Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017200.2 Solanum lycopersicum HOM05D006403 ORTHO05D008130 7.2e-173 610.5 320 100.0
Sopen11g009110 Solanum pennellii HOM05D006403 ORTHO05D008130 2.4e-168 595.5 320 97.8
PGSC0003DMG400009235 Solanum tuberosum HOM05D006403 ORTHO05D008130 1.1e-165 586.6 320 96.2
CAN.G61.29 Capsicum annuum HOM05D006403 ORTHO05D008130 8.6e-150 533.9 320 88.4
Nitab4.5_0000159g0220 Nicotiana tabacum HOM05D006403 ORTHO05D008130 5.2e-147 524.6 320 86.6
Peaxi162Scf00495g00011 Petunia axillaris HOM05D006403 ORTHO05D008130 9.2e-136 487.3 322 84.2
Dinv41688 Davidia involucrata HOM05D006403 ORTHO05D008130 3.8e-105 385.6 269 74.0
Cc00_g04840 Coffea canephora HOM05D006403 ORTHO05D008130 6.7e-102 374.8 321 65.1
SGA_v2.0_scaffold24G10549 Striga asiatica HOM05D006403 ORTHO05D008130 5.7e-101 371.7 330 63.6
Actinidia29416 Actinidia chinensis HOM05D006403 ORTHO05D008130 7.4e-101 371.3 306 67.6
Sc23g0004870 Simmondsia chinensis HOM05D006403 ORTHO05D008130 7.4e-101 371.3 303 67.3
CSS0028864 Camellia sinensis var. sinensis HOM05D006403 ORTHO05D008130 9.6e-101 370.9 271 73.8
Rhsim08G0049700 Rhododendron simsii HOM05D006403 ORTHO05D008130 9.6e-101 370.9 248 77.4
Oeu017876.2 Olea europaea HOM05D006403 ORTHO05D008130 4.8e-100 368.6 295 68.5
GSVIVG01034503001 Vitis vinifera HOM05D006403 ORTHO05D008130 6.9e-99 364.8 318 65.1
Nn8g40759 Nelumbo nucifera HOM05D006403 ORTHO05D008130 2.6e-98 362.8 217 84.3
MSTRG.25437 Avicennia marina HOM05D006403 ORTHO05D008130 7.6e-98 361.3 298 67.1
Ciclev10001887m.g Citrus clementina HOM05D006403 ORTHO05D008130 1.7e-97 360.1 220 84.1
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 8.5e-97 357.8 253 72.3
Potri.013G114500 Populus trichocarpa HOM05D006403 ORTHO05D008130 1.1e-96 357.5 220 84.1
COL.COLO4_36653 Corchorus olitorius HOM05D006403 ORTHO05D008130 1.4e-96 357.1 254 74.8
ClCG09G010420 Citrullus lanatus HOM05D006403 ORTHO05D008130 9.3e-96 354.4 222 81.5
PGR042G3834 Punica granatum HOM05D006403 ORTHO05D008130 1.2e-95 354.0 220 83.6
CsaV3_7G024130 Cucumis sativus L. HOM05D006403 ORTHO05D008130 2.1e-95 353.2 222 81.5
Lj7A297T43 Lonicera japonica HOM05D006403 ORTHO05D008130 3.6e-95 352.4 251 74.9
MELO3C023667.2 Cucumis melo HOM05D006403 ORTHO05D008130 4.6e-95 352.1 222 81.1
CiPaw.16G062500 Carya illinoinensis HOM05D006403 ORTHO05D008130 6.1e-95 351.7 229 78.6
SalBow7G4031 Salvia bowleyana HOM05D006403 ORTHO05D008130 7.9e-95 351.3 215 84.2
AUR62013765 Chenopodium quinoa HOM05D006403 ORTHO05D008130 1.0e-94 350.9 246 74.4
AUR62023390 Chenopodium quinoa HOM05D006403 ORTHO05D008130 1.0e-94 350.9 223 79.8
Gohir.D13G125700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 1.0e-94 350.9 217 83.4
Gorai.013G140800 Gossypium raimondii HOM05D006403 ORTHO05D008130 1.0e-94 350.9 217 83.4
CANSAT78G0580 Cannabis sativa HOM05D006403 ORTHO05D008130 1.3e-94 350.5 239 75.3
Eucgr.F02626 Eucalyptus grandis HOM05D006403 ORTHO05D008130 1.3e-94 350.5 230 80.0
Potri.019G085200 Populus trichocarpa HOM05D006403 ORTHO05D008130 1.3e-94 350.5 216 83.8
Atru.chr13.1807 Acer truncatum HOM05D006403 ORTHO05D008130 3.9e-94 349.0 233 77.7
Atru.chr13.1815 Acer truncatum HOM05D006403 ORTHO05D008130 3.9e-94 349.0 233 77.7
Cfa018202 Carpinus fangiana HOM05D006403 ORTHO05D008130 5.1e-94 348.6 229 78.6
Duzib177G0036 Durio zibethinus HOM05D006403 ORTHO05D008130 5.1e-94 348.6 220 81.4
Hma1.2p1_0072F.1_g038220 Hydrangea macrophylla HOM05D006403 ORTHO05D008130 8.7e-94 347.8 239 76.2
Thecc.08G202600 Theobroma cacao HOM05D006403 ORTHO05D008130 1.5e-93 347.1 229 79.5
Manes.18G099900 Manihot esculenta HOM05D006403 ORTHO05D008130 2.5e-93 346.3 220 82.7
QL02p034075 Quercus lobata HOM05D006403 ORTHO05D008130 2.5e-93 346.3 217 81.1
Haze_17907 Corylus avellana HOM05D006403 ORTHO05D008130 7.4e-93 344.7 229 77.7
Migut.C01242 Erythranthe guttata HOM05D006403 ORTHO05D008130 7.4e-93 344.7 321 61.4
TWI32G0485 Tripterygium wilfordii HOM05D006403 ORTHO05D008130 7.4e-93 344.7 217 81.6
ECA233G3842 Erigeron canadensis HOM05D006403 ORTHO05D008130 9.7e-93 344.4 222 78.8
Sed0020052 Sechium edule HOM05D006403 ORTHO05D008130 9.7e-93 344.4 217 80.2
Hund27413 Selenicereus undatus HOM05D006403 ORTHO05D008130 9.7e-93 344.4 232 77.6
EL10Ac1g00740 Beta vulgaris HOM05D006403 ORTHO05D008130 3.7e-92 342.4 223 77.6
Gohir.A13G121700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 3.7e-92 342.4 318 61.9
Aqoxy7G00855 Aquilegia oxysepala HOM05D006403 ORTHO05D008130 6.3e-92 341.7 261 68.6
Oeu000555.1 Olea europaea HOM05D006403 ORTHO05D008130 1.4e-91 340.5 258 71.7
Lsat_1_v5_gn_1_12940 Lactuca sativa HOM05D006403 ORTHO05D008130 1.8e-91 340.1 255 72.2
MBI17_g12885_MAGBIO Magnolia biondii HOM05D006403 ORTHO05D008130 6.9e-91 338.2 277 65.0
Sabra13G0096800 Salix brachista HOM05D005981 ORTHO05D008130 6.9e-91 338.2 224 79.5
vmacro18286 Vaccinium macrocarpon HOM05D006403 ORTHO05D008130 9.1e-91 337.8 371 55.3
PSO732G0029 Papaver somniferum HOM05D006403 ORTHO05D008130 2.0e-90 336.7 214 78.5
HanXRQChr02g0040151 Helianthus annuus HOM05D006403 ORTHO05D008130 2.6e-90 336.3 223 77.6
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 4.5e-90 335.5 248 73.4
Prupe.7G018000 Prunus persica HOM05D006403 ORTHO05D008130 1.0e-89 334.3 246 70.3
PSO675G8117 Papaver somniferum HOM05D006403 ORTHO05D008130 2.2e-89 333.2 214 77.1
arahy.Tifrunner.gnm1.ann1.RC57KJ Arachis hypogaea HOM05D006403 ORTHO05D008130 2.9e-89 332.8 321 60.4
FAN23G0108 Fragaria x ananassa HOM05D006403 ORTHO05D008130 2.9e-89 332.8 218 77.1
RcHm_v2.0_Chr3g0495761 Rosa chinensis HOM05D006403 ORTHO05D008130 3.8e-89 332.4 218 76.6
THA.LOC104800111 Tarenaya hassleriana HOM05D006403 ORTHO05D008130 3.8e-89 332.4 278 67.3
ATR1127G194 Amborella trichopoda HOM05D006403 ORTHO05D008130 5.0e-89 332.0 219 76.3
FvH4_1g29740 Fragaria vesca HOM05D006403 ORTHO05D008130 5.0e-89 332.0 218 76.6
FAN19G1279 Fragaria x ananassa HOM05D006403 ORTHO05D008130 5.0e-89 332.0 218 76.6
FAN28G0939 Fragaria x ananassa HOM05D006403 ORTHO05D008130 6.5e-89 331.6 218 76.6
A09p42040 Brassica napus HOM05D006403 ORTHO05D008130 1.4e-88 330.5 220 79.5
FAN26G2688 Fragaria x ananassa HOM05D006403 ORTHO05D008130 1.4e-88 330.5 218 76.6
C05p21830 Brassica napus HOM05D006403 ORTHO05D008130 1.9e-88 330.1 220 79.5
BolC5t30876H Brassica oleracea HOM05D006403 ORTHO05D008130 3.2e-88 329.3 220 79.1
Lalb_Chr01g0010051 Lupinus albus HOM05D006403 ORTHO05D008130 3.2e-88 329.3 236 72.9
BraA09t39690Z Brassica rapa HOM05D006403 ORTHO05D008130 4.2e-88 328.9 220 79.5
Thhalv10008318m.g Eutrema salsugineum HOM05D006403 ORTHO05D008130 7.2e-88 328.2 204 82.4
Carub.0001s2222 Capsella rubella HOM05D006403 ORTHO05D008130 9.4e-88 327.8 204 82.4
Duzib116G0580 Durio zibethinus HOM05D006403 ORTHO05D008130 9.4e-88 327.8 223 77.1
Lj5g0000123 Lotus japonicus HOM05D006403 ORTHO05D008130 1.2e-87 327.4 215 78.1
Aa31LG7G6600 Aethionema arabicum HOM05D006403 ORTHO05D008130 1.6e-87 327.0 204 82.4
Lalb_Chr19g0129801 Lupinus albus HOM05D006403 ORTHO05D008130 1.6e-87 327.0 217 76.0
Sp1g20210 Schrenkiella parvula HOM05D006403 ORTHO05D008130 1.6e-87 327.0 268 66.8
AT1G22700 Arabidopsis thaliana HOM05D006403 ORTHO05D008130 2.1e-87 326.6 220 78.2
AL1G36240 Arabidopsis lyrata HOM05D006403 ORTHO05D008130 4.6e-87 325.5 220 78.2
arahy.Tifrunner.gnm1.ann1.3A12IQ Arachis hypogaea HOM05D006403 ORTHO05D008130 7.9e-87 324.7 320 59.1
BcaB03g14190 Brassica carinata HOM05D006403 ORTHO05D008130 3.0e-86 322.8 218 77.1
A07p14250 Brassica napus HOM05D006403 ORTHO05D008130 3.0e-86 322.8 220 77.3
BraA07t29182Z Brassica rapa HOM05D006403 ORTHO05D008130 6.7e-86 321.6 218 76.6
Glyma.20G176400 Glycine max HOM05D006403 ORTHO05D008130 1.1e-85 320.9 214 77.1
Phvul.007G090400 Phaseolus vulgaris HOM05D006403 ORTHO05D008130 1.1e-85 320.9 214 76.6
Glyma.10G215300 Glycine max HOM05D006403 ORTHO05D008130 1.5e-85 320.5 214 77.1
Medtr1g096230 Medicago truncatula HOM05D006403 ORTHO05D008130 1.5e-85 320.5 218 74.8
C07p20970 Brassica napus HOM05D006403 ORTHO05D008130 2.6e-85 319.7 271 65.7
Ca_10605_v3 Cicer arietinum L. HOM05D006403 ORTHO05D008130 2.6e-85 319.7 215 75.8
MD12G1013600 Malus domestica HOM05D006403 ORTHO05D008130 2.6e-85 319.7 244 68.4
MD14G1011000 Malus domestica HOM05D006403 ORTHO05D008130 4.4e-85 318.9 230 72.2
CDE07G1616 Ceratophyllum demersum HOM05D006403 ORTHO05D008130 7.4e-85 318.2 190 83.7
CARHR023070 Cardamine hirsuta HOM05D006403 ORTHO05D008130 9.7e-85 317.8 253 67.6
HPP92_025360 Vanilla planifolia HOM05D006403 ORTHO05D008130 1.7e-84 317.0 215 73.5
Psat6g186640 Pisum sativum HOM05D006403 ORTHO05D008130 2.2e-84 316.6 217 74.2
BcaC06g34984 Brassica carinata HOM05D006403 ORTHO05D008130 7.7e-82 308.1 202 78.7
BolC7t42628H Brassica oleracea HOM05D006403 ORTHO05D008130 2.2e-81 306.6 202 78.2
Cpa.g.sc66.55 Carica papaya HOM05D006403 ORTHO05D008130 1.8e-78 297.0 163 90.8
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 6.3e-76 288.5 224 67.9
unitig_747.g21467 Utricularia gibba HOM05D006403 ORTHO05D008130 5.3e-75 285.4 223 70.4
Zm00001eb320270 Zea mays HOM05D006403 ORTHO05D008130 4.2e-72 275.8 208 68.3
SEGI_04324 Sequoiadendron giganteum HOM05D006403 ORTHO05D008130 1.4e-70 270.8 207 65.7
BcaB03g14188 Brassica carinata HOM05D006403 ORTHO05D008130 2.0e-66 256.9 257 58.8
Pp3c2_18600 Physcomitrium patens HOM05D006403 ORTHO05D008130 4.4e-61 239.2 190 62.6
AagrBONN_evm.TU.Sc2ySwM_362.2277 Anthoceros agrestis HOM05D006403 ORTHO05D008130 5.7e-61 238.8 182 63.7
TPR.G1762 Trifolium pratense HOM05D006403 ORTHO05D008130 5.7e-61 238.8 141 81.6
Mapoly0015s0041 Marchantia polymorpha HOM05D006403 ORTHO05D008130 3.1e-51 206.5 281 44.8
Pp3c1_20680 Physcomitrium patens HOM05D006403 ORTHO05D008130 1.3e-49 201.1 165 59.4
CBR_g38402 Chara braunii HOM05D006403 ORTHO05D008130 1.7e-49 200.7 225 50.2
SMO118G0451 Selaginella moellendorffii HOM05D006403 ORTHO05D008130 6.1e-47 192.2 181 52.5
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 1.4e-46 191.0 133 75.2
MCO16G319 Micromonas commoda HOM05D006403 ORTHO05D008130 8.3e-44 181.8 176 50.0
Cre12.g524300 Chlamydomonas reinhardtii HOM05D006403 ORTHO05D008130 2.0e-42 177.2 222 45.0
RcHm_v2.0_Chr7g0219671 Rosa chinensis HOM05D006403 ORTHO05D008130 9.5e-40 168.3 141 63.8
RcHm_v2.0_Chr2g0092511 Rosa chinensis HOM05D006403 ORTHO05D008130 1.7e-33 147.5 156 55.1
PRCOL_00002033 Prasinoderma coloniale HOM05D006403 ORTHO05D008130 5.1e-25 119.4 150 40.0
RcHm_v2.0_Chr7g0199541 Rosa chinensis HOM05D006403 ORTHO05D008130 9.5e-24 115.2 65 86.2
Hma1.2p1_0072F.1_g038240 Hydrangea macrophylla HOM05D006403 ORTHO05D228046 9.9e-21 105.1 109 57.8
Os08g0347500 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 1.5e-16 91.3 53 83.0
TPR.G20530 Trifolium pratense HOM05D006403 ORTHO05D008130 7.3e-16 89.0 75 65.3
DCAR_019223 Daucus carota HOM05D001558 ORTHO05D021140 6.9e-06 55.8 73 32.9

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (4 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings