Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g064610.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 2.4e-48 195.3 106 100.0
PGSC0003DMG400033149 Solanum tuberosum HOM05D004137 ORTHO05D004804 4.0e-43 177.9 106 87.7
Sopen06g023090 Solanum pennellii HOM05D004137 ORTHO05D004804 5.0e-38 161.0 93 87.1
Nitab4.5_0000528g0100 Nicotiana tabacum HOM05D004137 ORTHO05D004804 1.1e-19 100.1 64 70.3
Nitab4.5_0005935g0010 Nicotiana tabacum HOM05D004137 ORTHO05D004804 1.1e-19 100.1 64 70.3
PGSC0003DMG400037247 Solanum tuberosum HOM05D004137 ORTHO05D004804 2.0e-18 95.9 64 67.2
Solyc11g042440.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 3.7e-17 91.7 64 65.6
Sopen11g018520 Solanum pennellii HOM05D004137 ORTHO05D004804 6.4e-17 90.9 64 65.6
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 1.9e-16 89.4 68 58.8
CANSAT11G0501 Cannabis sativa HOM05D004137 ORTHO05D004804 5.4e-16 87.8 61 65.6
DCAR_023854 Daucus carota HOM05D004137 ORTHO05D004804 9.2e-16 87.0 77 55.8
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 9.2e-16 87.0 79 57.0
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 1.2e-15 86.7 79 58.2
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 2.1e-15 85.9 68 58.8
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 2.7e-15 85.5 60 65.0
CSS0017288 Camellia sinensis var. sinensis HOM05D004137 ORTHO05D004804 6.0e-15 84.3 62 59.7
FAN16G1350 Fragaria x ananassa HOM05D004137 ORTHO05D004804 1.0e-14 83.6 70 60.0
Nn7g35858 Nelumbo nucifera HOM05D004137 ORTHO05D004804 1.0e-14 83.6 79 55.7
FvH4_3g45760 Fragaria vesca HOM05D004137 ORTHO05D004804 3.0e-14 82.0 61 63.9
FAN21G2465 Fragaria x ananassa HOM05D004137 ORTHO05D004804 3.0e-14 82.0 61 63.9
CiPaw.13G177400 Carya illinoinensis HOM05D004137 ORTHO05D004804 3.9e-14 81.6 71 56.3
FAN11G0915 Fragaria x ananassa HOM05D004137 ORTHO05D004804 6.6e-14 80.9 61 62.3
FAN25G2990 Fragaria x ananassa HOM05D004137 ORTHO05D004804 8.6e-14 80.5 69 59.4
HanXRQChr01g0021421 Helianthus annuus HOM05D004137 ORTHO05D004804 8.6e-14 80.5 61 57.4
Lsat_1_v5_gn_1_68820 Lactuca sativa HOM05D004137 ORTHO05D004804 8.6e-14 80.5 62 58.1
RcHm_v2.0_Chr5g0083831 Rosa chinensis HOM05D004137 ORTHO05D004804 8.6e-14 80.5 70 57.1
ECA248G0157 Erigeron canadensis HOM05D004137 ORTHO05D004804 1.5e-13 79.7 62 56.5
Lj4g0013694 Lotus japonicus HOM05D004137 ORTHO05D004804 1.5e-13 79.7 60 55.0
Nn2g15861 Nelumbo nucifera HOM05D004137 ORTHO05D004804 4.3e-13 78.2 70 54.3
Psat7g063840 Pisum sativum HOM05D004137 ORTHO05D004804 4.3e-13 78.2 69 52.2
Migut.N00553 Erythranthe guttata HOM05D004137 ORTHO05D004804 5.6e-13 77.8 73 54.8
Medtr8g088460 Medicago truncatula HOM05D004137 ORTHO05D004804 5.6e-13 77.8 69 49.3
SGA_v2.0_scaffold3G01677 Striga asiatica HOM05D004137 ORTHO05D004804 5.6e-13 77.8 69 55.1
Cc01_g00130 Coffea canephora HOM05D004137 ORTHO05D004804 7.3e-13 77.4 73 53.4
Hma1.2p1_0241F.1_g100550 Hydrangea macrophylla HOM05D004137 ORTHO05D004804 9.5e-13 77.0 64 53.1
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 1.6e-12 76.3 77 50.6
Potri.001G003500 Populus trichocarpa HOM05D004137 ORTHO05D004804 2.1e-12 75.9 73 53.4
TAR623G1005 Trochodendron aralioides HOM05D004137 ORTHO05D004804 2.8e-12 75.5 70 54.3
TWI34G1879 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 1.4e-11 73.2 61 55.7
ATR0737G017 Amborella trichopoda HOM05D004137 ORTHO05D004804 1.8e-11 72.8 78 51.3
Potri.003G221500 Populus trichocarpa HOM05D004137 ORTHO05D004804 2.3e-11 72.4 75 50.7
Ah.13g075420 Amaranthus hybridus HOM05D004137 ORTHO05D004804 3.1e-11 72.0 79 49.4
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 4.0e-11 71.6 67 55.2
TWI60G1175 Tripterygium wilfordii HOM05D004137 ORTHO05D004804 5.2e-11 71.2 60 56.7
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 6.8e-11 70.9 63 52.4
Eucgr.B03601 Eucalyptus grandis HOM05D004137 ORTHO05D004804 8.9e-11 70.5 63 55.6
THA.LOC104811721 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 8.9e-11 70.5 91 45.1
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 1.2e-10 70.1 63 55.6
Lsat_1_v5_gn_2_50221 Lactuca sativa HOM05D004137 ORTHO05D004804 1.2e-10 70.1 70 44.3
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 3.4e-10 68.6 80 43.8
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 3.4e-10 68.6 80 43.8
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 3.4e-10 68.6 62 50.0
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 4.4e-10 68.2 65 50.8
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 7.6e-10 67.4 63 52.4
QL04p040762 Quercus lobata HOM05D004137 ORTHO05D004804 7.6e-10 67.4 54 57.4
Cpa.g.c44905 Carica papaya HOM05D004137 ORTHO05D004804 9.9e-10 67.0 62 54.8
HanXRQChr02g0057501 Helianthus annuus HOM05D004137 ORTHO05D004804 9.9e-10 67.0 60 46.7
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 1.3e-09 66.6 70 45.7
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-09 66.6 70 45.7
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 1.3e-09 66.6 70 45.7
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 2.2e-09 65.9 70 44.3
Thhalv10027319m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 2.2e-09 65.9 63 54.0
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 2.9e-09 65.5 72 47.2
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 2.9e-09 65.5 72 47.2
Carub.0001s4388 Capsella rubella HOM05D004137 ORTHO05D004804 4.9e-09 64.7 79 40.5
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 6.4e-09 64.3 62 51.6
Ciclev10017215m.g Citrus clementina HOM05D004137 ORTHO05D004804 6.4e-09 64.3 64 51.6
Lalb_Chr13g0295561 Lupinus albus HOM05D004137 ORTHO05D004804 8.4e-09 63.9 82 39.0
Manes.15G109500 Manihot esculenta HOM05D004137 ORTHO05D004804 8.4e-09 63.9 70 48.6
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.1e-08 63.5 63 50.8
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 1.4e-08 63.2 80 37.5
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.9e-08 62.8 79 39.2
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 2.4e-08 62.4 61 47.5
BolC1t02148H Brassica oleracea HOM05D004137 ORTHO05D004804 3.2e-08 62.0 63 47.6
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 4.1e-08 61.6 81 39.5
BcaC09g50691 Brassica carinata HOM05D004137 ORTHO05D004804 4.1e-08 61.6 63 47.6
BcaNung02428 Brassica carinata HOM05D004137 ORTHO05D004804 4.1e-08 61.6 63 50.8
vmacro20990 Vaccinium macrocarpon HOM05D004137 ORTHO05D004804 4.1e-08 61.6 61 52.5
AT5G56520 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 5.4e-08 61.2 63 52.4
AT1G55365 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 7.1e-08 60.8 81 38.3
C01p22180 Brassica napus HOM05D004137 ORTHO05D004804 7.1e-08 60.8 63 47.6
Manes.03G087303 Manihot esculenta HOM05D004137 ORTHO05D004804 7.1e-08 60.8 74 45.9
Peaxi162Scf00078g00515 Petunia axillaris HOM05D004137 ORTHO05D004804 7.1e-08 60.8 39 71.8
A08p00680 Brassica napus HOM05D004137 ORTHO05D004804 9.2e-08 60.5 70 41.4
BraA08t32126Z Brassica rapa HOM05D004137 ORTHO05D004804 9.2e-08 60.5 70 41.4
Phvul.002G247400 Phaseolus vulgaris HOM05D004137 ORTHO05D004804 9.2e-08 60.5 66 48.5
C07p54810 Brassica napus HOM05D004137 ORTHO05D004804 1.2e-07 60.1 68 45.6
BolC7t45970H Brassica oleracea HOM05D004137 ORTHO05D004804 1.2e-07 60.1 68 45.6
Glyma.08G125200 Glycine max HOM05D004137 ORTHO05D004804 1.2e-07 60.1 81 43.2
AL8G32280 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.6e-07 59.7 63 49.2
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 1.6e-07 59.7 74 40.5
VMungo1383G2992 Vigna mungo HOM05D001291 ORTHO05D004804 1.6e-07 59.7 79 43.0
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 2.1e-07 59.3 70 42.9
BraA01t01711Z Brassica rapa HOM05D004137 ORTHO05D004804 2.1e-07 59.3 101 35.6
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 2.7e-07 58.9 74 40.5
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 3.5e-07 58.5 74 40.5
Sed0012847 Sechium edule HOM05D004137 ORTHO05D004804 3.5e-07 58.5 61 42.6
BcaC08g44196 Brassica carinata HOM05D004137 ORTHO05D004804 4.6e-07 58.2 64 37.5
A05p17500 Brassica napus HOM05D004137 ORTHO05D004804 4.6e-07 58.2 64 37.5
BolC6t36802H Brassica oleracea HOM05D004137 ORTHO05D004804 4.6e-07 58.2 64 37.5
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 4.6e-07 58.2 81 42.0
unitig_0.g1150 Utricularia gibba HOM05D004137 ORTHO05D004804 4.6e-07 58.2 62 46.8
BcaC06g32758 Brassica carinata HOM05D004137 ORTHO05D004804 6.0e-07 57.8 68 44.1
BraA03t14731Z Brassica rapa HOM05D004137 ORTHO05D004804 6.0e-07 57.8 68 44.1
Thhalv10015369m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 7.8e-07 57.4 71 45.1
BcaC04g20079 Brassica carinata HOM05D004137 ORTHO05D004804 1.3e-06 56.6 63 47.6
A03p56610 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-06 56.6 68 42.6
A10p13890 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-06 56.6 63 46.0
C09p48110 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-06 56.6 63 47.6
BolC9t57661H Brassica oleracea HOM05D004137 ORTHO05D004804 1.3e-06 56.6 63 47.6
BraA10t43481Z Brassica rapa HOM05D004137 ORTHO05D004804 1.3e-06 56.6 63 46.0
Aa31LG3G12400 Aethionema arabicum HOM05D004137 ORTHO05D004804 1.7e-06 56.2 63 42.9
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 1.7e-06 56.2 70 41.4
A01p17580 Brassica napus HOM05D004137 ORTHO05D004804 2.3e-06 55.8 63 46.0
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 3.0e-06 55.5 80 36.2
Cfa016445 Carpinus fangiana HOM05D001721 ORTHO05D001804 3.0e-06 55.5 55 47.3
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 3.0e-06 55.5 69 44.9
Haze_19423 Corylus avellana HOM05D004137 ORTHO05D004804 3.0e-06 55.5 55 47.3
Carub.0008s1700 Capsella rubella HOM05D004137 ORTHO05D004804 3.9e-06 55.1 63 46.0
Lalb_Chr07g0185901 Lupinus albus HOM05D004137 ORTHO05D004804 6.6e-06 54.3 58 41.4
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 8.6e-06 53.9 79 36.7
Gohir.D12G178750 Gossypium hirsutum HOM05D004137 ORTHO05D004804 8.6e-06 53.9 61 42.6
Gorai.008G191500 Gossypium raimondii HOM05D004137 ORTHO05D004804 8.6e-06 53.9 61 42.6

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (8 genes)
Brassica napus (11 genes)
Brassica oleracea (6 genes)
Brassica rapa (5 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (3 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (0 genes)
Corylus avellana (2 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (3 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (4 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (3 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (3 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings