Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Solyc11g062110.1	Solanum lycopersicum	HOM05D000216	ORTHO05D000634	2.5e-71	271.9	131	100.0
BolSC45t60875H	Brassica oleracea	HOM05D000216	ORTHO05D000634	1.7e-27	126.3	86	72.1
Lalb_Chr13g0292861	Lupinus albus	HOM05D000216	ORTHO05D000634	3.2e-26	122.1	89	68.5
EL10Ac9g21013	Beta vulgaris	HOM05D000216	ORTHO05D000634	1.1e-23	113.6	143	42.7
CAN.G1576.7	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
CAN.G1738.8	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
CAN.G219.18	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
CAN.G511.8	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
CAN.G939.15	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
Nitab4.5_0002868g0020	Nicotiana tabacum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
PGSC0003DMG402029613	Solanum tuberosum	HOM05D000216	ORTHO05D000634	1.9e-23	112.8	58	89.7
CAN.G1478.17	Capsicum annuum	HOM05D000216	ORTHO05D000634	5.6e-23	111.3	58	87.9
CAN.G1648.9	Capsicum annuum	HOM05D000216	ORTHO05D000634	1.6e-22	109.8	58	87.9
Migut.D01341	Erythranthe guttata	HOM05D000216	ORTHO05D000634	1.6e-22	109.8	85	62.4
LjContig00489g0016986	Lotus japonicus	HOM05D000216	ORTHO05D000634	2.1e-22	109.4	58	84.5
Hma1.2p1_0094F.1_g047102	Hydrangea macrophylla	HOM05D000216	ORTHO05D000634	1.4e-21	106.7	58	79.3
HanXRQChr08g0210181	Helianthus annuus	HOM05D000216	ORTHO05D000634	1.8e-21	106.3	58	81.0
HanXRQChr11g0326611	Helianthus annuus	HOM05D000216	ORTHO05D000634	1.8e-21	106.3	58	81.0
HanXRQCPg0579801	Helianthus annuus	HOM05D000216	ORTHO05D001131	1.8e-21	106.3	58	81.0
Nitab4.5_0000172g0350	Nicotiana tabacum	HOM05D000216	ORTHO05D000634	2.4e-21	105.9	86	66.3
Lsat_1_v5_gn_6_87861	Lactuca sativa	HOM05D000216	ORTHO05D000634	4.0e-21	105.1	58	79.3
EL10As12g24016	Beta vulgaris	HOM05D000216	ORTHO05D001131	5.3e-21	104.8	92	55.4
BolSC45t60938H	Brassica oleracea	HOM05D000216	ORTHO05D000634	9.0e-21	104.0	80	65.0
Hund27655	Selenicereus undatus	HOM05D000216	ORTHO05D000634	9.0e-21	104.0	58	81.0
Hund27866	Selenicereus undatus	HOM05D000216	ORTHO05D000634	9.0e-21	104.0	58	81.0
PGR111G0082	Punica granatum	HOM05D000216	ORTHO05D000634	4.5e-20	101.7	55	85.5
RcHm_v2.0_CPg0502411	Rosa chinensis	HOM05D000216	ORTHO05D000634	4.5e-20	101.7	55	83.6
Lj2C1238G20	Lonicera japonica	HOM05D000216	ORTHO05D000634	5.8e-20	101.3	97	53.6
DCAR_032475	Daucus carota	HOM05D000216	ORTHO05D000634	7.6e-20	100.9	55	81.8
Gohir.A03G019466	Gossypium hirsutum	HOM05D000216	ORTHO05D000634	7.6e-20	100.9	56	83.9
Sed0020606	Sechium edule	HOM05D000216	ORTHO05D000634	2.9e-19	99.0	55	83.6
Sed0024913	Sechium edule	HOM05D000216	ORTHO05D000634	2.9e-19	99.0	55	83.6
Sed0025165	Sechium edule	HOM05D000216	ORTHO05D000634	6.5e-19	97.8	52	86.5
Lalb_Chr09g0335381	Lupinus albus	HOM05D000216	ORTHO05D000634	1.4e-18	96.7	52	80.8
PSO548G0054	Papaver somniferum	HOM05D000216	ORTHO05D000634	1.4e-18	96.7	55	80.0
ATCG00180	Arabidopsis thaliana	HOM05D000216	ORTHO05D000634	1.9e-18	96.3	52	82.7
BraSC151t45696Z	Brassica rapa	HOM05D000216	ORTHO05D000634	1.9e-18	96.3	59	74.6
BraSC140t45587Z	Brassica rapa	HOM05D000216	ORTHO05D000634	2.5e-18	95.9	58	72.4
BraSC151t45702Z	Brassica rapa	HOM05D000216	ORTHO05D000634	2.5e-18	95.9	58	72.4
BraSC58t46478Z	Brassica rapa	HOM05D000216	ORTHO05D000634	2.5e-18	95.9	58	72.4
CARHR281930	Cardamine hirsuta	HOM05D000216	ORTHO05D001131	2.5e-18	95.9	52	80.8
Medtr3g062770	Medicago truncatula	HOM05D000216	ORTHO05D000634	3.2e-18	95.5	52	75.0
Medtr3g062790	Medicago truncatula	HOM05D000216	ORTHO05D000634	3.2e-18	95.5	52	75.0
BolC7t41734H	Brassica oleracea	HOM05D000216	ORTHO05D000634	4.2e-18	95.1	52	80.8
BolSC37t60767H	Brassica oleracea	HOM05D000216	ORTHO05D000634	4.2e-18	95.1	52	80.8
arahy.Tifrunner.gnm1.ann1.YJD706	Arachis hypogaea	HOM05D000216	ORTHO05D000634	7.1e-18	94.4	52	76.9
unitig_91.g26497	Utricularia gibba	HOM05D000216	ORTHO05D000634	9.3e-18	94.0	58	74.1
Medtr8g016510	Medicago truncatula	HOM05D000216	ORTHO05D000634	1.2e-17	93.6	52	73.1
Lalb_Chr24g0400941	Lupinus albus	HOM05D000216	ORTHO05D000634	6.0e-17	91.3	52	76.9
Potri.013G140850	Populus trichocarpa	HOM05D000216	ORTHO05D000634	6.0e-17	91.3	55	74.5
LjContig00318g0019842	Lotus japonicus	HOM05D000216	ORTHO05D000634	3.9e-16	88.6	52	69.2
vmacro22403	Vaccinium macrocarpon	HOM05D000216	ORTHO05D000634	5.1e-16	88.2	59	71.2
Migut.O00862	Erythranthe guttata	HOM05D000216	ORTHO05D000634	8.7e-16	87.4	55	76.4
Lsat_1_v5_gn_8_77281	Lactuca sativa	HOM05D000216	ORTHO05D000634	8.7e-16	87.4	60	65.0
Psat0s5655g0120	Pisum sativum	HOM05D000216	ORTHO05D000634	8.7e-16	87.4	55	65.5
FAN07G1905	Fragaria x ananassa	HOM05D000216	ORTHO05D000634	1.5e-15	86.7	52	76.9
MD01G1014400	Malus domestica	HOM05D000216	ORTHO05D000634	1.9e-15	86.3	58	67.2
Sed0025233	Sechium edule	HOM05D000216	ORTHO05D001131	3.3e-15	85.5	82	54.9
Medtr4g051130	Medicago truncatula	HOM05D000216	ORTHO05D001131	1.3e-14	83.6	45	73.3
AL2G20940	Arabidopsis lyrata	HOM05D000216	ORTHO05D000634	2.1e-14	82.8	77	55.8
Lsat_1_v5_gn_1_96161	Lactuca sativa	HOM05D000216	ORTHO05D000634	2.1e-14	82.8	42	83.3
Lalb_Chr06g0173031	Lupinus albus	HOM05D000216	ORTHO05D000634	1.1e-13	80.5	73	54.8
HPP92_028443	Vanilla planifolia	HOM05D000216	ORTHO05D000634	1.4e-13	80.1	52	67.3
Hund12598	Selenicereus undatus	HOM05D000216	ORTHO05D000634	7.6e-12	74.3	46	71.7
Hund28575	Selenicereus undatus	HOM05D000216	ORTHO05D000634	7.6e-12	74.3	59	61.0
SEGI_37297	Sequoiadendron giganteum	HOM05D000216	ORTHO05D000634	1.4e-10	70.1	91	42.9
BcaB03g16406	Brassica carinata	HOM05D000216	ORTHO05D000634	3.2e-10	68.9	46	67.4
BcaC05g28801	Brassica carinata	HOM05D000216	ORTHO05D000634	3.2e-10	68.9	46	67.4
Peaxi162Scf00122g00087	Petunia axillaris	HOM05D000216	ORTHO05D000634	4.2e-10	68.6	31	96.8
HanXRQChr00c0994g0578181	Helianthus annuus	HOM05D000216	ORTHO05D000634	9.3e-10	67.4	34	85.3
HanXRQChr00c0300g0573171	Helianthus annuus	HOM05D000216	ORTHO05D000634	1.2e-09	67.0	91	46.2
SEGI_00207	Sequoiadendron giganteum	HOM05D000216	ORTHO05D000634	3.5e-09	65.5	75	49.3
SEGI_19449	Sequoiadendron giganteum	HOM05D000216	ORTHO05D000634	3.5e-09	65.5	75	49.3
ClCG10G007470	Citrullus lanatus	HOM05D000014	ORTHO05D000016	3.0e-08	62.4	29	89.7
Nitab4.5_0000453g0180	Nicotiana tabacum	HOM05D021481	ORTHO05D000634	3.0e-08	62.4	34	88.2
Migut.D01416	Erythranthe guttata	HOM05D000216	ORTHO05D000634	3.9e-08	62.0	38	78.9
Sabra10G0056100	Salix brachista	HOM05D000540	ORTHO05D000681	5.7e-07	58.2	37	70.3
SabraPtG0001000	Salix brachista	HOM05D000216	ORTHO05D000634	5.7e-07	58.2	37	70.3
Lalb_Chr07g0192461	Lupinus albus	HOM05D000216	ORTHO05D000634	4.8e-06	55.1	27	85.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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