Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 0.0e+00 1210.7 616 100.0
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 0.0e+00 1204.1 616 99.4
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 0.0e+00 1157.1 615 95.0
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 0.0e+00 1106.7 614 92.3
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 0.0e+00 1104.7 599 93.8
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 0.0e+00 1099.3 615 91.7
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 0.0e+00 1089.7 601 92.5
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 0.0e+00 1085.1 615 90.1
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 6.2e-290 1000.3 614 81.1
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.0e-287 993.0 616 80.8
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 9.3e-286 986.5 615 80.8
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 8.2e-282 973.4 640 76.7
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 5.3e-281 970.7 615 80.3
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 3.4e-280 968.0 615 78.7
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 4.5e-280 967.6 615 79.3
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 2.9e-279 964.9 615 78.5
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 5.0e-279 964.1 615 78.5
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 6.5e-279 963.8 615 78.2
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 1.1e-278 963.0 615 77.7
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 1.4e-278 962.6 615 79.0
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 2.1e-277 958.7 616 78.4
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 3.6e-277 958.0 615 78.9
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 4.6e-277 957.6 616 77.4
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 6.1e-277 957.2 615 78.0
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 6.1e-277 957.2 615 78.0
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 3.9e-276 954.5 615 78.2
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 3.9e-276 954.5 615 77.2
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 8.8e-276 953.4 615 77.7
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 1.5e-275 952.6 615 77.1
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 3.3e-275 951.4 614 77.2
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 7.4e-275 950.3 619 77.9
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 1.3e-274 949.5 615 77.9
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.7e-274 949.1 654 74.3
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 2.2e-274 948.7 615 76.9
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 6.3e-274 947.2 615 76.6
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 8.2e-274 946.8 616 76.9
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 3.1e-273 944.9 614 77.2
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 4.1e-273 944.5 616 77.1
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 1.5e-272 942.6 614 77.4
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 3.4e-272 941.4 624 75.8
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 3.4e-272 941.4 614 76.5
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 1.0e-271 939.9 615 76.6
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.7e-271 939.1 616 76.9
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.2e-269 932.9 615 75.8
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 2.7e-269 931.8 614 76.1
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 4.7e-269 931.0 608 75.7
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 7.9e-269 930.2 625 75.0
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 3.3e-267 924.9 615 75.9
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 2.4e-265 918.7 615 75.0
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 4.1e-265 917.9 615 74.8
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 1.2e-264 916.4 610 74.6
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 2.0e-264 915.6 615 74.6
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 2.0e-264 915.6 610 74.4
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 2.6e-264 915.2 615 75.1
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 7.7e-264 913.7 614 74.8
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 7.7e-264 913.7 615 75.0
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 7.7e-264 913.7 750 65.2
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 1.3e-263 912.9 610 74.6
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.7e-263 912.5 615 75.6
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 8.5e-263 910.2 574 79.3
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 1.1e-262 909.8 615 74.6
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 1.9e-262 909.1 615 74.5
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.9e-262 909.1 615 74.5
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 4.2e-262 907.9 615 74.6
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 5.5e-262 907.5 642 71.3
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 1.2e-261 906.4 616 74.5
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 2.1e-261 905.6 615 74.3
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 3.6e-261 904.8 615 74.5
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 6.1e-261 904.0 615 74.3
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 1.8e-260 902.5 681 69.0
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 9.7e-259 896.7 648 71.0
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 8.2e-258 893.6 615 73.0
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.4e-257 892.9 628 71.8
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 1.6e-256 889.4 541 81.3
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 2.0e-256 889.0 615 73.0
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 5.9e-256 887.5 614 72.8
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 2.9e-255 885.2 620 72.1
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 6.5e-255 884.0 613 73.1
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 3.2e-254 881.7 620 71.6
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 1.8e-252 875.9 615 72.7
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.6e-248 862.8 631 70.2
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 8.5e-247 857.1 615 70.6
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 9.4e-246 853.6 637 68.9
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 1.2e-245 853.2 582 73.9
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.8e-244 849.4 615 68.9
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 1.6e-240 836.3 516 79.7
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 1.6e-240 836.3 516 79.8
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 9.5e-238 827.0 617 67.1
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 2.1e-229 799.3 615 67.2
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 3.7e-226 788.5 574 70.0
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 7.0e-225 784.3 618 64.2
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.2e-224 783.5 620 66.0
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 6.8e-220 767.7 468 80.8
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 9.8e-219 763.8 511 75.7
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 2.3e-207 726.1 529 71.8
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 1.7e-202 709.9 617 57.1
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 2.9e-202 709.1 443 79.0
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.1e-201 707.2 557 66.8
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 3.9e-199 698.7 621 56.8
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 1.1e-188 664.1 616 55.2
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 1.8e-172 610.1 646 49.1
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 6.5e-154 548.5 618 48.2
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 2.5e-153 546.6 358 77.4
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 2.9e-146 523.1 359 74.9
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 1.2e-144 517.7 616 45.5
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.0e-143 513.1 484 59.5
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 1.2e-142 511.1 339 77.0
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 5.0e-138 495.7 364 68.1
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 6.1e-136 488.8 388 65.5
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 8.3e-117 425.2 510 44.5
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 7.0e-116 422.2 597 43.6
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 4.1e-108 396.4 374 59.9
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 2.1e-99 367.5 282 68.1
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 3.4e-94 350.1 454 48.5
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 5.3e-71 273.1 175 78.3
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 2.9e-69 267.3 171 78.4
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 2.1e-67 261.2 186 68.3
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 4.8e-56 223.4 133 81.2
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 4.1e-47 193.7 117 78.6
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 2.2e-45 188.0 140 68.6
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 5.0e-45 186.8 150 62.0
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 2.5e-44 184.5 122 75.4
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 9.4e-44 182.6 149 63.8
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.2e-43 182.2 105 79.0
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.6e-43 181.8 145 62.1
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 3.0e-42 177.6 106 78.3
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 4.7e-35 153.7 178 48.3
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 5.3e-31 140.2 86 82.6
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 5.3e-31 140.2 128 61.7
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 4.7e-27 127.1 59 96.6
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 4.7e-27 127.1 59 96.6
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 1.2e-25 122.5 102 61.8
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 2.2e-24 118.2 107 52.3
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 2.4e-23 114.8 84 70.2
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 1.7e-21 108.6 58 81.0
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 2.5e-20 104.8 78 61.5
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 8.0e-19 99.8 117 57.3
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 8.0e-19 99.8 59 72.9
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 9.8e-17 92.8 76 65.8
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 1.7e-16 92.0 69 58.0
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 2.4e-15 88.2 50 78.0
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 6.5e-13 80.1 71 57.7
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 4.7e-11 73.9 80 48.8
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 6.8e-10 70.1 51 54.9
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 4.4e-09 67.4 46 76.1
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 4.4e-09 67.4 54 57.4
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 4.9e-08 63.9 38 71.1

Acer truncatum (3 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (4 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (5 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings