34 148.3 82 91.5
Dinv06713 Davidia involucrata HOM05D003783 ORTHO05D004568 2.9e-32 143.3 85 87.1
Nitab4.5_0000172g1380 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.0e-32 142.5 137 59.9
DCAR_031805 Daucus carota HOM05D003783 ORTHO05D004568 1.9e-31 140.6 85 88.2
DCAR_032038 Daucus carota HOM05D003783 ORTHO05D004568 1.9e-31 140.6 85 88.2
Nitab4.5_0004300g0270 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.9e-31 140.6 82 86.6
Nitab4.5_0002888g0030 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.5e-31 140.2 82 87.8
SalBow1G3009 Salvia bowleyana HOM05D003783 ORTHO05D004568 3.3e-31 139.8 85 87.1
BcaC09g49594 Brassica carinata HOM05D003783 ORTHO05D004568 9.5e-31 138.3 85 85.9
BraSC77t46622Z Brassica rapa HOM05D003783 ORTHO05D004568 9.5e-31 138.3 85 85.9
AUR62042333 Chenopodium quinoa HOM05D003783 ORTHO05D004568 3.6e-30 136.3 85 84.7
Aa31csc549G20 Aethionema arabicum HOM05D003783 ORTHO05D004568 8.0e-30 135.2 85 84.7
RhsimMtG0005400 Rhododendron simsii HOM05D003783 ORTHO05D004568 8.0e-30 135.2 85 84.7
BcaC09g49580 Brassica carinata HOM05D003783 ORTHO05D004568 2.6e-28 130.2 84 82.1
CAN.G124.8 Capsicum annuum HOM05D003783 ORTHO05D004568 2.6e-28 130.2 82 79.3
SEGI_30299 Sequoiadendron giganteum HOM05D003783 ORTHO05D004568 2.2e-27 127.1 209 43.1
MBI19_g47479_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 2.0e-25 120.6 79 79.7
Nitab4.5_0011099g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 7.3e-23 112.1 62 87.1
Sc22g0004100 Simmondsia chinensis HOM05D003783 ORTHO05D004568 4.7e-22 109.4 79 70.9
Eucgr.C03075 Eucalyptus grandis HOM05D003783 ORTHO05D004568 6.2e-22 109.0 82 73.2
Ah.00g237920 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.0e-21 108.2 63 84.1
Solyc02g050290.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.0e-21 108.2 57 93.0
Lalb_Chr22g0357831 Lupinus albus HOM05D003783 ORTHO05D004568 7.5e-20 102.1 70 68.6
CAN.G1576.3 Capsicum annuum HOM05D003783 ORTHO05D004568 2.2e-19 100.5 63 79.4
Solyc10g048130.3 Solanum lycopersicum HOM05D003783 ORTHO05D004568 6.4e-19 99.0 175 39.4
SHI26670 Sapria himalayana HOM05D003783 ORTHO05D004568 4.1e-18 96.3 70 67.1
CAN.G1001.41 Capsicum annuum HOM05D003783 ORTHO05D004568 3.9e-16 89.7 47 89.4
ATR1173G002 Amborella trichopoda HOM05D003783 ORTHO05D004568 9.5e-15 85.1 54 75.9
C05p22550 Brassica napus HOM05D003783 ORTHO05D004568 4.0e-13 79.7 53 83.0
Solyc12g035910.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.2e-12 78.2 49 77.6
BolC5t30954H Brassica oleracea HOM05D003783 ORTHO05D004568 2.9e-11 73.6 53 79.2
Nitab4.5_0005837g0060 Nicotiana tabacum HOM05D000102 ORTHO05D000138 3.2e-10 70.1 40 77.5
BcaC01g03561 Brassica carinata HOM05D025145 ORTHO05D016019 2.7e-09 67.0 52 67.3
SHI11506 Sapria himalayana HOM05D003783 ORTHO05D004568 7.8e-09 65.5 47 72.3
CAN.G60.11 Capsicum annuum HOM05D001322 ORTHO05D001301 1.3e-08 64.7 37 89.2
Solyc04g049870.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 7.3e-07 58.9 34 85.3

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (8 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (7 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (3 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (6 genes)
Schrenkiella parvula (1 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (8 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (2 genes)
Zea mays (6 genes)

Program Settings