Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017340.1 Solanum lycopersicum HOM05D000001 ORTHO05D389848 4.5e-35 150.6 71 100.0
Sopen11g009290 Solanum pennellii HOM05D000001 ORTHO05D009494 7.3e-25 116.7 63 88.9
PGSC0003DMG402009242 Solanum tuberosum HOM05D000001 ORTHO05D009494 6.2e-24 113.6 63 85.7
Solyc11g017370.3 Solanum lycopersicum HOM05D000001 ORTHO05D009494 1.4e-23 112.5 63 85.7
CAN.G526.10 Capsicum annuum HOM05D000001 ORTHO05D009494 2.0e-22 108.6 63 81.0
Nitab4.5_0010892g0010 Nicotiana tabacum HOM05D000001 ORTHO05D009494 8.3e-21 103.2 63 82.5
Nitab4.5_0000560g0060 Nicotiana tabacum HOM05D000001 ORTHO05D009494 3.2e-20 101.3 63 81.0
Peaxi162Scf00310g00083 Petunia axillaris HOM05D000001 ORTHO05D009494 4.1e-20 100.9 63 81.0
unitig_899.g15355 Utricularia gibba HOM05D000001 ORTHO05D009494 3.1e-15 84.7 66 62.1
Oeu027261.2 Olea europaea HOM05D000001 ORTHO05D009494 4.0e-15 84.3 68 61.8
SGA_v2.0_scaffold2G01357 Striga asiatica HOM05D000001 ORTHO05D009494 5.2e-15 84.0 63 66.7
AUR62003543 Chenopodium quinoa HOM05D000001 ORTHO05D009494 8.9e-15 83.2 52 76.9
AUR62017856 Chenopodium quinoa HOM05D000001 ORTHO05D009494 8.9e-15 83.2 52 76.9
EL10Ac6g15338 Beta vulgaris HOM05D000001 ORTHO05D009494 7.5e-14 80.1 52 73.1
HanXRQChr13g0421851 Helianthus annuus HOM05D000100 ORTHO05D009494 1.3e-13 79.3 54 70.4
SalBow6G2474 Salvia bowleyana HOM05D000001 ORTHO05D009494 2.2e-13 78.6 59 66.1
Cc11_g04660 Coffea canephora HOM05D000001 ORTHO05D009494 2.9e-13 78.2 64 65.6
Lj1P1038T31 Lonicera japonica HOM05D000001 ORTHO05D009494 3.7e-13 77.8 55 69.1
MSTRG.8133 Avicennia marina HOM05D000001 ORTHO05D009494 6.4e-13 77.0 63 63.5
Sc08g0002520 Simmondsia chinensis HOM05D000001 ORTHO05D009494 6.4e-13 77.0 61 67.2
Hund12760 Selenicereus undatus HOM05D000001 ORTHO05D009494 8.3e-13 76.6 52 71.2
Lsat_1_v5_gn_3_119881 Lactuca sativa HOM05D000001 ORTHO05D009494 1.1e-12 76.3 54 64.8
vmacro11196 Vaccinium macrocarpon HOM05D000001 ORTHO05D009494 1.1e-12 76.3 53 67.9
Ah.02g121210 Amaranthus hybridus HOM05D000001 ORTHO05D009494 2.4e-12 75.1 53 67.9
CsaV3_4G032500 Cucumis sativus L. HOM05D000001 ORTHO05D009494 5.4e-12 73.9 69 58.0
Actinidia03867 Actinidia chinensis HOM05D000001 ORTHO05D009494 7.1e-12 73.6 53 67.9
Dinv11349 Davidia involucrata HOM05D000100 ORTHO05D009494 9.2e-12 73.2 53 67.9
TWI60G1389 Tripterygium wilfordii HOM05D000001 ORTHO05D009494 9.2e-12 73.2 57 63.2
Sed0019947 Sechium edule HOM05D000001 ORTHO05D009494 1.2e-11 72.8 63 60.3
Eucgr.K01351 Eucalyptus grandis HOM05D000001 ORTHO05D009494 1.6e-11 72.4 57 59.6
Prupe.3G184500 Prunus persica HOM05D000001 ORTHO05D009494 1.6e-11 72.4 53 64.2
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 1.6e-11 72.4 57 64.9
Ciclev10011066m.g Citrus clementina HOM05D000001 ORTHO05D009494 2.1e-11 72.0 62 58.1
MELO3C032516.2 Cucumis melo HOM05D000001 ORTHO05D009494 2.7e-11 71.6 53 67.9
Migut.F01718 Erythranthe guttata HOM05D000001 ORTHO05D009494 2.7e-11 71.6 59 64.4
CSS0005572 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009494 3.5e-11 71.2 56 60.7
CSS0035538 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009494 3.5e-11 71.2 56 60.7
CARHR098020 Cardamine hirsuta HOM05D000001 ORTHO05D009494 3.5e-11 71.2 59 55.9
Haze_13549 Corylus avellana HOM05D000001 ORTHO05D009494 4.6e-11 70.9 56 58.9
BcaC05g28099 Brassica carinata HOM05D000001 ORTHO05D009494 6.0e-11 70.5 63 54.0
C05p41260 Brassica napus HOM05D000001 ORTHO05D009494 6.0e-11 70.5 63 54.0
BolC5t32868H Brassica oleracea HOM05D000001 ORTHO05D009494 6.0e-11 70.5 63 54.0
Solyc11g017320.3 Solanum lycopersicum HOM05D000001 ORTHO05D390449 6.0e-11 70.5 39 87.2
Thecc.01G174200 Theobroma cacao HOM05D000001 ORTHO05D009494 6.0e-11 70.5 65 53.8
AT3G22150 Arabidopsis thaliana HOM05D000001 ORTHO05D009494 7.8e-11 70.1 60 56.7
CiPaw.03G110200 Carya illinoinensis HOM05D000001 ORTHO05D009494 7.8e-11 70.1 53 64.2
CiPaw.03G110700 Carya illinoinensis HOM05D000001 ORTHO05D009494 7.8e-11 70.1 53 64.2
Duzib133G1443 Durio zibethinus HOM05D000001 ORTHO05D009494 7.8e-11 70.1 65 53.8
Gohir.D07G177300 Gossypium hirsutum HOM05D000001 ORTHO05D009494 7.8e-11 70.1 61 57.4
Gorai.001G198300 Gossypium raimondii HOM05D000001 ORTHO05D009494 7.8e-11 70.1 61 57.4
CANSAT25G2259 Cannabis sativa HOM05D000001 ORTHO05D009494 1.0e-10 69.7 49 65.3
Cfa023360 Carpinus fangiana HOM05D000001 ORTHO05D009494 1.0e-10 69.7 56 57.1
Sabra06G0006100 Salix brachista HOM05D000001 ORTHO05D009494 1.0e-10 69.7 53 60.4
Atru.BG.220.p Acer truncatum HOM05D000001 ORTHO05D009494 1.3e-10 69.3 61 60.7
Gohir.A07G164856 Gossypium hirsutum HOM05D000001 ORTHO05D009494 1.3e-10 69.3 61 57.4
MD09G1141900 Malus domestica HOM05D000001 ORTHO05D009494 1.3e-10 69.3 49 65.3
Nn1g09315 Nelumbo nucifera HOM05D000001 ORTHO05D009494 1.3e-10 69.3 62 58.1
Aa31LG8G8710 Aethionema arabicum HOM05D000001 ORTHO05D009494 1.7e-10 68.9 52 61.5
Aqoxy1G02917 Aquilegia oxysepala HOM05D000001 ORTHO05D009494 1.7e-10 68.9 56 58.9
PGR102G2228 Punica granatum HOM05D000001 ORTHO05D009494 1.7e-10 68.9 53 62.3
RcHm_v2.0_Chr2g0153281 Rosa chinensis HOM05D000001 ORTHO05D009494 1.7e-10 68.9 56 58.9
Cpa.g.sc8.267 Carica papaya HOM05D000001 ORTHO05D009494 2.3e-10 68.6 52 65.4
Hma1.2p1_1222F.1_g268290 Hydrangea macrophylla HOM05D000001 ORTHO05D009494 2.3e-10 68.6 53 60.4
Potri.006G007800 Populus trichocarpa HOM05D000001 ORTHO05D009494 2.3e-10 68.6 53 58.5
AL3G36340 Arabidopsis lyrata HOM05D000001 ORTHO05D009494 3.0e-10 68.2 61 54.1
Carub.0003s2232 Capsella rubella HOM05D000001 ORTHO05D009494 3.0e-10 68.2 57 54.4
TAR381G0203 Trochodendron aralioides HOM05D000001 ORTHO05D009494 3.9e-10 67.8 53 60.4
BcaB06g26313 Brassica carinata HOM05D000001 ORTHO05D009494 5.1e-10 67.4 52 59.6
MD09G1141400 Malus domestica HOM05D000001 ORTHO05D009494 5.1e-10 67.4 55 60.0
Manes.09G070519 Manihot esculenta HOM05D000001 ORTHO05D009494 5.1e-10 67.4 57 57.9
PSO063G6162 Papaver somniferum HOM05D000001 ORTHO05D009494 5.1e-10 67.4 53 60.4
PSO782G2739 Papaver somniferum HOM05D000001 ORTHO05D009494 5.1e-10 67.4 53 60.4
BraA05t21544Z Brassica rapa HOM05D000001 ORTHO05D009494 6.6e-10 67.0 52 59.6
THA.LOC104808509 Tarenaya hassleriana HOM05D000001 ORTHO05D009494 8.6e-10 66.6 64 50.0
Thhalv10020073m.g Eutrema salsugineum HOM05D000001 ORTHO05D009494 1.1e-09 66.2 52 57.7
Sp3g19960 Schrenkiella parvula HOM05D000001 ORTHO05D009494 1.1e-09 66.2 52 57.7
QL04p063285 Quercus lobata HOM05D000001 ORTHO05D009494 1.5e-09 65.9 53 60.4
COL.COLO4_19982 Corchorus olitorius HOM05D000001 ORTHO05D009494 2.5e-09 65.1 57 57.9
Lalb_Chr04g0247031 Lupinus albus HOM05D000001 ORTHO05D009494 2.5e-09 65.1 56 62.5
Phvul.008G290100 Phaseolus vulgaris HOM05D000001 ORTHO05D009494 9.5e-09 63.2 53 60.4
Medtr5g098860 Medicago truncatula HOM05D000001 ORTHO05D009494 2.1e-08 62.0 53 62.3
FAN13G2276 Fragaria x ananassa HOM05D000001 ORTHO05D009494 3.6e-08 61.2 49 59.2
Psat2g001640 Pisum sativum HOM05D000001 ORTHO05D009494 1.4e-07 59.3 53 58.5
FvH4_5g30430 Fragaria vesca HOM05D000001 ORTHO05D009494 1.8e-07 58.9 49 57.1
FAN18G1238 Fragaria x ananassa HOM05D000001 ORTHO05D009494 1.8e-07 58.9 49 57.1
Glyma.02G309700 Glycine max HOM05D000001 ORTHO05D009494 1.8e-07 58.9 53 60.4
GSVIVG01000968001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.8e-07 58.9 61 37.7
Glyma.14G003000 Glycine max HOM05D000001 ORTHO05D009494 2.4e-07 58.5 53 58.5
Aqoxy6G01162 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 4.0e-07 57.8 57 49.1
FAN08G2373 Fragaria x ananassa HOM05D000001 ORTHO05D009494 4.0e-07 57.8 48 58.3
TPR.G33477 Trifolium pratense HOM05D000001 ORTHO05D009494 5.2e-07 57.4 55 56.4
Ca_06493_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009494 6.8e-07 57.0 54 55.6
LjContig00081g0014444 Lotus japonicus HOM05D000001 ORTHO05D009494 6.8e-07 57.0 58 53.4
Cc07_g15840 Coffea canephora HOM05D000001 ORTHO05D009295 8.9e-07 56.6 50 50.0
Sopen03g033060 Solanum pennellii HOM05D000001 ORTHO05D000003 8.9e-07 56.6 62 41.9
Actinidia30600 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.5e-06 55.8 56 41.1
Potri.007G021700 Populus trichocarpa HOM05D000001 ORTHO05D000003 1.5e-06 55.8 65 43.1
QL03p050084 Quercus lobata HOM05D000001 ORTHO05D000003 1.5e-06 55.8 59 39.0
DCAR_006349 Daucus carota HOM05D000001 ORTHO05D000003 2.0e-06 55.5 46 50.0
Sopen04g023880 Solanum pennellii HOM05D000117 ORTHO05D000070 2.0e-06 55.5 51 49.0
TPR.G15555 Trifolium pratense HOM05D000001 ORTHO05D000003 2.0e-06 55.5 55 47.3
Os05g0439300 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D000003 2.6e-06 55.1 52 46.2
Solyc03g114010.3 Solanum lycopersicum HOM05D000001 ORTHO05D000003 2.6e-06 55.1 60 40.0
PGSC0003DMG400024482 Solanum tuberosum HOM05D000001 ORTHO05D000003 2.6e-06 55.1 55 43.6
CANSAT01G0165 Cannabis sativa HOM05D000001 ORTHO05D000003 3.4e-06 54.7 57 49.1
CANSAT01G0785 Cannabis sativa HOM05D000001 ORTHO05D000003 3.4e-06 54.7 57 49.1
Lj5C111T13 Lonicera japonica HOM05D000001 ORTHO05D013776 3.4e-06 54.7 54 46.3
CSS0005729 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D006238 4.4e-06 54.3 48 45.8
FvH4_4g22970 Fragaria vesca HOM05D000001 ORTHO05D000003 4.4e-06 54.3 59 35.6
FAN12G2372 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.4e-06 54.3 59 35.6
FAN17G1545 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.4e-06 54.3 59 35.6
MBI01_g11648_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 4.4e-06 54.3 48 41.7
Nitab4.5_0009569g0020 Nicotiana tabacum HOM05D000001 ORTHO05D000003 4.4e-06 54.3 60 40.0
Sabra07G0018800 Salix brachista HOM05D000001 ORTHO05D000003 4.4e-06 54.3 65 41.5
SGA_v2.0_scaffold10G05181 Striga asiatica HOM05D000001 ORTHO05D022897 4.4e-06 54.3 58 44.8
GSVIVG01019408001 Vitis vinifera HOM05D000001 ORTHO05D000003 4.4e-06 54.3 53 41.5
Aqoxy6G01638 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 5.8e-06 53.9 56 42.9
Cpa.g.sc7.223 Carica papaya HOM05D000001 ORTHO05D000003 5.8e-06 53.9 50 42.0
Cfa009428 Carpinus fangiana HOM05D000001 ORTHO05D000003 5.8e-06 53.9 59 39.0
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 5.8e-06 53.9 56 42.9
Prupe.1G218200 Prunus persica HOM05D000001 ORTHO05D000003 5.8e-06 53.9 59 39.0
Actinidia04902 Actinidia chinensis HOM05D000001 ORTHO05D009295 7.6e-06 53.5 48 47.9
Actinidia39525 Actinidia chinensis HOM05D000001 ORTHO05D006238 7.6e-06 53.5 48 43.8
AagrBONN_evm.TU.Sc2ySwM_344.3292 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.6e-06 53.5 55 49.1
arahy.Tifrunner.gnm1.ann1.7B1BNL Arachis hypogaea HOM05D000001 ORTHO05D000003 7.6e-06 53.5 55 43.6
Haze_12479 Corylus avellana HOM05D000001 ORTHO05D000003 7.6e-06 53.5 59 37.3
MD03G1042100 Malus domestica HOM05D000001 ORTHO05D011563 7.6e-06 53.5 55 43.6
Psat7g000440 Pisum sativum HOM05D000001 ORTHO05D000003 7.6e-06 53.5 51 45.1
Rhsim12G0018300 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.6e-06 53.5 61 36.1
RcHm_v2.0_Chr7g0181221 Rosa chinensis HOM05D000001 ORTHO05D000003 7.6e-06 53.5 48 43.8
ATR0188G021 Amborella trichopoda HOM05D000001 ORTHO05D038315 9.9e-06 53.1 48 45.8
AagrBONN_evm.TU.Sc2ySwM_228.1594 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.9e-06 53.1 55 43.6
Aqoxy1G01572 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 9.9e-06 53.1 56 41.1
arahy.Tifrunner.gnm1.ann1.Q8WFXK Arachis hypogaea HOM05D000001 ORTHO05D009494 9.9e-06 53.1 55 54.5
EL10Ac6g13335 Beta vulgaris HOM05D000001 ORTHO05D010781 9.9e-06 53.1 47 46.8
CSS0011746 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 9.9e-06 53.1 56 41.1
HanXRQChr14g0462951 Helianthus annuus HOM05D000001 ORTHO05D000003 9.9e-06 53.1 50 46.0
Manes.01G138200 Manihot esculenta HOM05D000001 ORTHO05D000003 9.9e-06 53.1 58 43.1
Nn8g39300 Nelumbo nucifera HOM05D000001 ORTHO05D009069 9.9e-06 53.1 47 42.6
RcHm_v2.0_Chr4g0429241 Rosa chinensis HOM05D000001 ORTHO05D000003 9.9e-06 53.1 59 39.0
SEGI_00657 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 9.9e-06 53.1 56 41.1

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (4 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (3 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (3 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings