Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g078220.3 Solanum lycopersicum HOM05D000702 ORTHO05D392485 1.3e-35 152.5 80 100.0
Sopen04g031840 Solanum pennellii HOM05D000702 ORTHO05D001796 2.8e-25 118.2 63 96.8
PGSC0003DMG400023310 Solanum tuberosum HOM05D000702 ORTHO05D001796 1.1e-24 116.3 63 96.8
Nitab4.5_0003564g0050 Nicotiana tabacum HOM05D000702 ORTHO05D001796 3.4e-23 111.3 63 90.5
Nitab4.5_0000934g0200 Nicotiana tabacum HOM05D000702 ORTHO05D001796 2.2e-22 108.6 63 88.9
CAN.G1054.12 Capsicum annuum HOM05D000702 ORTHO05D001796 1.1e-21 106.3 63 87.3
Peaxi162Scf00081g00064 Petunia axillaris HOM05D000702 ORTHO05D001796 2.7e-20 101.7 70 80.0
Peaxi162Scf00081g00716 Petunia axillaris HOM05D000702 ORTHO05D001796 4.4e-18 94.4 70 75.7
vmacro21463 Vaccinium macrocarpon HOM05D000702 ORTHO05D001796 6.7e-11 70.5 63 61.9
Oeu022064.1 Olea europaea HOM05D000702 ORTHO05D001796 1.1e-10 69.7 55 65.5
Oeu044312.3 Olea europaea HOM05D000702 ORTHO05D001796 1.1e-10 69.7 57 63.2
CSS0004419 Camellia sinensis var. sinensis HOM05D000702 ORTHO05D001796 1.5e-10 69.3 46 71.7
Rhsim06G0058600 Rhododendron simsii HOM05D000702 ORTHO05D001796 1.5e-10 69.3 46 73.9
Atru.chr13.791 Acer truncatum HOM05D000702 ORTHO05D001796 1.7e-09 65.9 47 68.1
Actinidia22671 Actinidia chinensis HOM05D000702 ORTHO05D001796 1.7e-09 65.9 46 69.6
CiPaw.15G046500 Carya illinoinensis HOM05D000702 ORTHO05D001796 2.2e-09 65.5 45 66.7
Dinv44991 Davidia involucrata HOM05D000702 ORTHO05D001796 2.2e-09 65.5 47 70.2
Cpa.g.sc21.126 Carica papaya HOM05D000702 ORTHO05D001796 3.7e-09 64.7 50 58.0
Cfa017884 Carpinus fangiana HOM05D000702 ORTHO05D001796 4.8e-09 64.3 45 66.7
Sc02g0007680 Simmondsia chinensis HOM05D000702 ORTHO05D001796 4.8e-09 64.3 45 68.9
Haze_18282 Corylus avellana HOM05D000702 ORTHO05D001796 6.3e-09 63.9 45 66.7
Duzib093G1780 Durio zibethinus HOM05D000702 ORTHO05D001796 6.3e-09 63.9 47 63.8
Ca_15921_v3 Cicer arietinum L. HOM05D000702 ORTHO05D001796 8.2e-09 63.5 47 66.0
DCAR_020083 Daucus carota HOM05D000702 ORTHO05D001796 8.2e-09 63.5 45 68.9
Oeu022065.2 Olea europaea HOM05D000702 ORTHO05D001796 8.2e-09 63.5 48 68.8
Sc16g0001510 Simmondsia chinensis HOM05D000702 ORTHO05D001796 1.1e-08 63.2 47 63.8
TPR.G25576 Trifolium pratense HOM05D000702 ORTHO05D001796 1.1e-08 63.2 47 66.0
MSTRG.24360 Avicennia marina HOM05D000702 ORTHO05D001796 1.4e-08 62.8 60 60.0
Cc10_g05410 Coffea canephora HOM05D000702 ORTHO05D001796 1.4e-08 62.8 47 66.0
Medtr3g102620 Medicago truncatula HOM05D000702 ORTHO05D001796 1.4e-08 62.8 47 66.0
Cc10_g05440 Coffea canephora HOM05D000702 ORTHO05D001796 1.8e-08 62.4 60 56.7
Lj4A761G89 Lonicera japonica HOM05D000702 ORTHO05D001796 1.8e-08 62.4 46 63.0
SGA_v2.0_scaffold28G11815 Striga asiatica HOM05D000702 ORTHO05D001796 1.8e-08 62.4 57 56.1
Lj3g0018464 Lotus japonicus HOM05D000702 ORTHO05D001796 2.4e-08 62.0 46 63.0
EL10As7g23820 Beta vulgaris HOM05D000702 ORTHO05D001796 4.1e-08 61.2 47 55.3
CAN.G1054.11 Capsicum annuum HOM05D000702 ORTHO05D001796 4.1e-08 61.2 46 60.9
Migut.C00511 Erythranthe guttata HOM05D000702 ORTHO05D001796 4.1e-08 61.2 45 66.7
Gohir.A05G207200 Gossypium hirsutum HOM05D000702 ORTHO05D001796 4.1e-08 61.2 47 63.8
Gohir.D05G210600 Gossypium hirsutum HOM05D000702 ORTHO05D001796 4.1e-08 61.2 47 63.8
Gorai.009G217100 Gossypium raimondii HOM05D000702 ORTHO05D001796 4.1e-08 61.2 47 63.8
arahy.Tifrunner.gnm1.ann1.TDQ3HL Arachis hypogaea HOM05D000702 ORTHO05D001796 5.3e-08 60.8 47 61.7
arahy.Tifrunner.gnm1.ann1.TIU0MY Arachis hypogaea HOM05D000702 ORTHO05D001796 5.3e-08 60.8 47 61.7
Lj1g0010352 Lotus japonicus HOM05D000702 ORTHO05D001796 5.3e-08 60.8 46 65.2
Phvul.009G069700 Phaseolus vulgaris HOM05D000702 ORTHO05D001796 5.3e-08 60.8 47 59.6
Prupe.1G427000 Prunus persica HOM05D000702 ORTHO05D001796 5.3e-08 60.8 46 60.9
Hund24090 Selenicereus undatus HOM05D000702 ORTHO05D001796 5.3e-08 60.8 45 60.0
THA.LOC104812583 Tarenaya hassleriana HOM05D000702 ORTHO05D001796 5.3e-08 60.8 46 60.9
TWI09G1041 Tripterygium wilfordii HOM05D000702 ORTHO05D001796 5.3e-08 60.8 47 63.8
GSVIVG01009387001 Vitis vinifera HOM05D000702 ORTHO05D001796 5.3e-08 60.8 46 60.9
Glyma.04G044000 Glycine max HOM05D000702 ORTHO05D001796 7.0e-08 60.5 47 59.6
RcHm_v2.0_Chr6g0309081 Rosa chinensis HOM05D000702 ORTHO05D001796 7.0e-08 60.5 45 60.0
PGSC0003DMG400021539 Solanum tuberosum HOM05D000702 ORTHO05D001796 7.0e-08 60.5 46 58.7
VMungo1309G0749 Vigna mungo HOM05D000702 ORTHO05D001796 7.0e-08 60.5 47 59.6
BcaB04g17543 Brassica carinata HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
BcaC07g37232 Brassica carinata HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
BcaC08g42933 Brassica carinata HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
A08p05880 Brassica napus HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
A10p06560 Brassica napus HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
C06p01730 Brassica napus HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
C08p06530 Brassica napus HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
BolC6t35301H Brassica oleracea HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
BraA08t32590Z Brassica rapa HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
BraA10t42917Z Brassica rapa HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
CSS0044220 Camellia sinensis var. sinensis HOM05D000702 ORTHO05D001796 9.1e-08 60.1 45 62.2
Ciclev10000826m.g Citrus clementina HOM05D000702 ORTHO05D001796 9.1e-08 60.1 47 61.7
Nitab4.5_0003564g0060 Nicotiana tabacum HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 60.9
TWI36G0259 Tripterygium wilfordii HOM05D000702 ORTHO05D001796 9.1e-08 60.1 46 63.0
Actinidia10176 Actinidia chinensis HOM05D000702 ORTHO05D001796 1.2e-07 59.7 46 65.2
FvH4_2g33450 Fragaria vesca HOM05D000702 ORTHO05D001796 1.2e-07 59.7 45 60.0
FAN24G3163 Fragaria x ananassa HOM05D000702 ORTHO05D001796 1.2e-07 59.7 45 60.0
FAN27G0164 Fragaria x ananassa HOM05D000702 ORTHO05D001796 1.2e-07 59.7 45 60.0
PGR083G2589 Punica granatum HOM05D000702 ORTHO05D001796 1.2e-07 59.7 56 55.4
Glyma.06G044200 Glycine max HOM05D000702 ORTHO05D001796 1.6e-07 59.3 47 57.4
BcaB07g33851 Brassica carinata HOM05D000702 ORTHO05D001796 2.0e-07 58.9 46 63.0
AUR62038780 Chenopodium quinoa HOM05D000702 ORTHO05D001796 2.0e-07 58.9 47 59.6
VMungo0331G1628 Vigna mungo HOM05D000702 ORTHO05D001796 2.0e-07 58.9 46 56.5
AT1G47240 Arabidopsis thaliana HOM05D000702 ORTHO05D001796 2.7e-07 58.5 46 60.9
BolC8t47499H Brassica oleracea HOM05D000702 ORTHO05D001796 2.7e-07 58.5 46 60.9
COL.COLO4_28553 Corchorus olitorius HOM05D000702 ORTHO05D001796 2.7e-07 58.5 47 59.6
FAN20G2703 Fragaria x ananassa HOM05D000702 ORTHO05D001796 2.7e-07 58.5 45 60.0
PGR031G0382 Punica granatum HOM05D000702 ORTHO05D001796 2.7e-07 58.5 45 62.2
PGR031G3938 Punica granatum HOM05D000702 ORTHO05D001796 2.7e-07 58.5 47 59.6
AUR62024545 Chenopodium quinoa HOM05D000702 ORTHO05D001796 3.5e-07 58.2 47 59.6
Sp1g34360 Schrenkiella parvula HOM05D000702 ORTHO05D001796 3.5e-07 58.2 46 60.9
SGA_v2.0_scaffold259G45809 Striga asiatica HOM05D000702 ORTHO05D001796 3.5e-07 58.2 62 50.0
GSVIVG01000173001 Vitis vinifera HOM05D000702 ORTHO05D001796 3.5e-07 58.2 50 58.0
AL1G53380 Arabidopsis lyrata HOM05D000702 ORTHO05D001796 4.5e-07 57.8 46 58.7
Carub.0001s3601 Capsella rubella HOM05D000702 ORTHO05D001796 4.5e-07 57.8 46 60.9
Migut.N02760 Erythranthe guttata HOM05D000702 ORTHO05D001796 4.5e-07 57.8 50 60.0
Peaxi162Scf00081g00618 Petunia axillaris HOM05D000702 ORTHO05D001796 4.5e-07 57.8 45 57.8
QL02p002596 Quercus lobata HOM05D000702 ORTHO05D001796 4.5e-07 57.8 46 60.9
Rhsim08G0096700 Rhododendron simsii HOM05D000702 ORTHO05D001796 4.5e-07 57.8 56 55.4
Sopen04g031850 Solanum pennellii HOM05D000702 ORTHO05D001796 4.5e-07 57.8 46 56.5
FAN15G1111 Fragaria x ananassa HOM05D000702 ORTHO05D001796 5.9e-07 57.4 45 57.8
MD08G1089600 Malus domestica HOM05D000702 ORTHO05D001796 5.9e-07 57.4 47 55.3
SalBow8G2694 Salvia bowleyana HOM05D000702 ORTHO05D001796 5.9e-07 57.4 45 64.4
CiPaw.02G005200 Carya illinoinensis HOM05D000702 ORTHO05D001796 7.7e-07 57.0 50 58.0
MD15G1074200 Malus domestica HOM05D000702 ORTHO05D001796 7.7e-07 57.0 47 55.3
unitig_578.g16134 Utricularia gibba HOM05D000702 ORTHO05D001796 7.7e-07 57.0 46 63.0
Actinidia32814 Actinidia chinensis HOM05D000702 ORTHO05D001796 1.0e-06 56.6 59 54.2
Manes.05G179600 Manihot esculenta HOM05D000702 ORTHO05D001796 1.0e-06 56.6 47 57.4
Potri.002G121000 Populus trichocarpa HOM05D000702 ORTHO05D001796 1.0e-06 56.6 47 55.3
arahy.Tifrunner.gnm1.ann1.79RMIA Arachis hypogaea HOM05D000702 ORTHO05D001796 1.3e-06 56.2 45 57.8
arahy.Tifrunner.gnm1.ann1.RY8NQV Arachis hypogaea HOM05D000702 ORTHO05D001796 1.3e-06 56.2 45 57.8
CARHR036780 Cardamine hirsuta HOM05D000702 ORTHO05D001796 1.3e-06 56.2 46 56.5
CiPaw.01G009000 Carya illinoinensis HOM05D000702 ORTHO05D001796 1.3e-06 56.2 47 61.7
Glyma.01G190700 Glycine max HOM05D000702 ORTHO05D001796 1.3e-06 56.2 47 61.7
SalBow6G0852 Salvia bowleyana HOM05D000702 ORTHO05D001796 1.3e-06 56.2 45 62.2
Hund16372 Selenicereus undatus HOM05D000702 ORTHO05D001796 1.3e-06 56.2 45 66.7
THA.LOC104806165 Tarenaya hassleriana HOM05D000702 ORTHO05D001796 1.3e-06 56.2 48 54.2
ECA247G3156 Erigeron canadensis HOM05D000702 ORTHO05D001796 1.7e-06 55.8 47 55.3
Lsat_1_v5_gn_1_23561 Lactuca sativa HOM05D000702 ORTHO05D001796 1.7e-06 55.8 66 48.5
arahy.Tifrunner.gnm1.ann1.K0A0HQ Arachis hypogaea HOM05D000702 ORTHO05D001796 2.2e-06 55.5 47 59.6
arahy.Tifrunner.gnm1.ann1.VHC3ET Arachis hypogaea HOM05D000702 ORTHO05D001796 2.2e-06 55.5 47 59.6
Lj4C67T6 Lonicera japonica HOM05D000702 ORTHO05D001796 2.2e-06 55.5 46 58.7
Lalb_Chr04g0254571 Lupinus albus HOM05D000702 ORTHO05D001796 2.2e-06 55.5 45 53.3
Eucgr.F00133 Eucalyptus grandis HOM05D000702 ORTHO05D001796 2.9e-06 55.1 46 60.9
Eucgr.F02273 Eucalyptus grandis HOM05D000702 ORTHO05D001796 2.9e-06 55.1 45 51.1
FAN23G1806 Fragaria x ananassa HOM05D000702 ORTHO05D001796 2.9e-06 55.1 47 57.4
FAN28G0892 Fragaria x ananassa HOM05D000702 ORTHO05D001796 2.9e-06 55.1 47 57.4
Phvul.002G014300 Phaseolus vulgaris HOM05D000702 ORTHO05D001796 2.9e-06 55.1 47 57.4
Prupe.6G225900 Prunus persica HOM05D000702 ORTHO05D001796 2.9e-06 55.1 47 55.3
Rhsim06G0058700 Rhododendron simsii HOM05D000702 ORTHO05D001796 2.9e-06 55.1 46 56.5
Ah.05g167160 Amaranthus hybridus HOM05D000702 ORTHO05D001796 3.8e-06 54.7 45 57.8
CSS0021034 Camellia sinensis var. sinensis HOM05D000702 ORTHO05D001796 3.8e-06 54.7 59 49.2
arahy.Tifrunner.gnm1.ann1.25DMGV Arachis hypogaea HOM05D000702 ORTHO05D001796 5.0e-06 54.3 47 59.6
Glyma.16G027800 Glycine max HOM05D000702 ORTHO05D001796 5.0e-06 54.3 46 52.2
SGA_v2.0_scaffold14G06949 Striga asiatica HOM05D000702 ORTHO05D001796 5.0e-06 54.3 41 65.9
FAN19G2199 Fragaria x ananassa HOM05D000702 ORTHO05D001796 6.5e-06 53.9 47 57.4
Manes.12G109500 Manihot esculenta HOM05D000702 ORTHO05D001796 6.5e-06 53.9 47 55.3
QL02p002551 Quercus lobata HOM05D000702 ORTHO05D001796 6.5e-06 53.9 46 56.5
TPR.G30461 Trifolium pratense HOM05D000702 ORTHO05D001796 6.5e-06 53.9 45 57.8
Ah.03g146200 Amaranthus hybridus HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 62.2
MSTRG.1046 Avicennia marina HOM05D000702 ORTHO05D001796 8.5e-06 53.5 67 43.3
FvH4_1g17000 Fragaria vesca HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 57.8
FAN23G1771 Fragaria x ananassa HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 57.8
FAN26G1805 Fragaria x ananassa HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 57.8
Lj2g0026146 Lotus japonicus HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 60.0
Medtr5g016270 Medicago truncatula HOM05D000702 ORTHO05D001796 8.5e-06 53.5 46 60.9
Phvul.003G238600 Phaseolus vulgaris HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 64.4
TPR.G23885 Trifolium pratense HOM05D000702 ORTHO05D001796 8.5e-06 53.5 45 55.6
unitig_21.g20636 Utricularia gibba HOM05D000702 ORTHO05D001796 8.5e-06 53.5 61 52.5

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (7 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (9 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (3 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (3 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (3 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (3 genes)
Quercus lobata (2 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (0 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings