Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 2.1e-141 505.8 269 100.0
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 5.6e-134 481.1 274 94.5
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.4e-124 449.9 257 94.9
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 3.9e-71 272.3 270 57.4
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 4.1e-68 262.3 283 50.2
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 3.0e-63 246.1 267 50.2
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.5e-62 243.8 252 58.7
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.6e-62 243.0 282 50.4
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 7.4e-62 241.5 284 48.9
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 3.7e-61 239.2 283 47.7
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.7e-61 239.2 284 46.5
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 4.8e-61 238.8 284 46.1
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 5.3e-60 235.3 286 44.8
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 2.9e-58 229.6 284 45.4
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.9e-58 229.6 277 47.3
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.0e-58 228.8 284 45.4
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.5e-57 226.5 282 46.1
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 7.2e-57 224.9 292 44.9
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.2e-56 224.2 270 49.3
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 3.6e-56 222.6 273 44.0
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 3.0e-55 219.5 280 45.7
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 3.9e-55 219.2 280 43.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 6.7e-55 218.4 286 43.4
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 8.8e-55 218.0 280 43.6
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 8.8e-55 218.0 282 43.3
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.1e-54 217.6 267 46.8
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.4e-54 215.7 290 43.8
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 4.4e-54 215.7 267 45.3
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 5.7e-54 215.3 279 42.3
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 9.7e-54 214.5 269 50.9
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.2e-53 213.4 265 46.8
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 2.2e-53 213.4 268 45.9
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.2e-53 213.4 269 43.9
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.8e-53 213.0 264 46.2
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 4.8e-53 212.2 284 42.6
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 6.3e-53 211.8 266 46.2
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.3e-53 211.8 273 45.4
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.8e-52 210.3 265 46.4
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 4.1e-52 209.1 265 46.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 5.3e-52 208.8 318 40.6
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 9.1e-52 208.0 266 46.2
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 9.1e-52 208.0 263 46.4
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 1.2e-51 207.6 260 45.0
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 3.5e-51 206.1 283 42.8
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 3.5e-51 206.1 283 42.0
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 4.5e-51 205.7 280 44.6
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 5.9e-51 205.3 282 43.6
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 7.7e-51 204.9 290 43.8
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 2.9e-50 203.0 262 46.2
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.1e-49 201.1 290 42.4
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 2.5e-49 199.9 284 41.5
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 7.2e-49 198.4 272 46.0
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.2e-48 197.6 290 42.1
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.0e-47 194.5 284 39.8
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 1.5e-46 190.7 324 38.3
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 7.5e-46 188.3 356 36.2
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.3e-45 187.6 296 41.9
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.7e-45 187.2 289 40.5
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.2e-45 186.8 260 41.2
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.8e-44 183.7 274 39.1
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.8e-44 183.7 262 42.4
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 3.5e-43 179.5 273 40.3
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 4.5e-43 179.1 288 39.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.7e-42 177.2 333 35.4
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 8.5e-42 174.9 273 39.2
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 3.2e-41 172.9 283 36.7
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 6.1e-40 168.7 264 39.4
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.2e-39 165.6 158 55.7
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 4.4e-38 162.5 196 47.4
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.2e-37 160.2 284 37.3
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 2.2e-37 160.2 284 37.3
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.8e-37 159.8 295 36.9
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.9e-35 152.1 218 41.7
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-34 151.4 218 41.7
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 2.3e-34 150.2 279 36.6
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 2.9e-34 149.8 269 36.8
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 3.2e-33 146.4 273 34.8
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 3.2e-33 146.4 264 34.5
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 9.5e-33 144.8 209 42.1
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.2e-32 144.4 255 37.6
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.1e-32 143.7 214 42.1
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 8.0e-32 141.7 230 39.1
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.0e-31 139.4 128 57.0
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 5.2e-31 139.0 265 36.2
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 8.8e-31 138.3 262 37.8
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 7.5e-30 135.2 225 36.0
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.2e-29 133.7 124 54.8
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.8e-29 133.3 352 31.0
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.4e-28 131.0 220 39.1
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 3.1e-28 129.8 182 43.4
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.2e-27 127.9 142 50.7
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-27 127.1 184 42.9
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.8e-26 122.9 163 44.8
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 5.6e-25 119.0 128 48.4
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.6e-24 117.5 247 36.4
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 5.2e-23 112.5 128 47.7
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 8.3e-21 105.1 233 32.6
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 2.4e-20 103.6 81 63.0
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 2.4e-20 103.6 131 45.0
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.0e-19 100.5 192 33.3
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 4.6e-19 99.4 103 49.5
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 8.6e-18 95.1 109 48.6
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 2.8e-16 90.1 200 36.0
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 4.7e-16 89.4 111 41.4
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 8.0e-16 88.6 102 42.2
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 5.2e-15 85.9 102 44.1
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 3.4e-14 83.2 108 40.7
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.4e-14 82.8 79 54.4
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.2e-13 80.5 89 48.3
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.7e-13 79.7 98 46.9
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 8.3e-13 78.6 97 45.4
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.4e-12 77.8 197 34.0
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.2e-12 76.6 57 59.6
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 1.8e-07 60.8 66 50.0
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.3e-07 60.5 57 50.9
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 2.0e-06 57.4 97 40.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 5.8e-06 55.8 45 57.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (3 genes)
Corylus avellana (4 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (3 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings