Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 3.6e-52 208.0 106 100.0
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 5.0e-46 187.6 106 91.5
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 8.5e-46 186.8 106 91.5
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.8e-35 152.5 106 75.5
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 1.3e-33 146.4 106 72.6
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 6.4e-33 144.1 84 84.5
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.7e-31 138.7 84 79.8
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 3.5e-31 138.3 103 68.9
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 6.8e-27 124.0 96 64.6
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.7e-25 118.2 106 61.3
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 1.1e-24 116.7 103 59.2
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.4e-24 114.4 106 60.4
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.4e-24 114.4 106 60.4
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.6e-23 112.8 104 58.7
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 3.5e-23 111.7 105 60.0
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 6.0e-23 110.9 103 57.3
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 7.8e-23 110.5 104 57.7
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 7.8e-23 110.5 106 57.5
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 8.6e-22 107.1 106 58.5
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 5.6e-21 104.4 103 53.4
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 7.3e-21 104.0 103 52.4
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 3.1e-19 98.6 81 59.3
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.1e-19 98.6 106 52.8
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 6.8e-19 97.4 82 57.3
Solyc07g016120.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.5e-18 96.3 59 79.7
Solyc11g028060.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.0e-18 95.9 56 87.5
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 2.2e-17 92.4 85 52.9
Sopen07g005870 Solanum pennellii HOM05D000082 ORTHO05D000038 2.9e-17 92.0 55 85.5
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 3.2e-16 88.6 105 46.7
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 4.1e-16 88.2 107 47.7
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 6.0e-15 84.3 104 41.3
Solyc07g016113.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 6.0e-15 84.3 106 50.0
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.3e-14 82.4 60 61.7
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 6.6e-14 80.9 105 42.9
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.5e-13 79.7 83 53.0
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 6.2e-12 74.3 105 40.0
CAN.G1084.29 Capsicum annuum HOM05D009059 ORTHO05D011207 1.8e-11 72.8 62 54.8
Os02g0172000 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 5.8e-10 67.8 51 52.9
Glyma.08G005300 Glycine max HOM05D001231 ORTHO05D001012 1.9e-08 62.8 59 45.8
Lalb_Chr16g0392501 Lupinus albus HOM05D001231 ORTHO05D001012 3.2e-08 62.0 48 56.2
Psat4g112360 Pisum sativum HOM05D001231 ORTHO05D001012 3.2e-08 62.0 80 42.5
Phvul.002G278700 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 4.1e-08 61.6 71 40.8
MELO3C005214.2 Cucumis melo HOM05D001231 ORTHO05D001012 5.4e-08 61.2 46 54.3
MELO3C005215.2 Cucumis melo HOM05D001231 ORTHO05D001012 5.4e-08 61.2 47 53.2
PGSC0003DMG400015132 Solanum tuberosum HOM05D001231 ORTHO05D001012 5.4e-08 61.2 45 53.3
Glyma.16G100400 Glycine max HOM05D001231 ORTHO05D001012 7.1e-08 60.8 79 38.0
Phvul.003G282500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 7.1e-08 60.8 78 37.2
Psat4g112240 Pisum sativum HOM05D001231 ORTHO05D001012 7.1e-08 60.8 79 44.3
Psat4g112280 Pisum sativum HOM05D001231 ORTHO05D001012 7.1e-08 60.8 45 53.3
PGSC0003DMG400015133 Solanum tuberosum HOM05D001231 ORTHO05D001012 7.1e-08 60.8 45 53.3
Medtr8g070780 Medicago truncatula HOM05D001231 ORTHO05D001012 9.2e-08 60.5 77 37.7
Prupe.1G341700 Prunus persica HOM05D001231 ORTHO05D001012 9.2e-08 60.5 45 51.1
MD13G1011600 Malus domestica HOM05D001231 ORTHO05D001012 2.1e-07 59.3 45 46.7
Sed0025601 Sechium edule HOM05D001231 ORTHO05D001012 2.1e-07 59.3 45 53.3
Medtr3g032570 Medicago truncatula HOM05D001231 ORTHO05D001012 2.7e-07 58.9 80 37.5
Nitab4.5_0000374g0060 Nicotiana tabacum HOM05D001231 ORTHO05D001012 2.7e-07 58.9 79 40.5
Phvul.002G278600 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 2.7e-07 58.9 66 42.4
Prupe.1G341600 Prunus persica HOM05D001231 ORTHO05D001012 2.7e-07 58.9 45 53.3
Manes.18G077612 Manihot esculenta HOM05D001231 ORTHO05D001012 3.5e-07 58.5 45 48.9
Medtr8g070790 Medicago truncatula HOM05D001231 ORTHO05D001012 3.5e-07 58.5 69 39.1
SGA_v2.0_scaffold23G10223 Striga asiatica HOM05D001231 ORTHO05D001012 3.5e-07 58.5 68 45.6
CAN.G458.12 Capsicum annuum HOM05D001231 ORTHO05D001012 4.6e-07 58.2 66 42.4
CAN.G976.4 Capsicum annuum HOM05D001231 ORTHO05D001012 4.6e-07 58.2 80 41.2
MD11G1113600 Malus domestica HOM05D001231 ORTHO05D001012 4.6e-07 58.2 46 50.0
Solyc07g007755.1 Solanum lycopersicum HOM05D001231 ORTHO05D001012 4.6e-07 58.2 79 41.8
Manes.02G163900 Manihot esculenta HOM05D001231 ORTHO05D001012 6.0e-07 57.8 46 52.2
Peaxi162Scf00088g01110 Petunia axillaris HOM05D001231 ORTHO05D001012 6.0e-07 57.8 45 51.1
CAN.G976.6 Capsicum annuum HOM05D001231 ORTHO05D001012 7.8e-07 57.4 66 40.9
CARHR144760 Cardamine hirsuta HOM05D001231 ORTHO05D001012 7.8e-07 57.4 78 39.7
FvH4_4g36102 Fragaria vesca HOM05D001231 ORTHO05D001012 7.8e-07 57.4 45 51.1
FAN07G0709 Fragaria x ananassa HOM05D001231 ORTHO05D001012 7.8e-07 57.4 45 51.1
C03p57970 Brassica napus HOM05D001231 ORTHO05D001012 1.0e-06 57.0 53 43.4
BolC5t30895H Brassica oleracea HOM05D001231 ORTHO05D001012 1.0e-06 57.0 53 43.4
FvH4_3g40491 Fragaria vesca HOM05D001231 ORTHO05D001012 1.0e-06 57.0 69 37.7
FAN22G0227 Fragaria x ananassa HOM05D001231 ORTHO05D001012 1.0e-06 57.0 45 51.1
AT2G31957 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 1.3e-06 56.6 51 43.1
FvH4_4g36104 Fragaria vesca HOM05D001231 ORTHO05D001012 1.3e-06 56.6 45 48.9
MD02G1207600 Malus domestica HOM05D001231 ORTHO05D001012 1.3e-06 56.6 46 50.0
MD13G1011800 Malus domestica HOM05D001231 ORTHO05D001012 1.3e-06 56.6 46 50.0
MD13G1012000 Malus domestica HOM05D001231 ORTHO05D001012 1.3e-06 56.6 46 50.0
MD14G1073000 Malus domestica HOM05D001231 ORTHO05D001012 1.3e-06 56.6 46 50.0
PSO675G5343 Papaver somniferum HOM05D001231 ORTHO05D001012 1.3e-06 56.6 74 36.5
PGSC0003DMG400015129 Solanum tuberosum HOM05D001231 ORTHO05D001012 1.3e-06 56.6 70 38.6
FAN12G0873 Fragaria x ananassa HOM05D001184 ORTHO05D003397 1.7e-06 56.2 72 38.9
MD11G1108800 Malus domestica HOM05D001231 ORTHO05D001012 1.7e-06 56.2 46 47.8
MD13G1011700 Malus domestica HOM05D001231 ORTHO05D001012 1.7e-06 56.2 46 50.0
Os04g0189400 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 1.7e-06 56.2 45 46.7
Psat4g112000 Pisum sativum HOM05D001231 ORTHO05D001012 1.7e-06 56.2 79 39.2
SalBow6G2289 Salvia bowleyana HOM05D001231 ORTHO05D001012 1.7e-06 56.2 66 42.4
Sed0017845 Sechium edule HOM05D001231 ORTHO05D001012 1.7e-06 56.2 68 41.2
Sopen07g003700 Solanum pennellii HOM05D001231 ORTHO05D001012 1.7e-06 56.2 66 40.9
C05p21990 Brassica napus HOM05D001231 ORTHO05D001012 2.3e-06 55.8 53 43.4
CAN.G976.2 Capsicum annuum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 79 39.2
CDE04G2371 Ceratophyllum demersum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 46 45.7
MD02G1301000 Malus domestica HOM05D001231 ORTHO05D001012 2.3e-06 55.8 45 51.1
MD11G1108400 Malus domestica HOM05D001231 ORTHO05D001012 2.3e-06 55.8 46 47.8
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.3e-06 55.8 46 47.8
PSO541G0572 Papaver somniferum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 47 44.7
Peaxi162Scf00025g00313 Petunia axillaris HOM05D001231 ORTHO05D001012 2.3e-06 55.8 67 40.3
RcHm_v2.0_Chr4g0445761 Rosa chinensis HOM05D001231 ORTHO05D001012 2.3e-06 55.8 45 48.9
Solyc07g007730.4 Solanum lycopersicum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 45 48.9
Sopen07g001020 Solanum pennellii HOM05D001231 ORTHO05D001012 2.3e-06 55.8 79 40.5
Sopen07g001060 Solanum pennellii HOM05D001231 ORTHO05D001012 2.3e-06 55.8 45 48.9
Lj4g0025743 Lotus japonicus HOM05D001231 ORTHO05D001012 3.0e-06 55.5 78 35.9
MD16G1009000 Malus domestica HOM05D001231 ORTHO05D001012 3.0e-06 55.5 45 51.1
Hund02692 Selenicereus undatus HOM05D001231 ORTHO05D001012 3.0e-06 55.5 47 40.4
Solyc07g007710.4 Solanum lycopersicum HOM05D001231 ORTHO05D001012 3.0e-06 55.5 66 40.9
PGSC0003DMG400015130 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.0e-06 55.5 78 39.7
Glyma.08G268000 Glycine max HOM05D001231 ORTHO05D001012 3.9e-06 55.1 76 36.8
Gohir.D01G023526 Gossypium hirsutum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 74 40.5
Gorai.002G029700 Gossypium raimondii HOM05D001231 ORTHO05D001012 3.9e-06 55.1 74 40.5
Nitab4.5_0009181g0010 Nicotiana tabacum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 78 38.5
PGSC0003DMG400029484 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 66 40.9
CANSAT78G1068 Cannabis sativa HOM05D001231 ORTHO05D001012 5.1e-06 54.7 45 44.4
Lalb_Chr08g0237751 Lupinus albus HOM05D001231 ORTHO05D001012 5.1e-06 54.7 67 43.3
MBI06_g26879_MAGBIO Magnolia biondii HOM05D001231 ORTHO05D001012 5.1e-06 54.7 45 51.1
Os02g0172300 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 5.1e-06 54.7 68 39.7
Phvul.009G158000 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 5.1e-06 54.7 67 40.3
Phvul.009G158101 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 5.1e-06 54.7 67 41.8
Carub.0005s0116 Capsella rubella HOM05D001231 ORTHO05D001012 6.6e-06 54.3 78 38.5
Carub.0008s2442 Capsella rubella HOM05D001231 ORTHO05D001012 6.6e-06 54.3 68 36.8
Gohir.A01G033800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 6.6e-06 54.3 46 50.0
Gorai.002G029500 Gossypium raimondii HOM05D001231 ORTHO05D001012 6.6e-06 54.3 74 40.5
Medtr8g070770 Medicago truncatula HOM05D001231 ORTHO05D001012 6.6e-06 54.3 79 38.0
Medtr8g075980 Medicago truncatula HOM05D001231 ORTHO05D001012 6.6e-06 54.3 72 38.9
Nitab4.5_0000374g0050 Nicotiana tabacum HOM05D001231 ORTHO05D001012 6.6e-06 54.3 78 38.5
PSO541G3846 Papaver somniferum HOM05D001231 ORTHO05D001012 6.6e-06 54.3 80 37.5
PSO675G6539 Papaver somniferum HOM05D001231 ORTHO05D001012 6.6e-06 54.3 80 37.5
PGSC0003DMG400030676 Solanum tuberosum HOM05D001231 ORTHO05D001012 6.6e-06 54.3 45 48.9
Gohir.D01G023523 Gossypium hirsutum HOM05D001231 ORTHO05D001012 8.6e-06 53.9 72 37.5
Lj4g0007075 Lotus japonicus HOM05D001231 ORTHO05D001012 8.6e-06 53.9 71 33.8
Lalb_Chr12g0202761 Lupinus albus HOM05D001231 ORTHO05D001012 8.6e-06 53.9 70 42.9
Peaxi162Scf00072g01012 Petunia axillaris HOM05D001231 ORTHO05D001012 8.6e-06 53.9 68 39.7
RcHm_v2.0_Chr4g0445791 Rosa chinensis HOM05D001231 ORTHO05D001012 8.6e-06 53.9 45 44.4
RcHm_v2.0_Chr4g0445851 Rosa chinensis HOM05D001231 ORTHO05D001012 8.6e-06 53.9 45 44.4
Hund02690 Selenicereus undatus HOM05D001231 ORTHO05D001012 8.6e-06 53.9 66 37.9
Hund22171 Selenicereus undatus HOM05D001231 ORTHO05D001012 8.6e-06 53.9 69 36.2
Zm00001eb304240 Zea mays HOM05D001231 ORTHO05D001012 8.6e-06 53.9 45 48.9

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (18 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (3 genes)
Glycine max (3 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (11 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (5 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (11 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (4 genes)
Petunia axillaris (7 genes)
Phaseolus vulgaris (5 genes)
Physcomitrium patens (0 genes)
Pisum sativum (4 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (3 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (11 genes)
Solanum pennellii (6 genes)
Solanum tuberosum (6 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings