Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 2.6e-172 608.6 303 100.0
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 3.8e-171 604.7 302 99.3
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 8.4e-163 577.0 302 94.7
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 8.2e-134 480.7 299 80.3
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 1.5e-124 449.9 261 85.4
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 5.2e-96 355.1 305 60.7
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.6e-95 352.8 211 82.5
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.1e-93 347.4 307 61.2
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 2.0e-87 326.6 304 56.6
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 1.3e-86 323.9 304 55.9
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 2.2e-86 323.2 319 54.9
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 4.9e-86 322.0 309 56.3
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 2.4e-85 319.7 307 56.4
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 4.1e-85 318.9 305 57.0
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 4.1e-85 318.9 305 55.7
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 3.0e-83 312.8 304 55.3
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 3.0e-83 312.8 305 54.8
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 1.1e-82 310.8 312 54.8
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.1e-82 310.8 303 53.5
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.9e-82 310.1 317 56.2
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 7.3e-82 308.1 315 52.7
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 9.5e-82 307.8 309 53.1
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.2e-81 307.4 303 56.1
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.2e-81 307.4 309 52.8
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 2.1e-81 306.6 309 53.4
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 6.2e-81 305.1 305 53.4
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 1.1e-80 304.3 297 54.5
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.4e-80 303.9 330 51.8
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 4.0e-80 302.4 189 80.4
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 4.0e-80 302.4 329 51.1
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 4.0e-80 302.4 306 53.6
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 1.2e-79 300.8 307 48.5
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 1.5e-79 300.4 351 48.4
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 1.7e-78 297.0 315 47.6
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 1.7e-78 297.0 312 49.4
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 2.9e-78 296.2 311 51.1
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 3.7e-78 295.8 307 52.8
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 4.9e-78 295.4 311 49.2
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 6.4e-78 295.0 311 52.7
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 6.4e-78 295.0 310 49.0
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 1.1e-77 294.3 314 52.2
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.1e-77 294.3 315 54.3
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 1.4e-77 293.9 312 49.4
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 1.9e-77 293.5 312 51.3
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.9e-77 293.5 310 49.0
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 5.4e-77 292.0 307 53.1
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 7.0e-77 291.6 310 52.6
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 9.2e-77 291.2 314 49.4
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 9.2e-77 291.2 303 53.8
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 9.2e-77 291.2 312 51.0
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 1.2e-76 290.8 306 51.6
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 1.2e-76 290.8 311 52.1
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 2.7e-76 289.7 304 53.6
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 2.7e-76 289.7 255 58.0
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 7.8e-76 288.1 315 51.4
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.3e-75 287.3 329 49.5
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 1.7e-75 287.0 318 48.4
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.1e-74 284.3 314 51.0
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 1.5e-74 283.9 307 52.4
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 1.9e-74 283.5 313 52.4
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 1.9e-74 283.5 304 48.7
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 3.3e-74 282.7 310 52.6
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 3.3e-74 282.7 305 53.4
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 4.3e-74 282.3 318 50.0
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 5.6e-74 282.0 317 50.5
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 1.6e-73 280.4 309 50.2
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 3.6e-73 279.3 308 51.3
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 6.2e-73 278.5 283 53.4
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 8.1e-73 278.1 309 52.4
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 8.9e-72 274.6 313 51.8
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.1e-69 267.7 303 47.2
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 1.1e-66 257.7 294 47.3
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 2.5e-66 256.5 331 45.6
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 4.3e-66 255.8 321 46.7
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 2.0e-63 246.9 308 46.8
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 2.6e-63 246.5 387 41.6
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 5.8e-63 245.4 210 59.5
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 9.2e-61 238.0 294 49.0
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 1.6e-60 237.3 338 43.2
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.7e-60 236.5 305 44.3
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 7.8e-60 235.0 188 60.6
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 1.5e-58 230.7 303 46.2
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 1.9e-58 230.3 434 38.0
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 2.1e-57 226.9 334 42.2
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 2.1e-57 226.9 191 61.8
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.4e-56 224.2 193 56.5
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 5.2e-56 222.2 308 41.6
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 1.5e-55 220.7 205 54.1
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 2.4e-53 213.4 341 39.3
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 7.1e-53 211.8 330 42.4
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 3.5e-52 209.5 307 41.7
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.1e-50 204.5 307 42.0
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 1.9e-50 203.8 283 44.9
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 3.3e-50 203.0 316 41.5
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 7.3e-50 201.8 258 43.8
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.3e-49 201.1 367 35.7
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 5.4e-45 185.7 354 39.0
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 4.6e-44 182.6 202 53.0
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.9e-43 179.5 207 51.2
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 5.1e-43 179.1 283 38.9
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 9.9e-39 164.9 231 45.9
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 2.7e-36 156.8 151 55.6
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 1.3e-33 147.9 464 29.7
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 5.8e-31 139.0 334 35.0
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 8.4e-30 135.2 169 40.2
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 6.7e-27 125.6 83 77.1
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.3e-26 123.2 311 33.8
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 1.5e-23 114.4 93 62.4
SEGI_01830 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 1.6e-20 104.4 117 44.4
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 1.0e-19 101.7 85 60.0
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 1.4e-19 101.3 196 35.2
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.5e-18 97.1 59 78.0
Cc03_g11790 Coffea canephora HOM05D006096 ORTHO05D007775 4.3e-18 96.3 86 58.1
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 2.9e-14 83.6 153 35.9
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 2.5e-13 80.5 54 70.4
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 1.4e-08 64.7 90 41.1
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.9e-07 59.3 88 43.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (3 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (3 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (5 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings