Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 7.6e-104 380.6 199 100.0
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 7.6e-104 380.6 199 100.0
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 3.2e-102 375.2 199 98.5
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 9.6e-99 363.6 199 97.5
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 9.6e-99 363.6 199 97.5
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 1.4e-94 349.7 199 93.0
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 3.5e-93 345.1 189 94.7
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 4.3e-91 338.2 195 90.3
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 4.3e-91 338.2 195 90.3
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 1.4e-89 333.2 195 88.7
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 1.7e-87 326.2 188 89.9
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 1.7e-87 326.2 188 89.9
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 1.4e-86 323.2 199 86.4
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 2.4e-86 322.4 189 89.9
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 3.2e-86 322.0 189 89.9
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 5.5e-86 321.2 199 87.4
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 5.5e-86 321.2 199 87.4
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 3.5e-85 318.5 189 88.9
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-85 317.4 189 88.9
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-85 317.4 189 88.9
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 7.9e-85 317.4 189 88.9
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.3e-84 316.6 193 86.5
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 1.3e-84 316.6 189 88.9
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 2.3e-84 315.8 199 85.9
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 3.0e-84 315.5 189 88.4
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.9e-84 315.1 171 95.9
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 1.1e-83 313.5 189 88.4
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.3e-82 310.1 196 84.7
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 1.6e-82 309.7 199 83.4
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 1.6e-82 309.7 195 85.1
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 3.7e-82 308.5 196 84.2
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 3.7e-82 308.5 189 87.8
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 3.7e-82 308.5 189 87.8
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 3.7e-82 308.5 189 87.8
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 3.1e-81 305.4 195 84.6
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 3.1e-81 305.4 189 87.3
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 3.4e-80 302.0 174 89.1
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 3.4e-80 302.0 174 89.1
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 4.9e-79 298.1 199 82.4
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 4.9e-79 298.1 199 82.4
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 1.1e-78 297.0 195 82.6
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 1.4e-78 296.6 155 98.7
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 7.1e-78 294.3 180 86.7
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 3.0e-76 288.9 171 88.3
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 3.0e-76 288.9 182 84.6
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 8.7e-76 287.3 150 98.0
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 1.9e-75 286.2 164 91.5
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 2.4e-73 279.3 158 92.4
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.0e-72 276.2 150 94.0
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 2.1e-69 266.2 178 78.7
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 2.7e-69 265.8 150 94.0
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 6.1e-69 264.6 147 93.9
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 6.1e-69 264.6 147 93.9
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 3.0e-68 262.3 146 93.8
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 8.2e-66 254.2 131 99.2
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 2.4e-65 252.7 143 90.2
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 9.1e-65 250.8 158 84.2
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 1.2e-64 250.4 153 84.3
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 7.7e-64 247.7 133 95.5
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 1.0e-63 247.3 147 88.4
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 6.5e-63 244.6 185 74.1
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 6.5e-63 244.6 185 74.1
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 6.5e-63 244.6 185 74.1
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.1e-62 243.8 187 74.9
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 3.6e-61 238.8 185 71.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.6e-59 232.6 135 88.9
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 8.2e-58 227.6 145 83.4
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 6.9e-57 224.6 150 80.7
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 1.2e-56 223.8 132 87.1
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 1.2e-56 223.8 132 87.1
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 3.4e-56 222.2 122 92.6
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 3.4e-56 222.2 122 92.6
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 3.0e-52 209.1 175 67.4
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 1.5e-51 206.8 119 87.4
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 5.7e-51 204.9 148 73.6
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 7.4e-51 204.5 175 66.9
Lsat_1_v5_gn_5_43041 Lactuca sativa HOM05D007533 ORTHO05D009622 6.1e-45 184.9 115 87.0
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 4.0e-44 182.2 122 77.0
BolC1t03447H Brassica oleracea HOM05D007533 ORTHO05D009622 4.1e-41 172.2 99 90.9
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 2.2e-39 166.4 99 84.8
HanXRQChr07g0189001 Helianthus annuus HOM05D007533 ORTHO05D009622 2.9e-39 166.0 97 92.8
CAN.G649.12 Capsicum annuum HOM05D007533 ORTHO05D009622 8.5e-39 164.5 89 93.3
BraSC54t46363Z Brassica rapa HOM05D007533 ORTHO05D009622 2.3e-36 156.4 86 95.3
Nitab4.5_0010333g0150 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.6e-35 152.9 88 93.2
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.7e-34 150.2 79 94.9
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 5.4e-33 145.2 84 90.5
TPR.G39970 Trifolium pratense HOM05D007533 ORTHO05D009622 4.7e-29 132.1 75 94.7
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 1.4e-25 120.6 76 80.3
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 3.5e-24 115.9 81 75.3
C03p57120 Brassica napus HOM05D007533 ORTHO05D009622 4.5e-24 115.5 80 76.2
BolC3t17989H Brassica oleracea HOM05D007533 ORTHO05D009622 4.5e-24 115.5 80 76.2
Nitab4.5_0000068g0090 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.1e-22 110.9 68 89.7
Peaxi162Scf01098g00011 Petunia axillaris HOM05D007533 ORTHO05D009622 4.3e-22 109.0 64 89.1
Nitab4.5_0002253g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.6e-21 107.1 65 81.5
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.1e-21 106.7 60 90.0
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.8e-21 106.3 83 72.3
ATR0807G043 Amborella trichopoda HOM05D007533 ORTHO05D009622 2.3e-20 103.2 68 80.9
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 4.0e-20 102.4 97 67.0
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 5.2e-20 102.1 73 71.2
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 6.8e-20 101.7 76 69.7
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 9.8e-19 97.8 65 73.8
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 3.7e-18 95.9 68 70.6
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 1.7e-15 87.0 47 89.4
Peaxi162Scf00673g00229 Petunia axillaris HOM05D011380 ORTHO05D016005 1.6e-13 80.5 43 100.0
Nitab4.5_0000832g0090 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.4e-11 72.8 45 80.0
CDE02G0940 Ceratophyllum demersum HOM05D000131 ORTHO05D000086 7.0e-09 65.1 39 79.5
Potri.007G062422 Populus trichocarpa HOM05D007533 ORTHO05D010378 7.0e-09 65.1 59 66.1
Solyc02g021390.1 Solanum lycopersicum HOM05D007533 ORTHO05D016005 7.8e-08 61.6 38 89.5
GSVIVG01010884001 Vitis vinifera HOM05D007533 ORTHO05D009622 4.3e-06 55.8 49 57.1

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (3 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (5 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (4 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (11 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (4 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (4 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (5 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings