Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.7e-154 549.3 272 100.0
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-134 483.4 265 93.2
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-134 483.4 265 93.2
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 1.1e-134 483.4 265 93.2
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 1.1e-134 483.4 265 93.2
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.6e-134 481.1 265 92.8
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.6e-134 481.1 265 92.8
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 5.6e-134 481.1 265 92.8
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 4.8e-133 478.0 265 92.5
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 6.2e-133 477.6 265 92.1
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 1.1e-132 476.9 265 92.1
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 1.4e-132 476.5 265 91.7
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 2.4e-132 475.7 259 93.4
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 4.0e-132 474.9 265 92.5
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 5.8e-131 471.1 265 91.3
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 9.9e-131 470.3 265 91.7
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.3e-130 469.9 265 91.7
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.3e-130 469.9 265 91.7
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.3e-130 469.9 265 91.7
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.3e-130 469.9 265 91.7
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 1.3e-130 469.9 265 91.7
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 4.9e-130 468.0 265 91.3
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.1e-129 466.8 261 91.2
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 3.2e-129 465.3 265 90.9
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 4.2e-129 464.9 265 90.2
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 2.1e-128 462.6 265 90.6
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 3.5e-128 461.8 265 90.2
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 3.5e-128 461.8 265 90.2
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 3.5e-128 461.8 265 90.2
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 1.0e-127 460.3 265 90.2
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 1.8e-127 459.5 262 90.8
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 6.9e-124 447.6 266 86.8
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 1.4e-113 413.3 267 83.5
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.2e-112 410.2 228 90.8
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 2.3e-111 406.0 268 81.3
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 4.3e-110 401.7 265 81.5
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 5.3e-108 394.8 265 80.0
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 1.8e-103 379.8 265 78.9
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.1e-102 377.1 234 85.5
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-101 373.6 253 79.4
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 5.3e-100 368.2 216 89.8
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.7e-98 363.2 265 75.8
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 3.6e-96 355.5 202 91.1
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.5e-90 334.3 270 70.0
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 9.1e-84 314.3 259 69.9
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 1.6e-83 313.5 265 66.4
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 2.7e-80 302.8 240 72.9
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 6.1e-80 301.6 168 92.9
RcHm_v2.0_MTg0498791 Rosa chinensis HOM05D004537 ORTHO05D005492 1.3e-74 283.9 167 88.6
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 6.5e-74 281.6 165 85.5
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 4.2e-73 278.9 165 87.3
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 1.6e-72 276.9 154 92.9
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 6.8e-71 271.6 159 87.4
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 9.8e-70 267.7 234 64.1
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 1.1e-65 254.2 202 70.8
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 8.3e-61 238.0 247 54.7
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.4e-60 236.5 130 93.8
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 3.2e-60 236.1 266 55.3
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 5.9e-59 231.9 128 89.1
BraSC48t46325Z Brassica rapa HOM05D004537 ORTHO05D005492 4.3e-57 225.7 124 94.4
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 2.8e-56 223.0 136 83.1
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 8.0e-56 221.5 128 86.7
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 2.0e-54 216.9 384 40.4
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 4.3e-49 199.1 138 78.3
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 1.4e-47 194.1 137 77.4
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 1.0e-42 177.9 169 60.4
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 3.9e-42 176.0 190 57.9
TPR.G4012 Trifolium pratense HOM05D004537 ORTHO05D005492 7.3e-41 171.8 88 97.7
AUR62044038 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.6e-40 170.6 90 95.6
CAN.G889.6 Capsicum annuum HOM05D004537 ORTHO05D005492 6.2e-40 168.7 89 94.4
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.4e-39 167.5 98 86.7
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 3.1e-39 166.4 94 89.4
Eucgr.E01613 Eucalyptus grandis HOM05D004537 ORTHO05D005492 1.2e-38 164.5 89 93.3
Medtr0024s0110 Medicago truncatula HOM05D004537 ORTHO05D005492 1.2e-38 164.5 197 50.3
SHI27477 Sapria himalayana HOM05D004537 ORTHO05D005492 3.4e-38 162.9 122 70.5
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 4.4e-38 162.5 91 87.9
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.3e-37 161.0 98 85.7
Haze_27101 Corylus avellana HOM05D004537 ORTHO05D005492 1.3e-37 161.0 178 46.1
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 1.1e-36 157.9 156 59.0
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 1.1e-36 157.9 102 77.5
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 3.2e-36 156.4 93 84.9
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 3.2e-36 156.4 93 84.9
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.3e-34 151.0 150 59.3
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 1.3e-34 151.0 90 82.2
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 8.9e-31 138.3 81 84.0
Haze_27411 Corylus avellana HOM05D004537 ORTHO05D005492 4.9e-29 132.5 216 43.5
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.9e-29 132.5 248 41.9
Lalb_Chr20g0115011 Lupinus albus HOM05D004537 ORTHO05D005492 5.4e-28 129.0 112 67.0
SHI20133 Sapria himalayana HOM05D004537 ORTHO05D005492 7.8e-27 125.2 104 66.3
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 1.1e-25 121.3 129 57.4
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 3.3e-25 119.8 110 62.7
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 4.3e-25 119.4 139 52.5
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 4.8e-24 115.9 72 81.9
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 8.1e-24 115.2 64 89.1
Nitab4.5_0001234g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.1e-24 115.2 92 73.9
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 8.1e-24 115.2 64 89.1
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 8.1e-24 115.2 64 89.1
Solyc08g029290.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.0e-22 110.5 72 75.0
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 4.5e-22 109.4 64 85.9
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 3.2e-20 103.2 64 78.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 9.3e-20 101.7 55 85.5
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 3.0e-18 96.7 61 82.0
HPP92_007209 Vanilla planifolia HOM05D004537 ORTHO05D005492 9.0e-15 85.1 40 95.0
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 2.0e-14 84.0 67 67.2
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 2.6e-14 83.6 91 54.9
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 7.6e-14 82.0 50 78.0
CAN.G416.37 Capsicum annuum HOM05D004537 ORTHO05D005492 2.9e-13 80.1 45 86.7
MELO3C027747.2 Cucumis melo HOM05D004537 ORTHO05D005492 2.9e-13 80.1 45 86.7
SHI01747 Sapria himalayana HOM05D004537 ORTHO05D005492 4.2e-12 76.3 92 56.5
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 9.3e-12 75.1 40 87.5
Ah.03g142980 Amaranthus hybridus HOM05D001159 ORTHO05D005492 1.3e-10 71.2 48 77.1
Ah.10g027900 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.3e-08 64.7 32 87.5
Ah.10g028280 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.3e-08 64.7 32 87.5
ATR1125G006 Amborella trichopoda HOM05D004537 ORTHO05D005492 8.1e-08 62.0 33 84.8
Nitab4.5_0004798g0040 Nicotiana tabacum HOM05D005259 ORTHO05D006402 1.4e-07 61.2 36 80.6
BraSC48t46324Z Brassica rapa HOM05D004537 ORTHO05D005492 2.4e-07 60.5 40 77.5
Nitab4.5_0000074g0200 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.8e-06 55.8 30 86.7

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (6 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (4 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (9 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (2 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (1 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (6 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (9 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (9 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (8 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings