Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g009410.3 Solanum lycopersicum HOM05D004768 ORTHO05D005812 3.9e-172 608.2 349 100.0
Sopen09g004150 Solanum pennellii HOM05D004768 ORTHO05D005812 6.3e-162 574.3 375 91.2
Nitab4.5_0003550g0050 Nicotiana tabacum HOM05D004768 ORTHO05D005812 1.1e-54 218.0 344 54.1
Solyc09g074400.3 Solanum lycopersicum HOM05D004768 ORTHO05D005812 7.4e-54 215.3 360 51.4
Sopen09g029240 Solanum pennellii HOM05D004768 ORTHO05D005812 1.6e-53 214.2 360 51.1
CDE02G3328 Ceratophyllum demersum HOM05D004768 ORTHO05D005812 1.9e-49 200.7 364 34.3
Peaxi162Scf00290g00062 Petunia axillaris HOM05D004768 ORTHO05D005812 1.9e-49 200.7 362 48.6
SGA_v2.0_scaffold184G39961 Striga asiatica HOM05D004768 ORTHO05D005812 1.6e-48 197.6 358 48.0
CANSAT78G2462 Cannabis sativa HOM05D004768 ORTHO05D005812 2.1e-48 197.2 366 48.6
Atru.chr8.1546 Acer truncatum HOM05D004768 ORTHO05D005812 6.1e-48 195.7 362 48.9
SalBow7G2666 Salvia bowleyana HOM05D004768 ORTHO05D005812 1.3e-47 194.5 362 48.1
Oeu047201.1 Olea europaea HOM05D004768 ORTHO05D005812 2.3e-47 193.7 358 48.3
Ciclev10012077m.g Citrus clementina HOM05D004768 ORTHO05D005812 5.1e-47 192.6 355 47.9
MSTRG.10364 Avicennia marina HOM05D004768 ORTHO05D005812 9.7e-46 188.3 360 47.5
Cpa.g.sc5.22 Carica papaya HOM05D004768 ORTHO05D005812 1.3e-45 188.0 358 48.3
CSS0047457 Camellia sinensis var. sinensis HOM05D004768 ORTHO05D005812 2.8e-45 186.8 360 48.6
CDE08G0455 Ceratophyllum demersum HOM05D004768 ORTHO05D005812 2.8e-45 186.8 344 38.1
Ca_09003_v3 Cicer arietinum L. HOM05D004768 ORTHO05D005812 4.1e-44 183.0 356 47.2
Glyma.03G195400 Glycine max HOM05D004768 ORTHO05D005812 1.2e-43 181.4 351 47.0
TWI74G0982 Tripterygium wilfordii HOM05D004768 ORTHO05D005812 1.5e-43 181.0 360 48.6
MSTRG.26639 Avicennia marina HOM05D004768 ORTHO05D005812 2.6e-43 180.3 361 46.3
Medtr7g104550 Medicago truncatula HOM05D004768 ORTHO05D005812 2.6e-43 180.3 353 47.3
Sabra16G0131600 Salix brachista HOM05D004768 ORTHO05D000138 2.6e-43 180.3 380 46.1
TPR.G19532 Trifolium pratense HOM05D004768 ORTHO05D005812 4.5e-43 179.5 326 49.7
Phvul.001G190000 Phaseolus vulgaris HOM05D004768 ORTHO05D005812 1.0e-42 178.3 353 46.5
FAN05G5395 Fragaria x ananassa HOM05D004768 ORTHO05D005812 1.3e-42 177.9 358 44.4
Aqoxy2G01203 Aquilegia oxysepala HOM05D004768 ORTHO05D005812 2.9e-42 176.8 360 46.7
Eucgr.K02044 Eucalyptus grandis HOM05D004768 ORTHO05D005812 3.8e-42 176.4 354 46.6
VMungo1383G3473 Vigna mungo HOM05D004768 ORTHO05D005812 3.8e-42 176.4 353 46.2
COL.COLO4_29739 Corchorus olitorius HOM05D004768 ORTHO05D005812 5.0e-42 176.0 358 45.5
Psat3g033480 Pisum sativum HOM05D004768 ORTHO05D005812 5.0e-42 176.0 353 47.0
CiPaw.10G009400 Carya illinoinensis HOM05D004768 ORTHO05D005812 6.5e-42 175.6 356 47.2
Sed0006419 Sechium edule HOM05D004768 ORTHO05D005812 6.5e-42 175.6 353 46.2
FAN05G3800 Fragaria x ananassa HOM05D004768 ORTHO05D005812 8.5e-42 175.3 358 44.1
FAN09G1393 Fragaria x ananassa HOM05D004768 ORTHO05D005812 1.1e-41 174.9 358 43.9
Sed0028141 Sechium edule HOM05D004768 ORTHO05D005812 1.1e-41 174.9 354 46.3
MELO3C009471.2 Cucumis melo HOM05D004768 ORTHO05D005812 1.4e-41 174.5 326 49.4
Migut.L01777 Erythranthe guttata HOM05D004768 ORTHO05D005812 1.4e-41 174.5 358 45.3
Lsat_1_v5_gn_8_77061 Lactuca sativa HOM05D004768 ORTHO05D005812 2.5e-41 173.7 355 47.0
Manes.09G055600 Manihot esculenta HOM05D004768 ORTHO05D005812 2.5e-41 173.7 360 46.9
arahy.Tifrunner.gnm1.ann1.UHNL6N Arachis hypogaea HOM05D004768 ORTHO05D005812 3.2e-41 173.3 358 46.4
Gohir.D01G195900 Gossypium hirsutum HOM05D004768 ORTHO05D005812 3.2e-41 173.3 353 46.5
Gohir.A01G206500 Gossypium hirsutum HOM05D004768 ORTHO05D005812 4.2e-41 172.9 357 45.9
MD12G1035900 Malus domestica HOM05D004768 ORTHO05D005812 4.2e-41 172.9 357 46.8
TWI77G0792 Tripterygium wilfordii HOM05D004768 ORTHO05D005812 4.2e-41 172.9 360 48.1
arahy.Tifrunner.gnm1.ann1.F6QZS0 Arachis hypogaea HOM05D004768 ORTHO05D005812 5.5e-41 172.6 358 46.6
Gorai.002G240100 Gossypium raimondii HOM05D004768 ORTHO05D005812 5.5e-41 172.6 353 46.2
Lj2A136G54 Lonicera japonica HOM05D004768 ORTHO05D005812 5.5e-41 172.6 361 45.4
Lalb_Chr20g0111731 Lupinus albus HOM05D004768 ORTHO05D005812 5.5e-41 172.6 355 45.6
Duzib128G0567 Durio zibethinus HOM05D004768 ORTHO05D005812 1.2e-40 171.4 329 49.2
PSO229G0127 Papaver somniferum HOM05D004768 ORTHO05D005812 1.2e-40 171.4 356 46.1
Hma1.2p1_0084F.1_g043770 Hydrangea macrophylla HOM05D004768 ORTHO05D005812 2.7e-40 170.2 358 45.0
Nitab4.5_0001107g0160 Nicotiana tabacum HOM05D004768 ORTHO05D005812 2.7e-40 170.2 336 50.0
CsaV3_3G037260 Cucumis sativus L. HOM05D004768 ORTHO05D005812 3.6e-40 169.9 354 46.6
CiPaw.09G013600 Carya illinoinensis HOM05D004768 ORTHO05D005812 4.7e-40 169.5 343 46.6
PSO384G2514 Papaver somniferum HOM05D004768 ORTHO05D005812 7.9e-40 168.7 354 46.0
Prupe.7G110600 Prunus persica HOM05D004768 ORTHO05D005812 7.9e-40 168.7 355 46.5
Lj1g0007409 Lotus japonicus HOM05D004768 ORTHO05D005812 1.0e-39 168.3 351 45.3
QL07p038809 Quercus lobata HOM05D004768 ORTHO05D005812 2.3e-39 167.2 362 45.9
QL07p039071 Quercus lobata HOM05D004768 ORTHO05D005812 2.3e-39 167.2 362 45.9
ClCG10G018990 Citrullus lanatus HOM05D004768 ORTHO05D005812 3.0e-39 166.8 355 46.5
Thecc.05G088700 Theobroma cacao HOM05D004768 ORTHO05D005812 3.0e-39 166.8 357 44.8
HPP92_013808 Vanilla planifolia HOM05D004768 ORTHO05D005812 3.0e-39 166.8 354 45.8
PGR142G0725 Punica granatum HOM05D004768 ORTHO05D005812 5.1e-39 166.0 354 44.4
PSO339G5247 Papaver somniferum HOM05D004768 ORTHO05D005812 6.7e-39 165.6 354 45.8
MD14G1022600 Malus domestica HOM05D004768 ORTHO05D005812 1.1e-38 164.9 357 45.7
ATR0776G063 Amborella trichopoda HOM05D004768 ORTHO05D005812 2.6e-38 163.7 354 44.4
RcHm_v2.0_Chr3g0473611 Rosa chinensis HOM05D004768 ORTHO05D005812 4.4e-38 162.9 351 43.6
SEGI_40271 Sequoiadendron giganteum HOM05D004768 ORTHO05D005812 9.7e-38 161.8 368 42.9
Actinidia05433 Actinidia chinensis HOM05D004768 ORTHO05D005812 1.7e-37 161.0 365 44.4
FvH4_6g18650 Fragaria vesca HOM05D004768 ORTHO05D005812 1.7e-37 161.0 351 43.0
Rhsim03G0075500 Rhododendron simsii HOM05D004768 ORTHO05D005812 3.7e-37 159.8 388 43.0
Cc06_g05720 Coffea canephora HOM05D004768 ORTHO05D005812 6.3e-37 159.1 362 45.3
THA.LOC104816391 Tarenaya hassleriana HOM05D004768 ORTHO05D005812 8.2e-37 158.7 355 44.5
TAR633G0463 Trochodendron aralioides HOM05D004768 ORTHO05D005812 8.2e-37 158.7 361 45.4
HanXRQChr01g0001951 Helianthus annuus HOM05D004768 ORTHO05D005812 1.4e-36 157.9 352 43.2
Sc02g0000880 Simmondsia chinensis HOM05D004768 ORTHO05D005812 2.4e-36 157.1 360 44.4
FAN14G4330 Fragaria x ananassa HOM05D004768 ORTHO05D005812 5.3e-36 156.0 358 42.7
Potri.002G212800 Populus trichocarpa HOM05D004768 ORTHO05D005812 5.3e-36 156.0 365 45.8
ECA248G2777 Erigeron canadensis HOM05D004140 ORTHO05D000452 6.9e-36 155.6 340 42.9
Potri.001G221000 Populus trichocarpa HOM05D004768 ORTHO05D005812 6.9e-36 155.6 363 44.9
unitig_746.g26778 Utricularia gibba HOM05D004768 ORTHO05D005812 2.0e-35 154.1 358 44.4
Lsat_1_v5_gn_5_164801 Lactuca sativa HOM05D004768 ORTHO05D005812 4.5e-35 152.9 355 42.3
HanXRQChr05g0133111 Helianthus annuus HOM05D004768 ORTHO05D005812 5.9e-35 152.5 361 43.5
FAN02G2744 Fragaria x ananassa HOM05D004768 ORTHO05D005812 2.2e-34 150.6 351 42.5
Sp4g05920 Schrenkiella parvula HOM05D004768 ORTHO05D005812 2.2e-34 150.6 355 43.4
Aa31sc210G50 Aethionema arabicum HOM05D004768 ORTHO05D005812 2.5e-33 147.1 362 33.7
AL4G18210 Arabidopsis lyrata HOM05D004768 ORTHO05D005812 2.5e-33 147.1 355 43.4
AT2G26060 Arabidopsis thaliana HOM05D004768 ORTHO05D005812 7.2e-33 145.6 355 43.4
Manes.08G025000 Manihot esculenta HOM05D004768 ORTHO05D005812 6.1e-32 142.5 336 45.2
Carub.0004s0588 Capsella rubella HOM05D004768 ORTHO05D005812 1.0e-31 141.7 355 42.8
A08p05150 Brassica napus HOM05D004768 ORTHO05D005812 2.3e-31 140.6 336 45.8
BolC8t47355H Brassica oleracea HOM05D004768 ORTHO05D005812 2.3e-31 140.6 358 31.3
Thhalv10002028m.g Eutrema salsugineum HOM05D004768 ORTHO05D005812 3.0e-31 140.2 359 42.3
BcaB08g35238 Brassica carinata HOM05D004768 ORTHO05D005812 3.9e-31 139.8 354 43.2
EL10Ac4g08441 Beta vulgaris HOM05D004768 ORTHO05D005812 5.2e-31 139.4 350 42.3
AagrBONN_evm.TU.Sc2ySwM_344.1733 Anthoceros agrestis HOM05D004768 ORTHO05D005812 3.3e-30 136.7 358 41.3
DCAR_020747 Daucus carota HOM05D004768 ORTHO05D005812 1.7e-29 134.4 352 37.5
AUR62017616 Chenopodium quinoa HOM05D004768 ORTHO05D005812 3.7e-29 133.3 351 42.7
EL10Ac4g08444 Beta vulgaris HOM05D004768 ORTHO05D005812 4.8e-29 132.9 299 29.8
Os07g0252000 Oryza sativa ssp. japonica HOM05D004768 ORTHO05D005812 1.1e-28 131.7 345 43.2
Carub.0007s0749 Capsella rubella HOM05D004768 ORTHO05D005812 1.8e-28 131.0 349 41.3
GSVIVG01033839001 Vitis vinifera HOM05D004768 ORTHO05D005812 1.8e-28 131.0 362 42.0
PGSC0003DMG400016841 Solanum tuberosum HOM05D004768 ORTHO05D005812 5.9e-27 125.9 274 49.3
AL7G18690 Arabidopsis lyrata HOM05D004768 ORTHO05D005812 3.2e-25 120.2 353 39.1
Pp3c21_14500 Physcomitrium patens HOM05D004768 ORTHO05D005812 7.2e-25 119.0 346 40.5
Sabra16G0123600 Salix brachista HOM05D000102 ORTHO05D005812 2.1e-24 117.5 388 39.7
C08p38320 Brassica napus HOM05D004768 ORTHO05D005812 8.0e-24 115.5 178 41.0
BolC8t51408H Brassica oleracea HOM05D004768 ORTHO05D005812 4.0e-23 113.2 178 40.4
A09p55390 Brassica napus HOM05D004768 ORTHO05D005812 6.7e-23 112.5 178 39.3
BraA09t40941Z Brassica rapa HOM05D004768 ORTHO05D005812 6.7e-23 112.5 178 39.3
vmacro07406 Vaccinium macrocarpon HOM05D004768 ORTHO05D005812 8.8e-23 112.1 497 33.4
SMO239G0020 Selaginella moellendorffii HOM05D004768 ORTHO05D005812 2.0e-22 110.9 357 36.1
CARHR241000 Cardamine hirsuta HOM05D004768 ORTHO05D005812 2.6e-22 110.5 289 36.0
Haze_19607 Corylus avellana HOM05D004768 ORTHO05D005812 1.3e-21 108.2 351 40.7
Dinv31684 Davidia involucrata HOM05D004768 ORTHO05D005812 1.7e-21 107.8 277 45.5
DCAR_009162 Daucus carota HOM05D004768 ORTHO05D005812 6.3e-21 105.9 130 40.8
Mapoly0001s0287 Marchantia polymorpha HOM05D004768 ORTHO05D005812 6.3e-21 105.9 172 36.0
Dinv21211 Davidia involucrata HOM05D004768 ORTHO05D005812 1.4e-20 104.8 115 50.4
TAR636G3610 Trochodendron aralioides HOM05D004768 ORTHO05D005812 1.8e-20 104.4 107 54.2
Aqoxy3G02763 Aquilegia oxysepala HOM05D004768 ORTHO05D005812 1.0e-18 98.6 167 40.1
Oeu056927.1 Olea europaea HOM05D004768 ORTHO05D005812 1.7e-18 97.8 115 50.4
TWI53G2067 Tripterygium wilfordii HOM05D004768 ORTHO05D005812 2.9e-18 97.1 112 54.5
Zm00001eb304430 Zea mays HOM05D004768 ORTHO05D005812 3.8e-18 96.7 130 42.3
DCAR_009163 Daucus carota HOM05D004768 ORTHO05D005812 5.0e-18 96.3 117 48.7
BcaC07g40836 Brassica carinata HOM05D004768 ORTHO05D005812 2.5e-17 94.0 106 48.1
Hund03983 Selenicereus undatus HOM05D004768 ORTHO05D005812 4.7e-16 89.7 113 48.7
Aa31LG5G9700 Aethionema arabicum HOM05D004768 ORTHO05D005812 1.8e-15 87.8 114 46.5
Ah.01g002000 Amaranthus hybridus HOM05D000289 ORTHO05D000208 1.8e-15 87.8 108 45.4
Potri.001G221150 Populus trichocarpa HOM05D004768 ORTHO05D005812 1.5e-14 84.7 95 44.2
BraA08t32532Z Brassica rapa HOM05D004768 ORTHO05D005812 3.4e-14 83.6 109 45.9
AagrBONN_evm.TU.Sc2ySwM_344.3396 Anthoceros agrestis HOM05D004768 ORTHO05D005812 7.5e-14 82.4 158 31.6
CARHR262780 Cardamine hirsuta HOM05D004768 ORTHO05D005812 9.8e-14 82.0 102 40.2
SalBow1G7826 Salvia bowleyana HOM05D004768 ORTHO05D005812 2.8e-13 80.5 331 27.5
C08p05390 Brassica napus HOM05D004768 ORTHO05D005812 9.1e-12 75.5 68 51.5
CARHR114770 Cardamine hirsuta HOM05D004768 ORTHO05D005812 1.2e-11 75.1 68 52.9
Aa31LG7G14190 Aethionema arabicum HOM05D004768 ORTHO05D005812 6.5e-10 69.3 129 38.0
Nn2g14155 Nelumbo nucifera HOM05D004768 ORTHO05D005812 6.5e-10 69.3 48 64.6
SalBow1G3573 Salvia bowleyana HOM05D004768 ORTHO05D005812 1.0e-07 62.0 65 44.6
DCAR_020750 Daucus carota HOM05D004768 ORTHO05D005812 5.2e-07 59.7 323 21.1
Oeu009219.1 Olea europaea HOM05D004768 ORTHO05D005812 5.2e-07 59.7 158 58.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (3 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (3 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (4 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings