Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 0.0e+00 1097.0 553 100.0
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 1.5e-282 975.7 497 98.8
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 4.9e-278 960.7 554 87.7
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 6.7e-275 950.3 497 96.4
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 8.8e-243 843.6 527 80.8
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 2.9e-238 828.6 515 81.0
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 5.5e-237 824.3 546 75.3
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 4.7e-236 821.2 545 76.0
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 2.3e-235 818.9 546 74.9
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 5.2e-235 817.8 543 76.1
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 6.7e-235 817.4 546 74.7
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 4.2e-229 798.1 543 74.2
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 1.6e-228 796.2 539 75.1
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 6.1e-228 794.3 546 74.2
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 2.6e-226 788.9 542 74.2
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 5.7e-226 787.7 535 74.4
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 7.5e-226 787.3 541 72.8
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 7.5e-226 787.3 545 73.8
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 1.3e-225 786.6 536 73.1
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 1.8e-224 782.7 535 73.8
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 7.0e-224 780.8 535 74.2
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 1.2e-223 780.0 546 71.2
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 1.6e-223 779.6 542 74.0
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 2.0e-223 779.2 549 72.9
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 3.5e-223 778.5 546 71.6
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 4.5e-223 778.1 539 73.8
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 1.0e-222 776.9 544 72.2
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 1.3e-222 776.5 534 74.5
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 2.9e-222 775.4 545 71.2
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 3.8e-222 775.0 539 71.1
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 5.5e-221 771.2 546 70.1
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 1.6e-220 769.6 526 73.8
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 3.6e-220 768.5 544 71.7
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 8.0e-220 767.3 535 72.9
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 8.0e-220 767.3 527 72.9
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 1.4e-219 766.5 543 70.7
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 1.8e-219 766.1 544 72.6
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 1.8e-219 766.1 544 72.6
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 1.8e-219 766.1 544 72.6
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 2.3e-219 765.8 537 73.0
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 4.0e-219 765.0 541 70.6
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 4.0e-219 765.0 546 70.3
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 4.0e-219 765.0 541 70.6
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 1.5e-218 763.1 544 72.6
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 2.6e-218 762.3 526 73.0
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 4.4e-218 761.5 484 78.5
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 7.5e-218 760.8 542 72.5
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 2.8e-217 758.8 541 71.2
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 2.8e-217 758.8 541 71.9
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 3.1e-216 755.4 527 72.3
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 3.1e-216 755.4 531 71.9
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 4.5e-215 751.5 527 71.9
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 4.5e-215 751.5 513 72.9
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 1.0e-214 750.4 542 70.8
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 2.9e-214 748.8 529 72.0
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 1.5e-213 746.5 542 70.7
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 1.9e-213 746.1 540 70.9
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 2.5e-213 745.7 542 70.7
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 2.5e-213 745.7 542 70.7
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 4.2e-213 745.0 542 71.0
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 5.5e-213 744.6 542 70.8
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 7.2e-213 744.2 531 69.7
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 1.2e-212 743.4 539 70.7
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 1.6e-212 743.0 539 67.9
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 2.1e-212 742.7 541 71.0
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 2.8e-212 742.3 530 70.6
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 3.6e-212 741.9 542 69.9
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 1.4e-211 740.0 542 70.1
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 1.4e-211 740.0 542 70.1
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 2.3e-211 739.2 542 69.9
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 2.3e-211 739.2 495 74.7
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 3.0e-211 738.8 542 69.7
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 3.0e-211 738.8 530 68.9
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 3.0e-211 738.8 529 69.0
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 5.2e-211 738.0 539 70.1
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 8.9e-211 737.3 544 68.2
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 1.5e-210 736.5 538 70.1
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 4.4e-210 734.9 530 68.7
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 9.8e-210 733.8 544 68.0
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 2.2e-209 732.6 544 67.8
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 2.8e-209 732.3 544 68.8
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 2.8e-209 732.3 474 76.2
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 1.4e-208 729.9 547 67.1
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 1.6e-207 726.5 541 67.1
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 2.7e-207 725.7 544 66.4
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 4.5e-207 724.9 543 68.7
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 1.3e-206 723.4 546 68.3
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 2.3e-206 722.6 548 67.7
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 3.9e-206 721.8 548 65.5
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 2.5e-205 719.2 544 65.8
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 7.3e-205 717.6 544 64.7
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 6.1e-204 714.5 540 66.9
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 1.0e-203 713.8 538 66.5
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.0e-203 713.8 534 67.8
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 1.4e-203 713.4 544 64.3
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.8e-203 713.0 532 68.0
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 3.1e-203 712.2 538 66.4
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 2.6e-202 709.1 529 66.7
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 2.2e-201 706.1 530 65.8
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 1.0e-198 697.2 546 66.1
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.3e-198 696.0 461 76.1
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 3.0e-198 695.7 555 63.8
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 3.0e-198 695.7 535 67.9
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 1.2e-196 690.3 520 66.0
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 6.8e-195 684.5 447 76.1
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 1.2e-194 683.7 532 66.2
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 3.7e-193 678.7 471 70.3
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 4.1e-192 675.2 482 69.3
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 2.7e-191 672.5 541 61.6
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 5.1e-182 641.7 540 59.3
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 2.1e-180 636.3 438 72.1
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 2.8e-180 636.0 526 60.8
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 1.2e-178 630.6 542 58.7
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 7.6e-178 627.9 551 57.4
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 4.6e-175 618.6 414 73.9
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 2.4e-171 606.3 396 74.5
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 4.4e-170 602.1 536 58.6
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 5.8e-170 601.7 396 76.0
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 2.5e-165 586.3 531 58.2
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 5.6e-165 585.1 471 62.4
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 1.8e-158 563.5 402 68.9
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 2.7e-151 539.7 390 67.7
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 3.8e-145 519.2 323 78.3
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 8.4e-145 518.1 372 69.4
AUR62021848 Chenopodium quinoa HOM05D004898 ORTHO05D005574 1.8e-131 473.8 359 66.9
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 9.1e-131 471.5 340 68.5
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 2.9e-129 466.5 473 49.3
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 8.5e-129 464.9 558 45.5
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 6.1e-127 458.8 464 49.1
Nitab4.5_0003626g0040 Nicotiana tabacum HOM05D004898 ORTHO05D005574 7.0e-115 418.7 258 82.2
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 2.9e-113 413.3 513 42.1
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 4.8e-108 396.0 517 40.0
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 4.4e-101 372.9 227 82.4
BcaC06g31368 Brassica carinata HOM05D004898 ORTHO05D005574 1.5e-69 268.1 200 66.5
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 1.1e-67 261.9 180 73.9
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 1.2e-63 248.4 152 82.9
FAN22G1464 Fragaria x ananassa HOM05D004898 ORTHO05D005574 8.9e-62 242.3 197 63.5
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 6.4e-60 236.1 173 66.5
CSS0039577 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 5.8e-53 213.0 149 74.5
vmacro03636 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 2.4e-46 191.0 137 69.3
MD10G1332700 Malus domestica HOM05D004898 ORTHO05D005574 2.2e-44 184.5 159 61.0
TPR.G39985 Trifolium pratense HOM05D004898 ORTHO05D005574 8.4e-44 182.6 170 55.9
TPR.G16605 Trifolium pratense HOM05D004898 ORTHO05D005574 7.4e-40 169.5 140 61.4
CiPaw.02G047500 Carya illinoinensis HOM05D004898 ORTHO05D005574 1.0e-33 149.1 96 75.0
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 8.7e-33 146.0 150 52.7
SEGI_30483 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 5.5e-27 126.7 110 58.2
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 5.3e-22 110.2 71 74.6
Cfa025410 Carpinus fangiana HOM05D004898 ORTHO05D005574 4.2e-19 100.5 502 24.5
MD10G1333600 Malus domestica HOM05D004898 ORTHO05D005574 6.1e-18 96.7 75 65.3
Cre06.g251650 Chlamydomonas reinhardtii HOM05D004898 ORTHO05D005574 6.7e-17 93.2 496 24.0
SEGI_07134 Sequoiadendron giganteum HOM05D001687 ORTHO05D001608 5.9e-13 80.1 67 55.2
SEGI_26459 Sequoiadendron giganteum HOM05D000824 ORTHO05D001608 5.9e-13 80.1 67 55.2
VMungo1383G2427 Vigna mungo HOM05D035140 ORTHO05D005574 2.0e-08 65.1 46 67.4
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 3.7e-07 60.8 46 60.9
Zm00001eb361420 Zea mays HOM05D032919 ORTHO05D005574 3.7e-07 60.8 45 60.0
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 4.8e-07 60.5 46 58.7

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (4 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (6 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (2 genes)
Zea mays (5 genes)

Program Settings