Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 5.2e-230 800.8 444 100.0
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.1e-219 766.5 433 97.7
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 4.6e-194 681.4 469 82.5
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 1.9e-192 676.0 444 84.0
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.8e-190 669.5 440 81.8
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.0e-189 666.0 459 82.1
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 3.6e-146 522.3 450 64.9
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.4e-142 510.4 304 96.1
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.5e-139 499.6 449 63.3
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 2.0e-136 490.0 449 66.8
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.3e-135 487.3 455 62.2
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 6.4e-135 485.0 454 62.8
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 5.4e-134 481.9 453 64.0
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 9.2e-134 481.1 456 62.1
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 3.0e-132 476.1 456 61.6
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 6.4e-127 458.4 421 62.7
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.5e-125 452.6 445 59.1
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 5.1e-124 448.7 453 62.7
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.9e-123 446.8 393 69.2
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 4.3e-123 445.7 445 59.8
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 3.6e-122 442.6 419 60.4
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 4.7e-122 442.2 450 59.6
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 8.1e-122 441.4 452 63.1
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.8e-121 440.3 447 60.9
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 2.3e-121 439.9 419 59.9
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 3.1e-121 439.5 512 55.1
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 4.0e-121 439.1 378 66.4
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 8.9e-121 438.0 442 62.9
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 1.5e-120 437.2 449 60.8
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 5.8e-120 435.3 450 61.1
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 5.8e-120 435.3 421 61.5
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 7.5e-120 434.9 462 57.6
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 1.3e-119 434.1 447 62.2
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 2.2e-119 433.3 467 57.8
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 2.9e-119 433.0 456 61.0
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 8.3e-119 431.4 451 61.6
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.4e-118 430.6 441 59.0
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.9e-118 430.3 417 59.2
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 3.2e-118 429.5 373 65.1
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 2.7e-117 426.4 454 57.3
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 3.5e-117 426.0 458 58.3
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.9e-116 422.5 390 62.1
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 6.6e-116 421.8 377 64.5
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 1.9e-115 420.2 401 64.8
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 2.5e-115 419.9 462 56.7
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.5e-115 419.9 455 60.2
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 5.6e-115 418.7 453 60.9
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.2e-114 417.5 448 59.2
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 2.8e-114 416.4 452 58.8
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 3.6e-114 416.0 412 58.0
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 6.2e-114 415.2 451 55.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.1e-113 414.5 391 65.7
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 3.1e-113 412.9 444 54.7
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 3.1e-113 412.9 385 61.0
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 8.9e-113 411.4 463 56.6
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 2.6e-112 409.8 452 55.3
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 7.6e-112 408.3 447 54.4
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.1e-110 404.4 442 54.1
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 3.5e-109 399.4 383 58.2
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 4.6e-109 399.1 451 56.8
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 4.6e-109 399.1 467 52.7
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.5e-107 394.0 433 54.3
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.9e-107 393.7 395 60.3
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.5e-107 393.3 377 59.7
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 2.0e-104 383.6 428 54.7
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 3.4e-104 382.9 466 53.0
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 4.4e-104 382.5 430 54.7
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 4.2e-102 375.9 474 54.0
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 4.2e-102 375.9 474 54.0
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 9.3e-102 374.8 446 50.2
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 6.0e-101 372.1 320 69.1
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 1.3e-100 370.9 453 56.1
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.3e-100 370.9 454 50.0
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 5.1e-100 369.0 455 51.0
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.1e-99 367.9 325 68.3
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 2.5e-99 366.7 468 53.0
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.5e-99 366.7 397 56.4
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 7.3e-99 365.2 463 54.6
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 9.6e-99 364.8 465 51.2
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 1.6e-98 364.0 413 53.5
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 2.1e-98 363.6 457 52.7
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 1.8e-97 360.5 439 50.1
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.1e-94 351.3 471 53.1
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 7.1e-94 348.6 472 50.0
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 2.7e-93 346.7 339 62.5
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 4.6e-93 345.9 465 47.3
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 8.7e-92 341.7 444 50.0
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 3.3e-91 339.7 474 49.4
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.8e-90 336.7 457 53.4
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 3.7e-90 336.3 314 66.2
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 8.1e-90 335.1 457 53.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.1e-89 334.7 436 53.0
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 1.4e-89 334.3 376 52.4
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 5.3e-89 332.4 642 38.6
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.2e-88 331.3 412 55.1
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 4.5e-88 329.3 446 52.7
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.7e-87 327.4 391 52.9
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 1.9e-86 323.9 454 52.2
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.5e-86 323.6 391 52.7
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 2.1e-85 320.5 376 50.5
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 3.5e-85 319.7 452 52.0
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 3.9e-84 316.2 594 42.3
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 3.9e-84 316.2 594 42.3
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 1.1e-83 314.7 372 54.8
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 3.3e-83 313.2 369 52.3
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.6e-82 310.8 322 58.7
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 1.1e-81 308.1 378 50.5
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.1e-81 306.6 360 57.8
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 5.3e-81 305.8 463 49.9
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 4.5e-80 302.8 457 50.3
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.4e-78 297.7 336 55.4
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 1.9e-75 287.3 338 58.9
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.6e-74 284.3 311 53.7
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 8.5e-71 271.9 498 41.4
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 3.9e-68 263.1 389 50.9
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 1.1e-67 261.5 386 45.9
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.8e-66 256.9 200 64.5
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 1.1e-65 255.0 216 64.4
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 9.4e-62 241.9 368 43.8
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 2.8e-58 230.3 233 53.6
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 7.0e-57 225.7 291 48.5
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 3.5e-56 223.4 347 51.3
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 1.2e-53 214.9 446 37.4
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 6.7e-52 209.1 119 87.4
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.2e-47 194.1 315 44.4
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 1.9e-46 191.0 102 89.2
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 1.8e-41 174.5 403 40.7
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 3.4e-35 153.7 168 45.2
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.7e-34 150.2 309 40.8
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.4e-28 131.7 176 49.4
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.8e-28 131.3 176 50.6
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 5.2e-28 129.8 67 94.0
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.8e-25 121.3 74 83.8
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 5.4e-25 119.8 221 39.8
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 3.5e-24 117.1 257 30.0
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 5.0e-23 113.2 69 85.5
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 1.1e-22 112.1 161 46.0
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.5e-22 111.7 64 81.2
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.5e-22 110.9 329 41.9
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 8.0e-21 105.9 209 40.7
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 8.6e-15 85.9 47 85.1
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.5e-14 84.3 51 74.5
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 4.4e-11 73.6 65 52.3
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 2.7e-08 64.3 138 26.8
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 2.7e-08 64.3 74 48.6
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 6.0e-08 63.2 52 63.5
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.1e-06 58.9 84 42.9
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 3.3e-06 57.4 51 52.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (3 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (4 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (6 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings