Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.0e-79 298.5 159 100.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.5e-67 258.1 158 86.7
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.5e-67 258.1 158 86.7
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.5e-67 258.1 158 86.7
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.5e-67 258.1 158 86.7
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.5e-67 258.1 158 86.7
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.7e-67 257.3 156 87.8
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.7e-67 257.3 156 87.8
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 3.2e-65 251.9 156 86.5
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 1.1e-60 236.9 156 82.1
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 1.2e-59 233.4 139 87.8
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 8.9e-55 217.2 151 78.8
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.3e-50 203.4 158 71.5
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 7.3e-49 197.6 132 80.3
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 9.8e-46 187.2 151 72.2
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 8.6e-42 174.1 122 77.9
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.8e-39 166.4 102 85.3
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 2.6e-38 162.5 151 66.2
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.8e-38 161.4 105 83.8
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 7.5e-38 161.0 157 62.4
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 8.3e-37 157.5 100 82.0
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 8.3e-37 157.5 100 82.0
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 3.2e-36 155.6 112 75.0
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-33 146.7 110 74.5
CAN.G1045.8 Capsicum annuum HOM05D001070 ORTHO05D002096 2.3e-31 139.4 172 54.7
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 3.1e-31 139.0 155 60.0
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 1.5e-30 136.7 153 58.8
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 4.1e-28 128.6 125 67.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.1e-28 128.6 125 67.2
CAN.G134.9 Capsicum annuum HOM05D001070 ORTHO05D002096 7.1e-28 127.9 181 50.3
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.7e-27 125.9 81 85.2
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 3.5e-27 125.6 121 62.8
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.1e-25 120.6 155 56.1
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 1.1e-25 120.6 155 56.1
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-25 120.6 78 85.9
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 5.6e-25 118.2 136 55.9
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-22 109.0 146 55.5
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.4e-22 108.6 158 53.2
Oeu023335.1 Olea europaea HOM05D001070 ORTHO05D002096 1.1e-20 104.0 122 58.2
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.6e-19 100.1 127 52.8
Potri.002G008176 Populus trichocarpa HOM05D001070 ORTHO05D002096 4.6e-19 98.6 90 71.1
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 1.0e-18 97.4 155 47.1
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.0e-18 97.4 154 51.9
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.3e-18 96.3 106 60.4
Nitab4.5_0000172g2260 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.3e-18 96.3 73 68.5
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.7e-18 94.4 94 66.0
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.7e-18 94.4 94 66.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 8.7e-18 94.4 146 50.0
Solyc08g043160.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.1e-17 94.0 66 83.3
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.5e-17 93.6 154 48.7
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 2.8e-16 89.4 306 32.0
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.8e-16 89.4 100 63.0
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 6.2e-16 88.2 78 71.8
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 1.8e-15 86.7 108 55.6
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 6.9e-15 84.7 102 60.8
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 9.0e-15 84.3 149 46.3
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 3.4e-14 82.4 63 76.2
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 1.7e-13 80.1 115 50.4
C09p25530 Brassica napus HOM05D001070 ORTHO05D002096 6.4e-13 78.2 144 44.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 8.4e-13 77.8 158 41.8
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 1.9e-12 76.6 148 41.9
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-12 75.9 157 40.8
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-12 75.9 157 40.8
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-12 75.9 157 40.8
Nitab4.5_0004137g0090 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.2e-12 75.5 102 47.1
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 9.3e-12 74.3 79 59.5
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-11 73.9 137 46.0
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 4.6e-11 72.0 154 44.8
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 1.0e-10 70.9 156 41.0
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 1.0e-10 70.9 156 41.0
Gohir.1Z050666 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.0e-10 70.9 57 75.4
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.0e-10 70.9 118 48.3
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 1.7e-10 70.1 132 45.5
Sed0021842 Sechium edule HOM05D001070 ORTHO05D002096 1.7e-10 70.1 124 47.6
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 1.7e-10 70.1 132 45.5
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 3.9e-10 68.9 81 63.0
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 3.9e-10 68.9 81 63.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.9e-10 68.9 81 63.0
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 8.7e-10 67.8 81 55.6
Peaxi162Scf00080g00524 Petunia axillaris HOM05D001070 ORTHO05D002096 8.7e-10 67.8 112 42.0
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.9e-09 66.6 136 43.4
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.9e-09 66.6 139 41.7
Atru.chr8.922 Acer truncatum HOM05D001070 ORTHO05D002096 2.5e-09 66.2 95 51.6
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 4.3e-09 65.5 81 53.1
Oeu012767.1 Olea europaea HOM05D001070 ORTHO05D002096 5.6e-09 65.1 73 60.3
BraSC138t45529Z Brassica rapa HOM05D001070 ORTHO05D002096 7.3e-09 64.7 155 38.7
Peaxi162Scf00629g00021 Petunia axillaris HOM05D001032 ORTHO05D000907 1.3e-08 63.9 102 44.1
RcHm_v2.0_Chr4g0392791 Rosa chinensis HOM05D001070 ORTHO05D002096 1.3e-08 63.9 79 58.2
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 2.8e-08 62.8 81 53.1
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 2.8e-08 62.8 81 53.1
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 2.8e-08 62.8 81 53.1
Gohir.A10G117450 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.8e-08 62.8 48 72.9
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 4.8e-08 62.0 64 62.5
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.8e-08 62.0 98 49.0
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.8e-08 62.0 98 49.0
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 6.2e-08 61.6 100 50.0
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-07 60.8 72 54.2
Sed0020782 Sechium edule HOM05D001070 ORTHO05D002096 1.1e-07 60.8 62 62.9
Nitab4.5_0003632g0010 Nicotiana tabacum HOM05D008537 ORTHO05D010652 1.8e-07 60.1 36 75.0
Nitab4.5_0004137g0050 Nicotiana tabacum HOM05D001070 ORTHO05D002096 9.0e-07 57.8 32 93.8
EL10Ac4g08269 Beta vulgaris HOM05D001070 ORTHO05D002096 1.5e-06 57.0 156 37.8
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 2.0e-06 56.6 63 66.7
ScUNg0001540 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.0e-06 56.6 85 51.8
Sc04g0003130 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.6e-06 56.2 98 46.9
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 5.8e-06 55.1 63 55.6
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 9.9e-06 54.3 30 93.3

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (3 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (10 genes)
Brassica rapa (5 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (7 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (10 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (2 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (1 genes)
Glycine max (0 genes)
Gossypium hirsutum (7 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (8 genes)
Olea europaea (4 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (4 genes)
Petunia axillaris (7 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (4 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (4 genes)
Solanum lycopersicum (16 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

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