Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g075810.3 Solanum lycopersicum HOM05D005067 ORTHO05D006105 2.5e-47 191.8 99 100.0
Sopen06g032240 Solanum pennellii HOM05D005067 ORTHO05D006105 2.5e-47 191.8 99 100.0
PGSC0003DMG400030398 Solanum tuberosum HOM05D005067 ORTHO05D006105 9.4e-47 189.9 97 100.0
Nitab4.5_0001953g0110 Nicotiana tabacum HOM05D005067 ORTHO05D006105 7.5e-44 180.3 99 92.9
Nitab4.5_0009655g0030 Nicotiana tabacum HOM05D005067 ORTHO05D006105 3.7e-43 177.9 95 94.7
Nitab4.5_0002882g0010 Nicotiana tabacum HOM05D005067 ORTHO05D006105 8.3e-43 176.8 99 90.9
PGSC0003DMG400015529 Solanum tuberosum HOM05D005067 ORTHO05D006105 2.4e-42 175.3 99 89.9
Peaxi162Scf00679g00133 Petunia axillaris HOM05D005067 ORTHO05D006105 7.0e-42 173.7 95 91.6
Migut.D02119 Erythranthe guttata HOM05D005067 ORTHO05D006105 4.0e-37 157.9 95 81.1
CSS0001472 Camellia sinensis var. sinensis HOM05D005067 ORTHO05D006105 5.2e-37 157.5 99 77.8
Cc01_g12390 Coffea canephora HOM05D005067 ORTHO05D006105 5.2e-37 157.5 99 77.8
RcHm_v2.0_Chr5g0041661 Rosa chinensis HOM05D005067 ORTHO05D006105 5.2e-37 157.5 99 79.8
MSTRG.18590 Avicennia marina HOM05D005067 ORTHO05D006105 6.8e-37 157.1 99 77.8
CSS0007870 Camellia sinensis var. sinensis HOM05D005067 ORTHO05D006105 6.8e-37 157.1 99 77.8
FAN25G2289 Fragaria x ananassa HOM05D005067 ORTHO05D006105 1.2e-36 156.4 99 79.8
Oeu003268.1 Olea europaea HOM05D005067 ORTHO05D006105 1.2e-36 156.4 99 78.8
CiPaw.06G112100 Carya illinoinensis HOM05D005067 ORTHO05D006105 2.6e-36 155.2 99 78.8
Potri.001G071900 Populus trichocarpa HOM05D005067 ORTHO05D006105 3.4e-36 154.8 99 77.8
FvH4_3g23621 Fragaria vesca HOM05D005067 ORTHO05D006105 4.4e-36 154.5 99 78.8
FAN16G3498 Fragaria x ananassa HOM05D005067 ORTHO05D006105 4.4e-36 154.5 99 78.8
Duzib168G1737 Durio zibethinus HOM05D005067 ORTHO05D006105 7.5e-36 153.7 99 78.8
Hma1.2p1_0738F.1_g211080 Hydrangea macrophylla HOM05D005067 ORTHO05D006105 9.8e-36 153.3 99 76.8
vmacro05123 Vaccinium macrocarpon HOM05D005067 ORTHO05D006105 9.8e-36 153.3 99 76.8
COL.COLO4_25264 Corchorus olitorius HOM05D005067 ORTHO05D006105 1.7e-35 152.5 97 77.3
FAN11G0656 Fragaria x ananassa HOM05D001534 ORTHO05D003503 2.2e-35 152.1 98 77.6
Thecc.09G262100 Theobroma cacao HOM05D005067 ORTHO05D006105 2.2e-35 152.1 99 75.8
FAN21G3427 Fragaria x ananassa HOM05D002614 ORTHO05D002794 3.7e-35 151.4 93 80.6
Potri.003G159100 Populus trichocarpa HOM05D005067 ORTHO05D006105 4.9e-35 151.0 97 76.3
Actinidia23110 Actinidia chinensis HOM05D005067 ORTHO05D006105 1.4e-34 149.4 99 73.7
MD03G1192500 Malus domestica HOM05D005067 ORTHO05D006105 1.4e-34 149.4 99 73.7
MD11G1209000 Malus domestica HOM05D005067 ORTHO05D006105 1.4e-34 149.4 99 74.7
Prupe.4G224700 Prunus persica HOM05D005067 ORTHO05D006105 1.4e-34 149.4 99 74.7
Cfa012979 Carpinus fangiana HOM05D005067 ORTHO05D006105 2.4e-34 148.7 99 74.7
Dinv26521 Davidia involucrata HOM05D005067 ORTHO05D006105 2.4e-34 148.7 99 75.8
Haze_21349 Corylus avellana HOM05D005067 ORTHO05D006105 3.1e-34 148.3 99 74.7
TAR723G0001 Trochodendron aralioides HOM05D005067 ORTHO05D006105 3.1e-34 148.3 99 72.7
GSVIVG01001135001 Vitis vinifera HOM05D005067 ORTHO05D006105 3.1e-34 148.3 99 72.7
Gohir.D13G224500 Gossypium hirsutum HOM05D005067 ORTHO05D006105 4.1e-34 147.9 99 73.7
HanXRQChr05g0134241 Helianthus annuus HOM05D005067 ORTHO05D006105 4.1e-34 147.9 99 73.7
Haze_21343 Corylus avellana HOM05D005067 ORTHO05D006105 5.4e-34 147.5 99 73.7
CiPaw.05G096900 Carya illinoinensis HOM05D005067 ORTHO05D006105 7.0e-34 147.1 99 73.7
Gorai.013G255300 Gossypium raimondii HOM05D005067 ORTHO05D006105 7.0e-34 147.1 99 73.7
Psat1g160400 Pisum sativum HOM05D005067 ORTHO05D006105 7.0e-34 147.1 99 72.7
Ca_01855_v3 Cicer arietinum L. HOM05D005067 ORTHO05D006105 9.2e-34 146.7 99 71.7
Manes.08G098600 Manihot esculenta HOM05D005067 ORTHO05D006105 1.2e-33 146.4 99 72.7
Sabra03G0115500 Salix brachista HOM05D005067 ORTHO05D006105 2.7e-33 145.2 93 76.3
CANSAT01G3113 Cannabis sativa HOM05D005067 ORTHO05D006105 3.5e-33 144.8 95 72.6
unitig_736.g22438 Utricularia gibba HOM05D005067 ORTHO05D006105 3.5e-33 144.8 95 73.7
Gohir.A13G220500 Gossypium hirsutum HOM05D005067 ORTHO05D006105 4.5e-33 144.4 99 71.7
Gohir.D09G102100 Gossypium hirsutum HOM05D005067 ORTHO05D006105 4.5e-33 144.4 99 73.7
Lj3g0015814 Lotus japonicus HOM05D005067 ORTHO05D006105 4.5e-33 144.4 97 71.1
TPR.G27257 Trifolium pratense HOM05D005067 ORTHO05D006105 4.5e-33 144.4 99 70.7
Lsat_1_v5_gn_1_32740 Lactuca sativa HOM05D005067 ORTHO05D006105 5.9e-33 144.1 99 70.7
MELO3C026758.2 Cucumis melo HOM05D005067 ORTHO05D006105 7.8e-33 143.7 95 75.8
Gorai.006G119400 Gossypium raimondii HOM05D005067 ORTHO05D006105 1.0e-32 143.3 93 75.3
Duzib150G1019 Durio zibethinus HOM05D005067 ORTHO05D006105 1.7e-32 142.5 99 72.7
Glyma.06G185600 Glycine max HOM05D005067 ORTHO05D006105 1.7e-32 142.5 99 69.7
Glyma.04G179100 Glycine max HOM05D005067 ORTHO05D006105 2.3e-32 142.1 99 69.7
Medtr8g012945 Medicago truncatula HOM05D005067 ORTHO05D006105 2.3e-32 142.1 99 68.7
Phvul.009G181800 Phaseolus vulgaris HOM05D005067 ORTHO05D006105 2.3e-32 142.1 95 72.6
Hund07355 Selenicereus undatus HOM05D005067 ORTHO05D006105 2.9e-32 141.7 99 69.7
TWI18G1269 Tripterygium wilfordii HOM05D005067 ORTHO05D006105 2.9e-32 141.7 97 70.1
Sabra01G0050500 Salix brachista HOM05D005067 ORTHO05D006105 3.8e-32 141.4 120 64.2
Sed0016956 Sechium edule HOM05D005067 ORTHO05D006105 3.8e-32 141.4 95 74.7
AUR62013622 Chenopodium quinoa HOM05D005067 ORTHO05D006105 5.0e-32 141.0 99 67.7
HanXRQChr08g0228171 Helianthus annuus HOM05D005067 ORTHO05D006105 5.0e-32 141.0 99 68.7
PSO541G3634 Papaver somniferum HOM05D005067 ORTHO05D006105 5.0e-32 141.0 99 68.7
Atru.chr12.1484 Acer truncatum HOM05D005067 ORTHO05D006105 6.6e-32 140.6 94 74.5
AUR62004226 Chenopodium quinoa HOM05D005067 ORTHO05D006105 6.6e-32 140.6 99 67.7
Medtr2g034290 Medicago truncatula HOM05D005067 ORTHO05D006105 8.6e-32 140.2 95 70.5
TWI36G0882 Tripterygium wilfordii HOM05D005067 ORTHO05D006105 8.6e-32 140.2 98 70.4
arahy.Tifrunner.gnm1.ann1.35C0M2 Arachis hypogaea HOM05D005067 ORTHO05D006105 1.1e-31 139.8 99 68.7
ATR0582G276 Amborella trichopoda HOM05D005067 ORTHO05D006105 1.5e-31 139.4 99 67.7
PSO675G6660 Papaver somniferum HOM05D005067 ORTHO05D006105 1.5e-31 139.4 99 67.7
arahy.Tifrunner.gnm1.ann1.S7KJ0A Arachis hypogaea HOM05D005067 ORTHO05D006105 1.9e-31 139.0 99 68.7
arahy.Tifrunner.gnm1.ann1.V7S8AY Arachis hypogaea HOM05D005067 ORTHO05D006105 1.9e-31 139.0 99 68.7
TPR.G17128 Trifolium pratense HOM05D005067 ORTHO05D006105 2.5e-31 138.7 99 67.7
Ciclev10026832m.g Citrus clementina HOM05D005067 ORTHO05D006105 3.3e-31 138.3 97 68.0
Sed0000673 Sechium edule HOM05D005067 ORTHO05D006105 3.3e-31 138.3 95 70.5
arahy.Tifrunner.gnm1.ann1.75T26B Arachis hypogaea HOM05D005067 ORTHO05D006105 4.3e-31 137.9 99 67.7
arahy.Tifrunner.gnm1.ann1.MX8VGA Arachis hypogaea HOM05D005067 ORTHO05D006105 4.3e-31 137.9 99 67.7
arahy.Tifrunner.gnm1.ann1.WU9C10 Arachis hypogaea HOM05D005067 ORTHO05D006105 7.3e-31 137.1 99 67.7
Aqoxy5G02883 Aquilegia oxysepala HOM05D005067 ORTHO05D006105 9.5e-31 136.7 99 66.7
SalBow3G2136 Salvia bowleyana HOM05D005067 ORTHO05D006105 9.5e-31 136.7 99 73.7
Lalb_Chr12g0209921 Lupinus albus HOM05D005067 ORTHO05D006105 1.2e-30 136.3 91 70.3
EL10Ac1g00908 Beta vulgaris HOM05D005067 ORTHO05D006105 3.6e-30 134.8 104 64.4
arahy.Tifrunner.gnm1.ann1.48UY8P Arachis hypogaea HOM05D005067 ORTHO05D006105 8.0e-30 133.7 99 65.7
BcaC03g17619 Brassica carinata HOM05D005067 ORTHO05D006105 8.0e-30 133.7 99 64.6
Sp2g18390 Schrenkiella parvula HOM05D005067 ORTHO05D006105 8.0e-30 133.7 99 63.6
A06p39480 Brassica napus HOM05D005067 ORTHO05D006105 1.0e-29 133.3 99 63.6
C07p38790 Brassica napus HOM05D005067 ORTHO05D006105 1.0e-29 133.3 99 63.6
BolC7t44398H Brassica oleracea HOM05D005067 ORTHO05D006105 1.0e-29 133.3 99 63.6
BraA06t26863Z Brassica rapa HOM05D005067 ORTHO05D006105 1.0e-29 133.3 99 63.6
Hund21907 Selenicereus undatus HOM05D005067 ORTHO05D006105 1.0e-29 133.3 113 61.1
PGR102G0153 Punica granatum HOM05D005067 ORTHO05D006105 1.4e-29 132.9 92 66.3
Zm00001eb283340 Zea mays HOM05D005067 ORTHO05D006105 1.4e-29 132.9 98 62.2
arahy.Tifrunner.gnm1.ann1.4NI9N6 Arachis hypogaea HOM05D005067 ORTHO05D006105 2.3e-29 132.1 99 65.7
ECA238G3917 Erigeron canadensis HOM05D005067 ORTHO05D006105 2.3e-29 132.1 88 71.6
THA.LOC104807181 Tarenaya hassleriana HOM05D005067 ORTHO05D006105 3.0e-29 131.7 99 64.6
A02p37170 Brassica napus HOM05D005067 ORTHO05D006105 4.0e-29 131.3 99 63.6
BraA02t08703Z Brassica rapa HOM05D005067 ORTHO05D006105 4.0e-29 131.3 99 63.6
AT5G47890 Arabidopsis thaliana HOM05D005067 ORTHO05D006105 5.2e-29 131.0 95 65.3
Thhalv10005189m.g Eutrema salsugineum HOM05D005067 ORTHO05D006105 5.2e-29 131.0 99 63.6
arahy.Tifrunner.gnm1.ann1.XUTR46 Arachis hypogaea HOM05D005067 ORTHO05D006105 8.9e-29 130.2 99 65.7
BcaC04g23800 Brassica carinata HOM05D005067 ORTHO05D006105 8.9e-29 130.2 99 61.6
C02p56190 Brassica napus HOM05D005067 ORTHO05D006105 8.9e-29 130.2 99 61.6
BolC9t53383H Brassica oleracea HOM05D005067 ORTHO05D006105 8.9e-29 130.2 99 61.6
HPP92_001280 Vanilla planifolia HOM05D005067 ORTHO05D006105 8.9e-29 130.2 99 62.6
Aa31LG3G14180 Aethionema arabicum HOM05D005067 ORTHO05D006105 1.5e-28 129.4 95 63.2
BcaB07g30049 Brassica carinata HOM05D005067 ORTHO05D006105 1.5e-28 129.4 99 61.6
AL8G19880 Arabidopsis lyrata HOM05D005067 ORTHO05D006105 2.6e-28 128.6 95 64.2
C09p04540 Brassica napus HOM05D005067 ORTHO05D006105 2.6e-28 128.6 99 60.6
Zm00001eb345800 Zea mays HOM05D005067 ORTHO05D006105 5.7e-28 127.5 98 59.2
Carub.0014s0003 Capsella rubella HOM05D005067 ORTHO05D006105 1.3e-27 126.3 95 63.2
MBI11_g22246_MAGBIO Magnolia biondii HOM05D005067 ORTHO05D006105 1.3e-27 126.3 91 68.1
CARHR184460 Cardamine hirsuta HOM05D005067 ORTHO05D006105 1.7e-27 125.9 95 63.2
BcaB04g19540 Brassica carinata HOM05D005067 ORTHO05D006105 4.9e-27 124.4 99 58.6
CDE02G2760 Ceratophyllum demersum HOM05D005067 ORTHO05D006105 3.2e-26 121.7 96 61.5
ClCG10G013160 Citrullus lanatus HOM05D005067 ORTHO05D006105 4.1e-26 121.3 146 49.3
Mapoly0012s0093 Marchantia polymorpha HOM05D005067 ORTHO05D006105 2.0e-25 119.0 98 59.2
Eucgr.B03411 Eucalyptus grandis HOM05D005067 ORTHO05D006105 1.0e-24 116.7 102 56.9
CDE02G0654 Ceratophyllum demersum HOM05D005067 ORTHO05D006105 1.7e-24 115.9 89 62.9
BolC2t11675H Brassica oleracea HOM05D005067 ORTHO05D006105 2.3e-24 115.5 135 47.4
TAR718G0005 Trochodendron aralioides HOM05D005067 ORTHO05D006105 3.0e-24 115.2 71 74.6
Gohir.A09G105300 Gossypium hirsutum HOM05D005067 ORTHO05D006105 1.2e-22 109.8 70 72.9
arahy.Tifrunner.gnm1.ann1.AQUA2C Arachis hypogaea HOM05D005067 ORTHO05D006105 2.8e-22 108.6 71 73.2
Glyma.06G272300 Glycine max HOM05D005067 ORTHO05D006105 2.8e-22 108.6 69 73.9
arahy.Tifrunner.gnm1.ann1.8NA9N0 Arachis hypogaea HOM05D005067 ORTHO05D006105 6.2e-22 107.5 78 66.7
Actinidia14133 Actinidia chinensis HOM05D005067 ORTHO05D006105 3.1e-21 105.1 70 70.0
SMO119G0159 Selaginella moellendorffii HOM05D005067 ORTHO05D006105 5.2e-21 104.4 91 57.1
Glyma.02G198800 Glycine max HOM05D005067 ORTHO05D006105 6.8e-21 104.0 61 77.0
Pp3c20_8510 Physcomitrium patens HOM05D005067 ORTHO05D006105 6.8e-21 104.0 91 54.9
unitig_899.g14896 Utricularia gibba HOM05D005067 ORTHO05D006105 8.9e-21 103.6 66 74.2
Sc03g0003970 Simmondsia chinensis HOM05D005067 ORTHO05D006105 3.4e-20 101.7 64 75.0
QL03p047951 Quercus lobata HOM05D005067 ORTHO05D006105 1.3e-19 99.8 66 71.2
Psat0s3432g0200 Pisum sativum HOM05D005067 ORTHO05D006105 8.3e-19 97.1 68 63.2
AagrBONN_evm.TU.Sc2ySwM_117.283 Anthoceros agrestis HOM05D005067 ORTHO05D006105 1.1e-18 96.7 87 55.2
Lalb_Chr07g0194241 Lupinus albus HOM05D005067 ORTHO05D006105 4.1e-18 94.7 66 63.6
SHI02599 Sapria himalayana HOM05D005067 ORTHO05D006105 4.1e-18 94.7 67 65.7
Nitab4.5_0009487g0020 Nicotiana tabacum HOM05D005067 ORTHO05D006105 7.0e-18 94.0 95 63.2
Os04g0310500 Oryza sativa ssp. japonica HOM05D005067 ORTHO05D006105 2.7e-17 92.0 64 64.1
arahy.Tifrunner.gnm1.ann1.P4C6EV Arachis hypogaea HOM05D005067 ORTHO05D006105 3.5e-17 91.7 68 61.8
SEGI_29862 Sequoiadendron giganteum HOM05D005067 ORTHO05D006105 5.0e-16 87.8 64 65.6
Cre16.g679500 Chlamydomonas reinhardtii HOM05D005067 ORTHO05D006105 9.5e-15 83.6 96 42.7
DCAR_005307 Daucus carota HOM05D005067 ORTHO05D006105 2.8e-14 82.0 64 57.8
PRCOL_00006750 Prasinoderma coloniale HOM05D005067 ORTHO05D006105 6.8e-13 77.4 90 40.0
Pp3c23_15790 Physcomitrium patens HOM05D005067 ORTHO05D006105 3.2e-10 68.6 61 52.5
MCO03G395 Micromonas commoda HOM05D005067 ORTHO05D006105 3.9e-08 61.6 81 38.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (12 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (5 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings