Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g028350.1 Solanum lycopersicum HOM05D004763 ORTHO05D019264 9.6e-36 152.9 74 100.0
Solyc11g028340.3 Solanum lycopersicum HOM05D004763 ORTHO05D019264 1.3e-11 72.8 40 85.0
PGSC0003DMG401017076 Solanum tuberosum HOM05D004763 ORTHO05D026177 2.1e-11 72.0 40 85.0
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 2.4e-10 68.6 40 82.5
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 2.4e-10 68.6 40 82.5
PGSC0003DMG401029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 2.4e-10 68.6 40 82.5
Solyc11g028330.2 Solanum lycopersicum HOM05D004763 ORTHO05D019264 6.9e-10 67.0 35 91.4
CAN.G646.1 Capsicum annuum HOM05D004763 ORTHO05D007492 9.0e-10 66.6 40 80.0
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.5e-09 65.9 40 77.5
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.5e-09 65.9 40 77.5
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 5.8e-09 63.9 40 72.5
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 2.2e-08 62.0 40 72.5
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 2.2e-08 62.0 40 70.0
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 2.9e-08 61.6 40 70.0
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 2.9e-08 61.6 40 70.0
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 3.8e-08 61.2 40 70.0
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 3.8e-08 61.2 40 70.0
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 4.9e-08 60.8 40 70.0
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 4.9e-08 60.8 40 67.5
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 65.0
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 67.5
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 67.5
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 67.5
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 70.0
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 6.5e-08 60.5 40 70.0
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 8.4e-08 60.1 40 67.5
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 62.5
ClCG02G023620 Citrullus lanatus HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 65.0
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 65.0
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 65.0
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 62.5
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 62.5
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 67.5
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 1.1e-07 59.7 40 62.5
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 1.4e-07 59.3 40 67.5
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 1.4e-07 59.3 40 60.0
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 1.4e-07 59.3 40 65.0
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 60.0
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 60.0
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 65.0
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 65.0
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 65.0
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 65.0
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 57.5
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 57.5
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 57.5
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 57.5
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 57.5
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 67.5
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 1.9e-07 58.9 40 60.0
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 57.5
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 65.0
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 65.0
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 57.5
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 60.0
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 65.0
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 2.5e-07 58.5 40 62.5
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 62.5
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 62.5
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 65.0
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 65.0
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 65.0
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 65.0
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 65.0
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 3.2e-07 58.2 40 60.0
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 4.2e-07 57.8 39 66.7
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 62.5
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 65.0
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 65.0
MBI01_g15753_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 62.5
MBI04_g09599_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 5.5e-07 57.4 40 62.5
MBI09_g40619_MAGBIO Magnolia biondii HOM05D004763 ORTHO05D019264 5.5e-07 57.4 40 62.5
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 62.5
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 62.5
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 5.5e-07 57.4 40 62.5
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 7.1e-07 57.0 39 59.0
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 60.0
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Lj1A366T12 Lonicera japonica HOM05D004763 ORTHO05D007492 7.1e-07 57.0 37 70.3
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 7.1e-07 57.0 46 58.7
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 62.5
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 7.1e-07 57.0 40 60.0
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 9.3e-07 56.6 40 62.5
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 9.3e-07 56.6 40 62.5
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 9.3e-07 56.6 40 62.5
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 9.3e-07 56.6 40 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.2e-06 56.2 40 60.0
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 1.2e-06 56.2 40 60.0
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 1.6e-06 55.8 40 62.5
MBI02_g24793_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D019264 1.6e-06 55.8 40 62.5
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 1.6e-06 55.8 40 60.0
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 1.6e-06 55.8 40 57.5
SEGI_32015 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 1.6e-06 55.8 40 62.5
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 2.1e-06 55.5 40 57.5
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 2.1e-06 55.5 40 57.5
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 3.5e-06 54.7 40 55.0
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 4.6e-06 54.3 40 60.0
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 4.6e-06 54.3 40 60.0
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 6.0e-06 53.9 39 59.0
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 7.9e-06 53.5 40 57.5

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (4 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings