Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.0e-217 758.8 385 100.0
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.4e-215 750.7 385 98.7
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.1e-207 724.5 385 94.8
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.1e-167 593.6 385 80.5
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.6e-155 553.1 375 77.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 4.5e-145 518.5 306 83.0
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 5.2e-109 398.7 389 58.9
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.6e-108 396.4 392 56.6
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 3.4e-108 396.0 384 58.3
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 7.5e-108 394.8 382 58.1
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 9.8e-108 394.4 382 58.1
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.5e-105 386.0 386 55.2
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.7e-104 383.6 364 58.0
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 6.6e-104 381.7 386 55.2
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 6.6e-104 381.7 405 53.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.5e-103 379.8 382 56.5
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.6e-102 377.1 369 54.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.1e-101 374.4 387 54.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.1e-101 372.9 383 55.1
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 4.0e-101 372.5 400 53.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 1.2e-100 370.9 392 54.8
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.4e-100 369.4 380 54.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 4.9e-99 365.5 377 54.1
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.4e-98 364.0 370 54.6
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 7.8e-97 358.2 369 52.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.3e-96 357.5 370 56.2
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.0e-96 356.3 393 50.9
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 5.0e-96 355.5 372 52.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 5.0e-96 355.5 381 54.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 6.6e-96 355.1 368 55.2
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 2.5e-95 353.2 377 50.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.3e-95 352.8 365 56.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 7.3e-95 351.7 385 51.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 7.3e-95 351.7 385 51.2
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.6e-94 350.5 377 52.3
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.6e-94 350.5 378 52.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.7e-94 349.0 382 53.7
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 6.2e-94 348.6 394 49.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.1e-93 347.8 378 51.1
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.1e-93 346.3 372 52.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.0e-93 345.9 378 51.3
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 4.0e-93 345.9 386 51.8
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 4.0e-93 345.9 376 52.1
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.0e-93 345.9 384 49.5
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 6.8e-93 345.1 379 51.2
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.5e-92 344.0 382 52.6
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.0e-92 343.6 369 53.1
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.0e-92 343.6 395 50.1
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.6e-92 343.2 377 50.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.6e-92 343.2 373 51.2
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 3.4e-92 342.8 381 52.0
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 7.5e-92 341.7 380 50.0
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.3e-91 340.9 382 50.8
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.3e-91 340.9 334 56.3
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.9e-91 339.7 369 52.8
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.9e-91 339.7 377 52.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 3.7e-91 339.3 382 51.3
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 4.9e-91 339.0 366 50.8
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.9e-91 339.0 394 48.7
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 4.9e-91 339.0 383 52.0
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 4.9e-91 339.0 384 51.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.4e-91 338.6 394 48.7
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 9.2e-90 334.7 381 51.2
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.6e-89 334.0 376 49.2
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.6e-89 334.0 369 52.0
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.7e-89 333.2 386 50.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.7e-89 333.2 389 49.4
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 4.6e-89 332.4 370 51.4
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.3e-88 330.9 370 51.6
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.7e-88 330.5 369 49.1
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.1e-87 327.8 355 50.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.9e-87 327.0 377 50.7
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.6e-87 325.5 203 80.3
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.8e-85 320.5 369 49.6
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-85 320.5 362 51.1
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 3.1e-85 319.7 369 49.9
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 4.0e-85 319.3 369 49.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-83 314.3 371 48.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.2e-83 313.5 373 47.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 3.8e-83 312.8 315 56.8
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 8.4e-83 311.6 371 48.8
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 8.4e-83 311.6 371 48.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.1e-79 301.2 360 50.6
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.2e-78 297.7 456 41.2
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 6.4e-75 285.4 274 54.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 2.4e-74 283.5 385 46.8
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.5e-73 279.6 404 42.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.7e-72 277.3 407 41.5
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.6e-65 252.7 331 42.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 4.8e-62 242.7 573 31.9
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 6.9e-61 238.8 293 46.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.4e-58 231.1 270 47.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 4.3e-55 219.5 240 51.2
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.2e-51 207.2 311 36.7
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 6.5e-51 205.7 225 51.1
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.5e-47 193.7 194 58.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 3.3e-47 193.4 389 35.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.2e-46 190.7 202 53.5
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.1e-45 186.8 373 35.1
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.0e-45 185.3 113 76.1
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.5e-43 179.1 179 55.3
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.1e-37 160.2 196 49.0
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 3.8e-35 153.3 198 44.9
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 4.4e-31 139.8 190 41.1
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.9e-29 132.5 113 58.4
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 1.3e-27 128.3 142 43.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.2e-27 127.5 249 35.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 4.8e-22 109.8 147 42.9
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.1e-21 108.6 132 52.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.1e-10 72.0 102 36.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings