Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.7e-88 328.2 164 100.0
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 2.8e-51 205.7 102 96.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.1e-51 204.5 102 96.1
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.2e-49 200.3 102 93.1
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.5e-49 199.9 102 93.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.5e-49 199.9 102 93.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.0e-49 199.5 102 92.2
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.6e-49 199.1 102 92.2
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.6e-49 199.1 102 92.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.4e-49 198.7 101 94.1
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.4e-49 198.7 102 93.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.4e-49 198.7 102 93.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.4e-49 198.7 102 93.1
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 4.4e-49 198.4 101 93.1
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 7.5e-49 197.6 124 79.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.3e-48 196.8 101 92.1
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 2.2e-48 196.1 101 92.1
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.2e-48 196.1 101 92.1
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 2.2e-48 196.1 104 90.4
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.9e-48 194.9 102 91.2
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 4.9e-48 194.9 104 90.4
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 4.9e-48 194.9 102 91.2
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 4.9e-48 194.9 102 91.2
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 4.9e-48 194.9 102 90.2
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 8.3e-48 194.1 102 90.2
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 8.3e-48 194.1 102 91.2
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 8.3e-48 194.1 102 91.2
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.1e-47 193.7 102 91.2
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.4e-47 193.4 102 90.2
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.4e-47 193.4 102 90.2
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.4e-47 193.4 102 90.2
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.4e-47 192.6 102 89.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.4e-47 192.6 102 89.2
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 2.4e-47 192.6 101 90.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 2.4e-47 192.6 101 90.1
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 2.7e-46 189.1 102 89.2
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.5e-46 188.7 101 90.1
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.5e-46 188.7 101 90.1
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-46 188.7 101 88.1
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 7.8e-46 187.6 102 88.2
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 7.8e-46 187.6 102 88.2
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 7.8e-46 187.6 102 88.2
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.0e-45 187.2 101 89.1
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.0e-45 187.2 101 89.1
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-45 187.2 101 87.1
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 3.8e-45 185.3 102 87.3
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-45 184.5 107 83.2
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-44 183.7 101 86.1
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-44 183.3 101 85.1
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-44 183.0 97 88.7
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.3e-44 182.2 102 86.3
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.3e-44 182.2 101 88.1
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.3e-44 181.8 101 87.1
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-44 181.0 100 86.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 9.5e-44 180.6 103 84.5
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-43 179.9 101 84.2
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-43 179.9 100 86.0
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 3.6e-43 178.7 93 91.4
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 6.1e-43 177.9 97 86.6
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 2.3e-42 176.0 102 83.3
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.2e-41 173.7 101 84.2
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-41 173.3 101 82.2
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-41 172.6 101 81.2
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 7.5e-41 171.0 102 81.4
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 9.8e-41 170.6 102 81.4
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-40 168.7 107 75.7
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-39 165.6 116 73.3
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 4.1e-39 165.2 94 85.1
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.0e-38 161.4 91 85.7
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-36 155.2 101 78.2
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 2.1e-35 152.9 102 75.5
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 4.7e-35 151.8 101 73.3
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 1.8e-34 149.8 80 88.8
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-34 149.4 85 82.4
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.3e-32 143.7 100 71.0
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 4.9e-32 141.7 84 83.3
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.4e-31 139.4 73 90.4
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 2.4e-31 139.4 73 90.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 5.4e-31 138.3 99 71.7
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-30 136.7 75 85.3
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-29 132.5 69 91.3
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-28 130.6 69 88.4
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-28 129.4 69 89.9
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-28 129.4 69 88.4
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-28 129.4 69 89.9
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-28 128.3 69 87.0
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 3.6e-27 125.6 102 67.6
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-26 124.0 79 75.9
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.4e-26 123.6 108 62.0
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.1e-26 122.5 66 86.4
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-26 122.1 101 60.4
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 2.0e-25 119.8 64 87.5
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.3e-24 117.1 69 81.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-24 115.5 68 79.4
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 2.1e-22 109.8 86 65.1
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.9e-21 105.5 56 89.3
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-21 105.5 61 83.6
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.5e-20 102.8 102 56.9
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-20 102.4 69 76.8
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-20 102.1 59 84.7
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.8e-19 99.4 61 82.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.4e-18 97.1 56 82.1
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 1.8e-18 96.7 47 91.5
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-18 96.7 101 55.4
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 2.0e-17 93.2 81 48.1
Peaxi162Scf00183g00815 Petunia axillaris HOM05D009956 ORTHO05D012211 2.0e-17 93.2 62 80.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-17 92.0 56 75.0
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-17 91.3 61 75.4
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-17 91.3 61 75.4
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 2.9e-16 89.4 89 44.9
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-13 80.5 46 84.8
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 2.5e-12 76.3 36 97.2
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 6.2e-11 71.6 37 91.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 2.4e-10 69.7 36 88.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 5.2e-10 68.6 88 45.5
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 9.0e-10 67.8 32 96.9
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.6e-09 66.2 31 96.8
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.6e-09 66.2 40 80.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 7.6e-09 64.7 30 96.7
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 7.6e-09 64.7 31 93.5
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 9.9e-09 64.3 29 96.6
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-09 64.3 30 96.7
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.3e-08 63.9 63 55.6
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.7e-08 63.5 31 93.5
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-08 62.4 55 58.2
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.4e-07 60.5 37 78.4
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 4.2e-07 58.9 63 54.0
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 7.1e-07 58.2 28 92.9
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-06 56.2 81 43.2

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (4 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (3 genes)
Brassica rapa (4 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (2 genes)
Daucus carota (3 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (4 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (5 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (4 genes)
Magnolia biondii (1 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (38 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (5 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings