Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.3e-77 291.6 140 100.0
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.2e-59 231.1 110 100.0
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 5.1e-38 161.4 110 68.2
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 9.6e-37 157.1 96 78.1
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 2.2e-33 146.0 110 60.0
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 2.2e-33 146.0 110 60.0
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 1.2e-26 123.6 81 70.4
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-26 122.5 117 54.7
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 4.5e-26 121.7 96 56.2
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 4.9e-25 118.2 96 54.2
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.2e-24 115.2 140 50.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 6.0e-23 111.3 93 58.1
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-22 109.4 105 54.3
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 8.7e-22 107.5 92 53.3
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 106.3 97 57.7
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 106.3 97 57.7
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 106.3 97 57.7
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-21 106.3 97 57.7
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 7.4e-21 104.4 90 57.8
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 1.3e-20 103.6 91 56.0
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 2.1e-20 102.8 95 50.5
Solyc10g047100.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-20 102.4 58 84.5
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 3.1e-19 99.0 91 49.5
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 5.3e-19 98.2 125 46.4
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 9.0e-19 97.4 90 50.0
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 3.4e-18 95.5 97 53.6
Solyc11g030860.3 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.8e-18 94.7 51 84.3
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-17 92.8 95 48.4
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 2.2e-17 92.8 85 51.8
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.8e-17 92.0 95 48.4
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 8.4e-17 90.9 90 50.0
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-16 89.7 95 47.4
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.6e-15 86.7 91 48.4
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 2.1e-15 86.3 66 60.6
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-15 85.1 68 63.2
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-15 85.1 68 63.2
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 3.9e-14 82.0 87 49.4
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 3.9e-14 82.0 86 48.8
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 3.9e-14 82.0 102 46.1
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 5.1e-14 81.6 56 66.1
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 8.7e-14 80.9 58 63.8
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-13 79.7 58 63.8
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.9e-13 79.7 58 63.8
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 4.3e-13 78.6 91 48.4
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.3e-13 78.6 58 62.1
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.3e-13 78.6 58 62.1
CAN.G505.3 Capsicum annuum HOM05D002660 ORTHO05D003902 5.7e-13 78.2 58 60.3
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 2.1e-12 76.3 114 40.4
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 4.8e-12 75.1 48 68.8
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-12 74.7 78 44.9
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-12 74.7 78 44.9
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 6.3e-12 74.7 78 44.9
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 6.3e-12 74.7 58 62.1
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.4e-11 73.6 53 60.4
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.8e-11 73.2 84 46.4
CAN.G999.39 Capsicum annuum HOM05D002660 ORTHO05D003902 3.1e-11 72.4 58 58.6
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 6.9e-11 71.2 59 55.9
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 6.9e-11 71.2 65 55.4
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 6.9e-11 71.2 61 54.1
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.5e-10 70.1 49 63.3
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 3.4e-10 68.9 93 39.8
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 3.4e-10 68.9 52 61.5
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.0e-09 67.4 54 59.3
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 2.2e-09 66.2 54 59.3
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.9e-09 65.9 66 43.9
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 5.0e-09 65.1 58 50.0
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 6.5e-09 64.7 58 50.0
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 6.5e-09 64.7 75 45.3
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-08 63.9 58 56.9
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 2.5e-08 62.8 66 50.0
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 5.5e-08 61.6 64 51.6
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea HOM05D002660 ORTHO05D003902 7.2e-08 61.2 93 40.9
Psat1g132480 Pisum sativum HOM05D030242 ORTHO05D030475 9.3e-08 60.8 42 64.3
PGSC0003DMG400009608 Solanum tuberosum HOM05D014842 ORTHO05D010514 9.3e-08 60.8 44 68.2
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.6e-07 60.1 49 53.1
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 2.3e-06 56.2 91 38.5
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 3.0e-06 55.8 44 63.6
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 3.9e-06 55.5 54 53.7
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 3.9e-06 55.5 54 53.7

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (18 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (12 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (2 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (2 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (3 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (4 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (10 genes)
Solanum pennellii (4 genes)
Solanum tuberosum (3 genes)
Striga asiatica (6 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings