Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.3e-83 311.6 151 100.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 6.8e-81 303.9 151 98.0
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.2e-77 293.1 151 95.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 7.3e-75 283.9 151 92.1
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.6e-74 282.7 149 90.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.4e-73 279.6 149 89.3
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 3.2e-62 241.9 153 80.4
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 7.4e-59 230.7 141 80.1
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 3.1e-57 225.3 149 72.5
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.0e-57 224.9 141 75.2
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 6.9e-57 224.2 149 71.8
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 9.0e-57 223.8 140 79.3
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 9.0e-57 223.8 140 79.3
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 2.0e-56 222.6 146 76.7
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.0e-56 222.6 142 76.1
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 3.4e-56 221.9 142 74.6
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 9.9e-56 220.3 143 74.1
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.3e-55 219.9 135 78.5
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.3e-55 219.9 142 74.6
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 2.2e-55 219.2 142 71.8
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.2e-55 219.2 146 74.0
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 2.9e-55 218.8 145 73.8
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 3.8e-55 218.4 142 74.6
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 4.9e-55 218.0 135 77.8
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 6.4e-55 217.6 142 75.4
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 6.4e-55 217.6 180 63.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 6.4e-55 217.6 143 73.4
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 8.4e-55 217.2 142 71.8
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.1e-54 216.9 137 78.1
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.1e-54 216.9 150 70.0
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.1e-54 216.9 133 77.4
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 3.2e-54 215.3 163 66.3
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.2e-54 214.9 151 67.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 5.5e-54 214.5 139 77.7
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 9.3e-54 213.8 139 77.7
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.2e-53 213.4 177 63.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.6e-53 213.0 144 69.4
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-53 213.0 142 71.1
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.6e-53 213.0 146 69.9
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 2.1e-53 212.6 164 63.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.7e-53 212.2 150 70.0
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 3.5e-53 211.8 142 71.1
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 4.6e-53 211.5 149 67.1
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 6.0e-53 211.1 148 68.9
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.0e-52 210.3 148 68.2
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.8e-52 209.5 142 70.4
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 1.8e-52 209.5 141 73.0
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 3.0e-52 208.8 143 72.0
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 3.9e-52 208.4 156 64.7
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.9e-52 208.4 141 69.5
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 5.1e-52 208.0 132 76.5
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 6.7e-52 207.6 160 65.6
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 6.7e-52 207.6 141 71.6
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 8.7e-52 207.2 147 68.0
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 8.7e-52 207.2 158 67.1
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.1e-51 206.8 149 67.8
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.5e-51 206.5 141 70.2
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 2.5e-51 205.7 134 74.6
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 3.3e-51 205.3 155 63.9
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 3.3e-51 205.3 154 67.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 5.6e-51 204.5 162 64.8
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.6e-51 203.8 159 66.7
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 9.6e-51 203.8 155 66.5
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.6e-50 203.0 152 65.8
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 3.7e-50 201.8 144 64.6
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 3.7e-50 201.8 157 61.1
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 4.8e-50 201.4 148 66.9
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 4.8e-50 201.4 151 64.9
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 8.1e-50 200.7 141 64.5
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 8.1e-50 200.7 159 66.0
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.1e-49 200.3 149 67.8
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.4e-49 199.9 138 71.7
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.4e-49 199.9 142 68.3
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.4e-49 199.9 146 66.4
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.4e-49 199.9 143 67.1
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.4e-49 199.9 151 67.5
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.4e-49 199.9 151 67.5
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 1.8e-49 199.5 156 60.3
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.8e-49 199.5 143 69.2
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.4e-49 199.1 164 61.0
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.4e-49 199.1 164 61.0
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 6.9e-49 197.6 155 62.6
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 9.0e-49 197.2 163 59.5
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 3.4e-48 195.3 147 66.0
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 5.8e-48 194.5 164 59.1
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 5.8e-48 194.5 142 67.6
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 5.8e-48 194.5 149 65.8
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 5.8e-48 194.5 159 61.6
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 7.6e-48 194.1 145 66.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 1.0e-47 193.7 165 60.6
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.9e-47 191.4 180 58.9
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.9e-46 189.5 173 60.7
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 2.5e-46 189.1 151 62.9
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.2e-46 188.7 173 60.1
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 4.2e-46 188.3 165 60.0
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 4.2e-46 188.3 148 63.5
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 5.5e-46 188.0 139 63.3
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 3.5e-45 185.3 138 63.8
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 2.3e-44 182.6 191 51.3
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.1e-43 180.3 125 64.0
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.1e-43 180.3 125 64.0
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.9e-43 179.5 144 61.1
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.6e-42 176.4 151 59.6
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.8e-42 174.9 190 51.1
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 4.1e-41 171.8 205 47.3
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 6.5e-39 164.5 133 59.4
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 6.1e-37 157.9 136 57.4
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 2.3e-36 156.0 158 51.9
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.4e-33 146.7 141 55.3
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 3.1e-33 145.6 146 52.7
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 6.9e-33 144.4 133 59.4
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 7.7e-32 141.0 156 49.4
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.0e-31 140.6 134 54.5
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.0e-28 129.0 150 45.3
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.0e-28 129.0 150 45.3
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.1e-27 127.1 140 47.9
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.0e-24 116.3 132 45.5
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.0e-23 114.0 80 72.5
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 7.2e-22 107.8 131 46.6
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.4e-20 103.6 135 43.0
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 5.2e-20 101.7 67 76.1
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 6.7e-20 101.3 62 74.2
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.7e-18 96.7 64 68.8
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 3.6e-13 79.0 75 57.3
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.6e-08 63.5 117 27.4

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings