Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 4.6e-135 484.6 247 100.0
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 1.8e-134 482.6 247 99.6
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 9.6e-133 476.9 247 98.4
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 4.5e-130 468.0 247 96.0
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 8.8e-102 374.0 249 81.1
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 6.5e-89 331.3 278 67.6
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.4e-86 323.6 299 63.5
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.2e-71 273.9 228 61.8
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 8.0e-71 271.2 228 59.2
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 1.3e-68 263.8 234 56.8
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 2.9e-68 262.7 233 59.2
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 3.7e-68 262.3 223 58.3
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 3.2e-67 259.2 225 58.7
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 3.5e-66 255.8 220 61.4
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.5e-66 255.8 220 60.0
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 4.6e-66 255.4 225 56.9
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 8.6e-65 251.1 226 56.2
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 8.6e-65 251.1 224 55.8
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.1e-64 250.8 223 56.5
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.1e-64 250.8 222 56.3
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 1.9e-64 250.0 223 55.6
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 3.3e-64 249.2 221 56.6
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 7.3e-64 248.1 222 56.3
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 7.3e-64 248.1 223 57.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 9.5e-64 247.7 221 58.8
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 2.1e-63 246.5 223 57.4
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 4.7e-63 245.4 223 55.6
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.8e-62 243.4 225 57.8
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 3.1e-62 242.7 222 54.5
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 3.4e-61 239.2 223 55.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.3e-60 237.3 223 56.1
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.7e-60 236.9 238 55.5
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 2.2e-60 236.5 223 56.1
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.1e-59 234.2 223 56.5
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.9e-59 233.4 223 57.4
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 2.4e-59 233.0 196 60.7
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 7.1e-59 231.5 225 55.6
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 9.2e-59 231.1 222 55.0
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 9.2e-59 231.1 223 56.5
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.2e-58 230.7 225 56.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.2e-58 230.7 225 54.7
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 1.6e-58 230.3 222 56.3
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 4.6e-58 228.8 223 56.1
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 1.3e-57 227.3 224 54.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.3e-57 227.3 222 50.9
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.1e-57 225.3 229 55.0
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.5e-56 223.8 238 49.6
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.5e-56 223.8 223 55.2
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 3.6e-55 219.2 224 54.5
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 6.2e-55 218.4 224 54.5
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 8.1e-55 218.0 205 56.6
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.1e-55 218.0 235 53.2
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 3.1e-54 216.1 225 52.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 4.0e-54 215.7 217 55.8
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 8.9e-54 214.5 221 51.6
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 3.4e-53 212.6 221 52.5
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 3.4e-53 212.6 236 49.2
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.8e-53 211.8 221 51.6
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 5.8e-53 211.8 221 50.2
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 7.6e-53 211.5 221 52.0
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 2.2e-52 209.9 221 51.1
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 2.2e-52 209.9 235 48.5
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.9e-52 209.5 223 52.9
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 3.7e-52 209.1 228 50.9
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.7e-52 209.1 219 52.1
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.9e-52 208.8 219 51.6
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 8.4e-52 208.0 236 48.3
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-51 207.6 225 47.6
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.9e-51 206.8 221 50.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.4e-51 206.5 225 50.7
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 9.2e-51 204.5 225 49.8
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.6e-50 203.8 221 51.1
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.6e-50 203.8 253 48.2
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.1e-50 203.4 252 48.4
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.7e-50 203.0 220 47.3
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 4.6e-50 202.2 221 50.7
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.3e-49 200.7 218 50.0
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 1.7e-49 200.3 218 49.5
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 3.0e-49 199.5 223 50.2
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.5e-48 197.2 236 50.0
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.5e-48 197.2 172 55.8
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 5.2e-46 188.7 237 46.8
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 3.4e-45 186.0 217 47.0
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 4.4e-45 185.7 223 45.7
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 5.8e-45 185.3 205 51.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 7.6e-45 184.9 207 49.8
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.2e-44 183.3 231 47.2
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.4e-43 179.9 192 53.1
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.6e-42 177.2 222 49.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.7e-41 173.7 230 41.3
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.9e-41 172.6 220 43.6
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.3e-40 169.1 221 49.8
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.6e-39 167.2 152 55.9
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 8.1e-39 164.9 179 51.4
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 4.4e-37 159.1 199 48.2
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.8e-37 158.7 223 42.6
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.2e-35 152.5 99 73.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 5.4e-35 152.1 307 36.5
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 9.3e-35 151.4 195 48.7
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.6e-34 150.6 202 46.0
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 1.3e-33 147.5 163 51.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.9e-32 143.7 189 40.7
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 9.6e-32 141.4 211 40.8
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 5.3e-30 135.6 284 36.3
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.2e-29 134.4 179 44.1
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 9.9e-29 131.3 227 37.9
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 5.5e-27 125.6 277 36.1
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 2.7e-26 123.2 253 36.8
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 2.7e-26 123.2 234 35.5
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.0e-25 121.3 73 74.0
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.3e-25 120.2 152 41.4
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 6.7e-25 118.6 75 69.3
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 6.7e-25 118.6 132 52.3
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.5e-24 116.7 132 53.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 5.6e-24 115.5 196 36.2
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 6.9e-22 108.6 203 37.4
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 1.5e-21 107.5 137 45.3
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 3.8e-20 102.8 118 48.3
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.7e-18 96.7 194 34.0
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.7e-15 86.3 72 65.3
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 6.3e-15 85.5 72 65.3
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 1.1e-14 84.7 194 33.5
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 7.2e-11 72.0 106 44.3
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.6e-10 70.9 165 30.9
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 4.8e-07 59.3 58 60.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (3 genes)
Zea mays (1 genes)

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