Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 7.4e-175 617.1 308 100.0
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 4.1e-173 611.3 308 99.0
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 1.3e-166 589.7 308 95.8
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.8e-158 562.0 308 89.6
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 9.1e-157 557.0 308 89.0
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 4.0e-152 541.6 308 87.3
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.7e-150 535.0 308 87.0
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.1e-136 490.3 309 77.0
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.1e-136 490.3 309 77.0
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 2.3e-136 489.2 309 76.4
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 7.5e-135 484.2 306 76.5
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 3.7e-134 481.9 310 74.5
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 6.4e-134 481.1 308 76.6
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 9.2e-133 477.2 306 74.8
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 1.0e-131 473.8 304 75.0
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 1.3e-131 473.4 306 74.8
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 2.3e-131 472.6 308 76.0
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 3.0e-131 472.2 306 72.2
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 3.9e-131 471.9 302 75.2
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 8.6e-131 470.7 306 75.5
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.1e-130 470.3 306 73.5
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 1.9e-130 469.5 307 74.3
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.5e-130 469.2 305 73.4
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 2.5e-130 469.2 306 71.6
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 2.5e-130 469.2 306 74.8
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 7.3e-130 467.6 306 73.5
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 7.3e-130 467.6 303 74.3
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 9.5e-130 467.2 306 73.2
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 8.1e-129 464.2 306 73.9
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 8.1e-129 464.2 310 73.9
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 1.4e-128 463.4 307 73.9
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 1.4e-128 463.4 306 73.5
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 5.2e-128 461.5 307 73.6
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 8.9e-128 460.7 305 72.1
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 1.5e-127 459.9 306 73.9
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 3.4e-127 458.8 306 72.5
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 4.4e-127 458.4 306 71.6
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 5.8e-127 458.0 310 72.9
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 5.8e-127 458.0 307 73.0
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 9.9e-127 457.2 307 74.6
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.3e-126 456.8 306 71.9
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.7e-126 456.4 307 72.6
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 2.9e-126 455.7 307 72.0
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 3.7e-126 455.3 319 69.9
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 4.9e-126 454.9 309 73.5
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 4.9e-126 454.9 305 72.1
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 6.4e-126 454.5 303 71.3
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.4e-125 453.4 307 71.0
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 1.4e-125 453.4 308 73.4
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.9e-125 453.0 307 73.0
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 2.4e-125 452.6 307 72.0
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 3.2e-125 452.2 306 71.2
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 4.1e-125 451.8 309 74.1
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 5.4e-125 451.4 305 71.8
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 7.1e-125 451.1 305 71.1
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.2e-124 450.3 306 71.2
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 1.6e-124 449.9 305 71.8
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 1.6e-124 449.9 306 71.2
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.1e-124 449.5 350 64.9
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 7.8e-124 447.6 317 72.2
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 3.0e-123 445.7 305 71.1
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.6e-123 444.5 307 69.4
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 8.6e-123 444.1 307 69.4
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.9e-122 443.0 307 69.1
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 1.9e-122 443.0 307 69.1
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 3.3e-122 442.2 305 68.9
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 5.6e-122 441.4 325 69.8
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 1.2e-121 440.3 309 68.6
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.2e-121 440.3 307 69.4
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.2e-121 440.3 307 69.4
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 2.1e-121 439.5 309 68.3
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 4.7e-121 438.3 304 68.4
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 8.1e-121 437.6 309 68.0
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.1e-120 437.2 304 68.1
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 1.8e-120 436.4 304 68.4
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 2.4e-120 436.0 307 68.4
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 2.4e-120 436.0 305 69.5
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 6.8e-120 434.5 304 67.1
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 1.2e-119 433.7 305 67.9
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 2.0e-119 433.0 304 67.8
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 2.0e-119 433.0 304 67.8
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 7.6e-119 431.0 307 69.1
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.3e-118 430.3 328 61.6
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 1.3e-118 430.3 305 65.9
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 2.2e-118 429.5 323 66.3
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 2.2e-118 429.5 340 65.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 3.8e-118 428.7 305 65.9
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.8e-118 428.7 309 69.3
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 6.4e-118 427.9 306 68.6
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 1.9e-117 426.4 381 59.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.6e-116 423.3 275 74.5
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 6.6e-115 417.9 271 72.0
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 4.3e-114 415.2 302 65.6
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.2e-110 402.9 304 66.4
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 6.4e-110 401.4 302 64.6
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.4e-110 401.0 285 69.8
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 1.4e-109 400.2 311 64.6
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 2.7e-108 396.0 287 67.9
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.3e-107 393.7 240 79.2
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.6e-105 386.7 306 64.4
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 3.6e-105 385.6 245 77.6
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 3.4e-103 379.0 245 75.9
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 4.3e-98 362.1 305 60.3
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 1.3e-97 360.5 306 61.1
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 7.6e-95 351.3 241 68.0
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 2.0e-87 326.6 209 75.6
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 7.6e-87 324.7 304 55.6
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 1.4e-85 320.5 302 53.3
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 6.7e-83 311.6 211 70.1
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 1.5e-82 310.5 301 53.8
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.2e-79 300.8 304 53.3
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.0e-70 271.2 291 47.4
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.4e-58 229.2 148 74.3
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 1.8e-56 223.8 319 42.6
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.2e-55 221.1 180 56.1
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.6e-55 220.7 146 74.0
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 1.5e-53 214.2 290 39.3
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 2.4e-48 196.8 156 60.3
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.1e-40 171.4 184 53.3
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.2e-39 167.9 149 58.4
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 2.5e-37 160.2 149 57.0
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 3.9e-30 136.3 95 68.4
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 9.5e-29 131.7 96 66.7
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 6.8e-27 125.6 100 63.0
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.2e-20 102.4 67 76.1
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 8.0e-20 102.1 69 69.6
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.1e-19 101.7 64 73.4
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.0e-18 97.4 70 58.6
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 9.8e-18 95.1 59 74.6
DCAR_021657 Daucus carota HOM05D000572 ORTHO05D002399 1.0e-06 58.5 76 50.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (4 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings