Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g065880.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 5.9e-35 150.2 70 100.0
Medtr0212s0020 Medicago truncatula HOM05D003783 ORTHO05D004568 2.6e-19 98.2 89 58.4
Peaxi162Scf00707g00004 Petunia axillaris HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
Peaxi162Scf02040g00001 Petunia axillaris HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
Solyc00g049210.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
Solyc00g500249.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
Solyc00g500348.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
PGSC0003DMG400016897 Solanum tuberosum HOM05D003783 ORTHO05D004568 1.0e-18 96.3 115 49.6
DCAR_031805 Daucus carota HOM05D003783 ORTHO05D004568 2.9e-18 94.7 115 48.7
DCAR_032429 Daucus carota HOM05D003783 ORTHO05D004568 2.9e-18 94.7 115 48.7
Dinv06713 Davidia involucrata HOM05D003783 ORTHO05D004568 2.9e-18 94.7 115 48.7
CANSAT16G0001 Cannabis sativa HOM05D003783 ORTHO05D004568 1.1e-17 92.8 114 47.4
Nitab4.5_0010936g0010 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.4e-17 92.4 115 46.1
MBI05_g05347_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 3.2e-17 91.3 115 47.0
Nn1g09973 Nelumbo nucifera HOM05D003783 ORTHO05D004568 3.2e-17 91.3 115 47.0
Nn1g10045 Nelumbo nucifera HOM05D003783 ORTHO05D004568 3.2e-17 91.3 115 47.0
Nn1g10116 Nelumbo nucifera HOM05D003783 ORTHO05D004568 3.2e-17 91.3 115 47.0
Nitab4.5_0000128g0160 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.5e-17 90.5 115 47.8
SalBow1G3009 Salvia bowleyana HOM05D003783 ORTHO05D004568 7.2e-17 90.1 115 48.7
CAN.G134.19 Capsicum annuum HOM05D003783 ORTHO05D004568 1.2e-16 89.4 115 46.1
Nitab4.5_0000592g0140 Nicotiana tabacum HOM05D003783 ORTHO05D004568 1.2e-16 89.4 115 47.8
RhsimMtG0005400 Rhododendron simsii HOM05D003783 ORTHO05D004568 1.6e-16 89.0 115 47.0
LjContig00315g0021149 Lotus japonicus HOM05D003783 ORTHO05D004568 2.7e-16 88.2 115 45.2
LjContig00439g0010231 Lotus japonicus HOM05D003783 ORTHO05D004568 2.7e-16 88.2 115 45.2
RcHm_v2.0_Chr6g0258021 Rosa chinensis HOM05D003783 ORTHO05D004568 2.7e-16 88.2 115 45.2
RcHm_v2.0_MTg0498851 Rosa chinensis HOM05D003783 ORTHO05D004568 2.7e-16 88.2 115 45.2
Aqoxy163s002 Aquilegia oxysepala HOM05D003783 ORTHO05D004568 4.7e-16 87.4 115 45.2
Zm00001eb434740 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
Zm00001eb436360 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
Zm00001eb437010 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
Zm00001eb438050 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
Zm00001eb438170 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
Zm00001eb438820 Zea mays HOM05D003783 ORTHO05D004568 4.7e-16 87.4 112 49.1
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea HOM05D003783 ORTHO05D004568 8.0e-16 86.7 115 44.3
MD14G1092300 Malus domestica HOM05D003783 ORTHO05D004568 1.0e-15 86.3 115 45.2
Nn3g20873 Nelumbo nucifera HOM05D003783 ORTHO05D004568 1.0e-15 86.3 115 45.2
Sc11g0004390 Simmondsia chinensis HOM05D003783 ORTHO05D004568 1.0e-15 86.3 115 46.1
MSTRG.27795 Avicennia marina HOM05D003783 ORTHO05D004568 1.4e-15 85.9 106 49.1
CDE02G1256 Ceratophyllum demersum HOM05D003783 ORTHO05D004568 1.4e-15 85.9 115 44.3
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 1.8e-15 85.5 116 45.7
Psat4g179160 Pisum sativum HOM05D003783 ORTHO05D004568 2.3e-15 85.1 115 43.5
Gorai.013G137500 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.7e-15 83.6 116 44.8
SGA_v2.0_scaffold245G44749 Striga asiatica HOM05D003783 ORTHO05D004568 6.7e-15 83.6 115 44.3
CAN.G497.18 Capsicum annuum HOM05D003783 ORTHO05D004568 1.1e-14 82.8 115 44.3
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.1e-14 82.8 114 44.7
HanXRQChr04g0109071 Helianthus annuus HOM05D003783 ORTHO05D004568 1.1e-14 82.8 114 44.7
HanXRQChr08g0236011 Helianthus annuus HOM05D003783 ORTHO05D004568 1.1e-14 82.8 114 44.7
HanXRQChr14g0434351 Helianthus annuus HOM05D003783 ORTHO05D004568 1.1e-14 82.8 114 44.7
HanXRQMTg0579571 Helianthus annuus HOM05D003783 ORTHO05D004568 1.1e-14 82.8 114 44.7
Solyc11g063630.1 Solanum lycopersicum HOM05D003783 ORTHO05D004568 1.5e-14 82.4 110 45.5
AUR62042333 Chenopodium quinoa HOM05D003783 ORTHO05D004568 2.0e-14 82.0 115 44.3
Lsat_1_v5_gn_5_16100 Lactuca sativa HOM05D003783 ORTHO05D004568 2.0e-14 82.0 114 44.7
Lsat_1_v5_gn_8_111800 Lactuca sativa HOM05D003783 ORTHO05D004568 3.3e-14 81.3 114 44.7
Aa31csc549G20 Aethionema arabicum HOM05D003783 ORTHO05D004568 5.7e-14 80.5 142 38.0
HanXRQChr11g0334181 Helianthus annuus HOM05D003783 ORTHO05D004568 5.7e-14 80.5 114 43.9
HanXRQChr17g0544011 Helianthus annuus HOM05D003783 ORTHO05D004568 5.7e-14 80.5 114 43.9
HanXRQChr01g0003471 Helianthus annuus HOM05D003783 ORTHO05D004568 9.7e-14 79.7 114 43.0
HanXRQChr01g0029691 Helianthus annuus HOM05D003783 ORTHO05D004568 9.7e-14 79.7 114 43.9
Ah.01g011790 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.3e-13 79.3 115 42.6
Ah.10g028070 Amaranthus hybridus HOM05D003783 ORTHO05D004568 1.3e-13 79.3 115 42.6
AUR62033936 Chenopodium quinoa HOM05D003783 ORTHO05D004568 1.3e-13 79.3 115 43.5
Lsat_1_v5_gn_7_67781 Lactuca sativa HOM05D003783 ORTHO05D004568 1.7e-13 79.0 114 43.0
CsaV3_UNG210090 Cucumis sativus L. HOM05D003783 ORTHO05D004568 3.7e-13 77.8 115 42.6
SHI36895 Sapria himalayana HOM05D003783 ORTHO05D004568 3.7e-13 77.8 121 39.7
Lsat_1_v5_gn_5_16140 Lactuca sativa HOM05D003783 ORTHO05D004568 4.8e-13 77.4 114 43.0
Lalb_Chr00c29g0408271 Lupinus albus HOM05D003783 ORTHO05D004568 2.4e-12 75.1 116 41.4
SabraMtG0000900 Salix brachista HOM05D003783 ORTHO05D004568 2.4e-12 75.1 113 41.6
Lsat_1_v5_gn_7_99780 Lactuca sativa HOM05D003783 ORTHO05D004568 3.1e-12 74.7 114 41.2
SHI54253 Sapria himalayana HOM05D003783 ORTHO05D004568 7.0e-12 73.6 121 40.5
HanXRQChr09g0246391 Helianthus annuus HOM05D003783 ORTHO05D004568 1.2e-11 72.8 114 41.2
Ah.00g237920 Amaranthus hybridus HOM05D003783 ORTHO05D004568 7.7e-11 70.1 86 46.5
Nitab4.5_0002589g0080 Nicotiana tabacum HOM05D003783 ORTHO05D004568 5.0e-10 67.4 103 40.8
SHI32491 Sapria himalayana HOM05D003783 ORTHO05D004568 5.5e-09 63.9 62 56.5
BcaC09g49589 Brassica carinata HOM05D003783 ORTHO05D004568 1.2e-08 62.8 36 80.6
BolSC28t60306H Brassica oleracea HOM05D003783 ORTHO05D004568 1.2e-08 62.8 36 80.6
BolSC28t60363H Brassica oleracea HOM05D003783 ORTHO05D004568 1.2e-08 62.8 36 80.6
CAN.G1001.41 Capsicum annuum HOM05D003783 ORTHO05D004568 1.2e-08 62.8 36 77.8
Sp3g25860 Schrenkiella parvula HOM05D003783 ORTHO05D004568 1.2e-08 62.8 36 80.6
Nitab4.5_0002739g0140 Nicotiana tabacum HOM05D003783 ORTHO05D015637 1.6e-08 62.4 36 80.6
TPR.G22134 Trifolium pratense HOM05D003783 ORTHO05D004568 1.6e-08 62.4 36 77.8
C01p34860 Brassica napus HOM05D003783 ORTHO05D004568 3.6e-08 61.2 36 77.8
PSO782G0649 Papaver somniferum HOM05D003783 ORTHO05D004568 3.6e-08 61.2 71 49.3
CAN.G1439.6 Capsicum annuum HOM05D003783 ORTHO05D004568 1.0e-07 59.7 47 61.7
PSO135G0232 Papaver somniferum HOM05D003783 ORTHO05D004568 1.0e-07 59.7 69 49.3
BraSC177t45761Z Brassica rapa HOM05D003783 ORTHO05D004568 1.4e-07 59.3 34 79.4
BraSC48t46228Z Brassica rapa HOM05D003783 ORTHO05D004568 1.4e-07 59.3 34 79.4
BraSC48t46298Z Brassica rapa HOM05D003783 ORTHO05D004568 1.4e-07 59.3 34 79.4
BraSC48t46316Z Brassica rapa HOM05D003783 ORTHO05D004568 1.4e-07 59.3 34 79.4
C01p34760 Brassica napus HOM05D003783 ORTHO05D004568 2.3e-07 58.5 36 75.0
Lsat_1_v5_gn_4_139080 Lactuca sativa HOM05D003783 ORTHO05D004568 2.3e-07 58.5 36 75.0
Sopen05g012690 Solanum pennellii HOM05D003783 ORTHO05D004568 2.3e-07 58.5 33 81.8
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 6.7e-07 57.0 50 58.0
Dinv06615 Davidia involucrata HOM05D003783 ORTHO05D011738 6.7e-07 57.0 33 78.8
Nitab4.5_0011099g0020 Nicotiana tabacum HOM05D003783 ORTHO05D004568 2.6e-06 55.1 34 70.6
AL3G44640 Arabidopsis lyrata HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
ATMG00830 Arabidopsis thaliana HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
BcaC09g49580 Brassica carinata HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
BraSC177t45753Z Brassica rapa HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
BraSC48t46252Z Brassica rapa HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
BraSC77t46622Z Brassica rapa HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
CARHR283110 Cardamine hirsuta HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
Thhalv10029166m.g Eutrema salsugineum HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
Peaxi162Scf00720g00065 Petunia axillaris HOM05D003783 ORTHO05D004568 3.3e-06 54.7 35 68.6
Sp3g25620 Schrenkiella parvula HOM05D003783 ORTHO05D004568 3.3e-06 54.7 33 75.8
MBI19_g47479_MAGBIO Magnolia biondii HOM05D003783 ORTHO05D004568 5.7e-06 53.9 33 75.8
PSO675G6716 Papaver somniferum HOM05D003783 ORTHO05D004568 5.7e-06 53.9 71 42.3

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (7 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (5 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (9 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (6 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (6 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (2 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (5 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (6 genes)

Program Settings