Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g050200.2 Solanum lycopersicum HOM05D004766 ORTHO05D006159 1.1e-125 453.4 234 100.0
PGSC0003DMG400024309 Solanum tuberosum HOM05D004766 ORTHO05D006159 9.8e-103 377.1 251 81.3
CAN.G169.5 Capsicum annuum HOM05D004766 ORTHO05D006159 7.3e-90 334.3 250 72.0
Nitab4.5_0003695g0010 Nicotiana tabacum HOM05D004766 ORTHO05D006159 5.2e-88 328.2 246 73.2
Nitab4.5_0000109g0520 Nicotiana tabacum HOM05D004766 ORTHO05D006159 8.9e-88 327.4 246 73.2
Peaxi162Scf00739g00014 Petunia axillaris HOM05D004766 ORTHO05D006159 4.9e-86 321.6 250 69.2
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 9.6e-82 307.4 250 65.6
Actinidia29749 Actinidia chinensis HOM05D004766 ORTHO05D006159 2.6e-79 299.3 250 63.2
Cc02_g05520 Coffea canephora HOM05D004766 ORTHO05D006159 7.6e-79 297.7 250 63.2
Sopen06g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-78 297.0 201 81.6
MSTRG.178 Avicennia marina HOM05D004766 ORTHO05D006159 1.7e-78 296.6 250 64.4
Dinv26060 Davidia involucrata HOM05D004766 ORTHO05D006159 2.9e-78 295.8 250 63.2
Hma1.2p1_2838F.1_g329300 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 1.9e-77 293.1 250 63.2
Oeu054426.2 Olea europaea HOM05D004766 ORTHO05D006159 1.6e-76 290.0 250 62.0
CiPaw.01G306100 Carya illinoinensis HOM05D004766 ORTHO05D006159 2.1e-76 289.7 250 59.6
Migut.F01258 Erythranthe guttata HOM05D004766 ORTHO05D006159 3.5e-76 288.9 249 61.8
SalBow5G3937 Salvia bowleyana HOM05D004766 ORTHO05D006159 7.9e-76 287.7 250 60.0
Lj8C56T7 Lonicera japonica HOM05D004766 ORTHO05D006159 1.0e-75 287.3 249 60.6
GSVIVG01032703001 Vitis vinifera HOM05D004766 ORTHO05D006159 1.0e-75 287.3 250 61.6
Eucgr.J00130 Eucalyptus grandis HOM05D004766 ORTHO05D006159 1.8e-75 286.6 250 60.8
arahy.Tifrunner.gnm1.ann1.4BS23W Arachis hypogaea HOM05D004766 ORTHO05D006159 3.9e-75 285.4 250 59.2
vmacro09973 Vaccinium macrocarpon HOM05D004766 ORTHO05D006159 5.1e-75 285.0 250 60.4
SGA_v2.0_scaffold275G46605 Striga asiatica HOM05D004766 ORTHO05D006159 8.7e-75 284.3 259 59.1
Ca_16870_v3 Cicer arietinum L. HOM05D004766 ORTHO05D006159 2.5e-74 282.7 250 58.8
Lalb_Chr11g0067831 Lupinus albus HOM05D004766 ORTHO05D006159 2.5e-74 282.7 250 59.2
arahy.Tifrunner.gnm1.ann1.GHXG56 Arachis hypogaea HOM05D004766 ORTHO05D006159 3.3e-74 282.3 250 58.8
Ciclev10033572m.g Citrus clementina HOM05D004766 ORTHO05D006159 3.3e-74 282.3 250 58.8
Rhsim09G0184400 Rhododendron simsii HOM05D004766 ORTHO05D006159 3.3e-74 282.3 250 60.0
QL08p064773 Quercus lobata HOM05D004766 ORTHO05D006159 4.3e-74 282.0 250 58.4
Glyma.06G143400 Glycine max HOM05D004766 ORTHO05D006159 5.6e-74 281.6 251 59.0
Atru.chr12.159 Acer truncatum HOM05D004766 ORTHO05D006159 7.4e-74 281.2 250 59.2
Prupe.2G263500 Prunus persica HOM05D004766 ORTHO05D006159 3.6e-73 278.9 250 60.4
Sabra19G0071700 Salix brachista HOM05D004766 ORTHO05D006159 4.8e-73 278.5 250 57.6
Ah.16g104280 Amaranthus hybridus HOM05D004766 ORTHO05D006159 1.8e-72 276.6 250 61.2
HanXRQChr08g0222571 Helianthus annuus HOM05D004766 ORTHO05D006159 2.4e-72 276.2 250 58.4
DCAR_010519 Daucus carota HOM05D004766 ORTHO05D006159 3.1e-72 275.8 249 58.6
Potri.019G056200 Populus trichocarpa HOM05D004766 ORTHO05D006159 3.1e-72 275.8 250 57.6
Lalb_Chr08g0239111 Lupinus albus HOM05D004766 ORTHO05D006159 4.0e-72 275.4 250 57.2
RcHm_v2.0_Chr1g0372121 Rosa chinensis HOM05D004766 ORTHO05D006159 4.0e-72 275.4 250 59.6
Manes.07G137600 Manihot esculenta HOM05D004766 ORTHO05D006159 5.3e-72 275.0 250 58.4
AUR62012360 Chenopodium quinoa HOM05D004766 ORTHO05D006159 6.9e-72 274.6 250 59.6
FvH4_7g25850 Fragaria vesca HOM05D004766 ORTHO05D006159 9.0e-72 274.2 250 60.0
FAN06G4224 Fragaria x ananassa HOM05D004766 ORTHO05D006159 9.0e-72 274.2 250 60.0
FAN10G2197 Fragaria x ananassa HOM05D004766 ORTHO05D006159 9.0e-72 274.2 250 60.0
EL10Ac2g04254 Beta vulgaris HOM05D004766 ORTHO05D006159 1.5e-71 273.5 250 59.6
FAN03G3241 Fragaria x ananassa HOM05D004766 ORTHO05D006159 1.5e-71 273.5 250 60.0
TAR636G0335 Trochodendron aralioides HOM05D004766 ORTHO05D006159 1.5e-71 273.5 250 58.0
Glyma.04G222000 Glycine max HOM05D004766 ORTHO05D006159 7.6e-71 271.2 250 57.6
Nn5g26881 Nelumbo nucifera HOM05D004766 ORTHO05D006159 7.6e-71 271.2 251 58.6
Cfa001212 Carpinus fangiana HOM05D004766 ORTHO05D006159 1.3e-70 270.4 250 56.4
Haze_17351 Corylus avellana HOM05D004766 ORTHO05D006159 1.3e-70 270.4 250 56.4
Thecc.10G183900 Theobroma cacao HOM05D004766 ORTHO05D006159 1.3e-70 270.4 250 57.2
CsaV3_6G002240 Cucumis sativus L. HOM05D004766 ORTHO05D006159 1.7e-70 270.0 250 57.6
MD07G1233000 Malus domestica HOM05D004766 ORTHO05D006159 1.7e-70 270.0 250 59.2
Nn2g10346 Nelumbo nucifera HOM05D004766 ORTHO05D006159 2.2e-70 269.6 250 57.2
VMungo1309G2839 Vigna mungo HOM05D004766 ORTHO05D006159 2.2e-70 269.6 257 57.2
Phvul.009G142700 Phaseolus vulgaris HOM05D004766 ORTHO05D006159 3.8e-70 268.9 250 57.2
MELO3C020001.2 Cucumis melo HOM05D004766 ORTHO05D006159 4.9e-70 268.5 250 57.2
MD01G1166300 Malus domestica HOM05D004766 ORTHO05D006159 6.4e-70 268.1 250 58.4
Sed0017451 Sechium edule HOM05D004766 ORTHO05D006159 6.4e-70 268.1 250 57.2
AUR62031489 Chenopodium quinoa HOM05D004766 ORTHO05D006159 8.4e-70 267.7 250 58.4
Hund13464 Selenicereus undatus HOM05D004766 ORTHO05D006159 1.1e-69 267.3 250 58.8
TPR.G16138 Trifolium pratense HOM05D004766 ORTHO05D006159 1.1e-69 267.3 250 56.0
Gohir.A13G007600 Gossypium hirsutum HOM05D004766 ORTHO05D006159 3.2e-69 265.8 250 56.4
TAR633G2654 Trochodendron aralioides HOM05D004766 ORTHO05D006159 7.1e-69 264.6 250 57.2
Gohir.D13G007700 Gossypium hirsutum HOM05D004766 ORTHO05D006159 9.3e-69 264.2 250 56.4
PGR142G0390 Punica granatum HOM05D004766 ORTHO05D006159 9.3e-69 264.2 249 57.0
Gorai.013G008100 Gossypium raimondii HOM05D004766 ORTHO05D006159 1.2e-68 263.8 250 56.4
ECA233G3027 Erigeron canadensis HOM05D004766 ORTHO05D006159 1.6e-68 263.5 250 58.8
TWI09G0270 Tripterygium wilfordii HOM05D004766 ORTHO05D006159 1.6e-68 263.5 250 57.6
Medtr3g094070 Medicago truncatula HOM05D004766 ORTHO05D006159 2.7e-68 262.7 250 56.8
THA.LOC104812375 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 2.7e-68 262.7 250 56.4
Psat5g069120 Pisum sativum HOM05D004766 ORTHO05D006159 4.6e-68 261.9 250 54.0
PSO339G1431 Papaver somniferum HOM05D004766 ORTHO05D006159 7.9e-68 261.2 250 56.8
HanXRQChr17g0560771 Helianthus annuus HOM05D004766 ORTHO05D006159 1.3e-67 260.4 250 56.8
CSS0019433 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 1.8e-67 260.0 322 47.8
PSO384G4442 Papaver somniferum HOM05D004766 ORTHO05D006159 2.3e-67 259.6 250 56.8
Duzib128G1614 Durio zibethinus HOM05D004766 ORTHO05D006159 3.0e-67 259.2 250 56.4
Aa31LG10G11180 Aethionema arabicum HOM05D004766 ORTHO05D006159 3.9e-67 258.8 250 56.4
Aqoxy4G02363 Aquilegia oxysepala HOM05D004766 ORTHO05D006159 3.9e-67 258.8 250 56.0
CARHR135660 Cardamine hirsuta HOM05D004766 ORTHO05D006159 5.1e-67 258.5 250 54.8
Cpa.g.sc19.83 Carica papaya HOM05D004766 ORTHO05D006159 8.7e-67 257.7 250 55.6
BcaB06g29150 Brassica carinata HOM05D004766 ORTHO05D006159 7.4e-66 254.6 250 54.8
BcaC02g07319 Brassica carinata HOM05D004766 ORTHO05D006159 7.4e-66 254.6 250 54.8
C04p68390 Brassica napus HOM05D004766 ORTHO05D006159 7.4e-66 254.6 250 54.8
BolC4t28340H Brassica oleracea HOM05D000154 ORTHO05D000092 7.4e-66 254.6 250 54.8
Carub.0004s2277 Capsella rubella HOM05D004766 ORTHO05D006159 7.4e-66 254.6 250 55.6
A04p31000 Brassica napus HOM05D004766 ORTHO05D006159 9.6e-66 254.2 250 54.8
BraA04t18557Z Brassica rapa HOM05D000154 ORTHO05D000092 9.6e-66 254.2 250 54.8
Thhalv10016414m.g Eutrema salsugineum HOM05D004766 ORTHO05D006159 9.6e-66 254.2 250 54.0
Lsat_1_v5_gn_8_13521 Lactuca sativa HOM05D004766 ORTHO05D006159 9.6e-66 254.2 250 57.2
THA.LOC104803295 Tarenaya hassleriana HOM05D004766 ORTHO05D006159 1.3e-65 253.8 250 54.8
SHI28878 Sapria himalayana HOM05D004766 ORTHO05D006159 2.8e-65 252.7 250 54.4
AL4G38400 Arabidopsis lyrata HOM05D004766 ORTHO05D006159 3.7e-65 252.3 250 54.0
CANSAT56G1075 Cannabis sativa HOM05D004766 ORTHO05D006159 3.7e-65 252.3 250 55.6
MBI15_g35105_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D006159 1.8e-64 250.0 252 53.2
AT2G40550 Arabidopsis thaliana HOM05D004766 ORTHO05D006159 4.0e-64 248.8 250 53.6
Sp4g22880 Schrenkiella parvula HOM05D004766 ORTHO05D006159 5.3e-64 248.4 249 53.8
SpUn0061_0030 Schrenkiella parvula HOM05D004766 ORTHO05D006159 5.3e-64 248.4 249 53.8
Lj1g0018162 Lotus japonicus HOM05D004766 ORTHO05D006159 4.2e-61 238.8 251 51.8
CDE12G0671 Ceratophyllum demersum HOM05D004766 ORTHO05D006159 2.7e-60 236.1 246 52.8
Hma1.2p1_2838F.1_g329290 Hydrangea macrophylla HOM05D004766 ORTHO05D006159 3.0e-59 232.6 192 63.5
unitig_90.g27573 Utricularia gibba HOM05D004766 ORTHO05D006159 1.1e-58 230.7 251 51.4
HPP92_018094 Vanilla planifolia HOM05D004766 ORTHO05D006159 2.5e-58 229.6 250 52.8
FAN01G2723 Fragaria x ananassa HOM05D004766 ORTHO05D006159 3.3e-58 229.2 201 60.2
ClCG11G005730 Citrullus lanatus HOM05D004766 ORTHO05D006159 9.6e-58 227.6 201 58.2
Actinidia31615 Actinidia chinensis HOM05D004766 ORTHO05D006159 1.3e-57 227.3 250 53.2
ATR0681G084 Amborella trichopoda HOM05D004766 ORTHO05D006159 2.8e-57 226.1 251 49.0
Sc10g0002920 Simmondsia chinensis HOM05D004766 ORTHO05D006159 1.1e-56 224.2 201 60.2
Os01g0166800 Oryza sativa ssp. japonica HOM05D004766 ORTHO05D006159 2.5e-53 213.0 247 46.2
COL.COLO4_19454 Corchorus olitorius HOM05D004766 ORTHO05D006159 7.2e-53 211.5 192 58.3
MD01G1183300 Malus domestica HOM05D004766 ORTHO05D006159 3.6e-52 209.1 245 53.1
C04p02090 Brassica napus HOM05D004766 ORTHO05D006159 2.3e-51 206.5 237 48.5
SEGI_19414 Sequoiadendron giganteum HOM05D004766 ORTHO05D006159 1.5e-50 203.8 251 46.6
Zm00001eb123270 Zea mays HOM05D004766 ORTHO05D006159 2.2e-49 199.9 247 43.7
Actinidia33880 Actinidia chinensis HOM05D004766 ORTHO05D006159 6.3e-41 171.8 197 50.3
Pp3c21_8640 Physcomitrium patens HOM05D004766 ORTHO05D006159 2.0e-39 166.8 253 40.3
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis HOM05D004766 ORTHO05D006159 3.4e-39 166.0 252 41.7
SMO347G0133 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 6.5e-38 161.8 254 41.3
SalBow5G1700 Salvia bowleyana HOM05D004766 ORTHO05D006159 5.5e-37 158.7 242 41.7
BcaC02g12598 Brassica carinata HOM05D004766 ORTHO05D006159 1.0e-35 154.5 165 51.5
CSS0047727 Camellia sinensis var. sinensis HOM05D004766 ORTHO05D006159 2.3e-35 153.3 170 49.4
BcaC02g12723 Brassica carinata HOM05D000154 ORTHO05D000092 5.7e-34 148.7 192 45.8
Dinv21784 Davidia involucrata HOM05D004766 ORTHO05D006159 2.8e-33 146.4 108 68.5
Mapoly0030s0020 Marchantia polymorpha HOM05D004766 ORTHO05D006159 4.5e-31 139.0 253 35.6
SMO347G0333 Selaginella moellendorffii HOM05D004766 ORTHO05D006159 5.0e-30 135.6 255 38.8
CBR_g29836 Chara braunii HOM05D004766 ORTHO05D006159 7.5e-26 121.7 219 35.2
BolC4t21721H Brassica oleracea HOM05D004766 ORTHO05D006159 2.8e-25 119.8 121 51.2
A05p01790 Brassica napus HOM05D004766 ORTHO05D006159 1.1e-24 117.9 126 50.8
BraA05t19176Z Brassica rapa HOM05D004766 ORTHO05D006159 4.7e-20 102.4 114 50.0
MCO09G187 Micromonas commoda HOM05D004766 ORTHO05D006159 1.0e-19 101.3 254 32.3
Peaxi162Scf00041g01211 Petunia axillaris HOM05D004766 ORTHO05D006159 1.4e-16 90.9 93 54.8
BolC4t21857H Brassica oleracea HOM05D000154 ORTHO05D000092 2.7e-15 86.7 99 47.5
MBI11_g31297_MAGBIO Magnolia biondii HOM05D004766 ORTHO05D000022 2.3e-14 83.6 77 51.9
PRCOL_00003324 Prasinoderma coloniale HOM05D004766 ORTHO05D006159 6.3e-09 65.5 210 29.0
Nn1g07504 Nelumbo nucifera HOM05D004766 ORTHO05D006159 1.3e-06 57.8 43 60.5

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (3 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings