Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g071730.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 5.3e-168 594.3 318 100.0
Sopen04g027710 Solanum pennellii HOM05D004764 ORTHO05D005580 2.2e-166 589.0 318 98.7
PGSC0003DMG400006372 Solanum tuberosum HOM05D004764 ORTHO05D005580 1.2e-164 583.2 318 97.8
Sopen03g006610 Solanum pennellii HOM05D004764 ORTHO05D005580 2.5e-157 558.9 318 95.0
CAN.G308.66 Capsicum annuum HOM05D004764 ORTHO05D005580 4.0e-155 551.6 318 93.4
Nitab4.5_0012769g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 9.8e-154 547.0 318 91.8
CAN.G2159.1 Capsicum annuum HOM05D004764 ORTHO05D005580 1.3e-153 546.6 318 92.5
Nitab4.5_0000344g0160 Nicotiana tabacum HOM05D004764 ORTHO05D005580 1.4e-152 543.1 318 91.5
Peaxi162Scf00064g00126 Petunia axillaris HOM05D004764 ORTHO05D005580 1.7e-142 509.6 318 87.7
Peaxi162Scf00010g01114 Petunia axillaris HOM05D004764 ORTHO05D005580 1.5e-141 506.5 318 87.4
Solyc03g033850.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 2.3e-134 482.6 281 92.5
Migut.F01566 Erythranthe guttata HOM05D004764 ORTHO05D005580 2.5e-133 479.2 319 79.3
vmacro01597 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 5.2e-131 471.5 319 79.0
MSTRG.8305 Avicennia marina HOM05D004764 ORTHO05D005580 6.8e-131 471.1 318 78.0
Cc02_g20660 Coffea canephora HOM05D004764 ORTHO05D005580 9.8e-130 467.2 318 77.4
Dinv20933 Davidia involucrata HOM05D004764 ORTHO05D005580 1.3e-129 466.8 318 76.7
Dinv21011 Davidia involucrata HOM05D004764 ORTHO05D005580 1.3e-129 466.8 318 76.7
CSS0016003 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 1.7e-129 466.5 319 78.1
Lj1A432T27 Lonicera japonica HOM05D004764 ORTHO05D005580 2.2e-129 466.1 318 77.7
CSS0010099 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 6.4e-129 464.5 319 77.7
Lj1C949T1 Lonicera japonica HOM05D004764 ORTHO05D005580 5.4e-128 461.5 318 77.7
SGA_v2.0_scaffold130G34221 Striga asiatica HOM05D004764 ORTHO05D005580 9.2e-128 460.7 318 76.4
SalBow6G7043 Salvia bowleyana HOM05D004764 ORTHO05D005580 4.6e-127 458.4 318 76.1
QL07p043722 Quercus lobata HOM05D004764 ORTHO05D005580 8.6e-126 454.1 318 76.1
GSVIVG01016388001 Vitis vinifera HOM05D004764 ORTHO05D005580 8.6e-126 454.1 319 75.5
Ciclev10032191m.g Citrus clementina HOM05D004764 ORTHO05D005580 1.9e-125 453.0 318 76.1
Potri.010G194300 Populus trichocarpa HOM05D004764 ORTHO05D005580 4.3e-125 451.8 318 75.2
TWI73G0601 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 9.5e-125 450.7 319 75.2
CANSAT21G1253 Cannabis sativa HOM05D004764 ORTHO05D005580 1.6e-124 449.9 318 75.5
Manes.10G019100 Manihot esculenta HOM05D004764 ORTHO05D005580 2.1e-124 449.5 319 75.2
Rhsim09G0171300 Rhododendron simsii HOM05D004764 ORTHO05D005580 2.8e-124 449.1 363 69.1
Cpa.g.sc19.234 Carica papaya HOM05D004764 ORTHO05D005580 3.6e-124 448.7 319 76.2
HanXRQChr12g0369401 Helianthus annuus HOM05D004764 ORTHO05D005580 3.6e-124 448.7 318 74.2
TWI09G1390 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 1.4e-123 446.8 319 74.9
MD02G1196300 Malus domestica HOM05D004764 ORTHO05D005580 3.1e-123 445.7 319 74.9
Ciclev10016032m.g Citrus clementina HOM05D004764 ORTHO05D005580 6.8e-123 444.5 318 74.5
DCAR_011775 Daucus carota HOM05D004764 ORTHO05D005580 8.9e-123 444.1 318 73.6
COL.COLO4_25609 Corchorus olitorius HOM05D004764 ORTHO05D005580 1.2e-122 443.7 318 75.2
Prupe.2G152400 Prunus persica HOM05D004764 ORTHO05D005580 2.0e-122 443.0 319 73.7
Duzib106G0320 Durio zibethinus HOM05D004764 ORTHO05D005580 3.4e-122 442.2 319 74.9
Cfa017589 Carpinus fangiana HOM05D004764 ORTHO05D005580 5.8e-122 441.4 318 73.0
THA.LOC104816565 Tarenaya hassleriana HOM05D004764 ORTHO05D005580 5.8e-122 441.4 318 74.5
CiPaw.10G131000 Carya illinoinensis HOM05D004764 ORTHO05D005580 1.3e-121 440.3 318 73.0
Ca_25497_v3 Cicer arietinum L. HOM05D004764 ORTHO05D005580 1.3e-121 440.3 319 73.7
Lj2g0017902 Lotus japonicus HOM05D004764 ORTHO05D005580 1.7e-121 439.9 319 74.3
MD07G1124900 Malus domestica HOM05D004764 ORTHO05D005580 1.7e-121 439.9 319 73.7
Medtr6g084580 Medicago truncatula HOM05D004764 ORTHO05D005580 2.2e-121 439.5 319 74.3
VMungo0464G2049 Vigna mungo HOM05D004764 ORTHO05D005580 3.7e-121 438.7 319 73.4
ECA233G3311 Erigeron canadensis HOM05D004764 ORTHO05D005580 1.4e-120 436.8 319 73.0
Atru.chr12.285 Acer truncatum HOM05D004764 ORTHO05D005580 2.4e-120 436.0 318 72.6
Atru.chr12.324 Acer truncatum HOM05D004764 ORTHO05D005580 3.2e-120 435.6 318 72.3
Psat1g037840 Pisum sativum HOM05D004764 ORTHO05D005580 4.1e-120 435.3 319 73.4
Hund16007 Selenicereus undatus HOM05D004764 ORTHO05D005580 4.1e-120 435.3 319 72.7
Thecc.10G137500 Theobroma cacao HOM05D004764 ORTHO05D005580 5.4e-120 434.9 318 74.2
Gorai.011G278800 Gossypium raimondii HOM05D004764 ORTHO05D005580 7.1e-120 434.5 318 73.3
Phvul.004G157700 Phaseolus vulgaris HOM05D004764 ORTHO05D005580 9.2e-120 434.1 318 72.3
Gohir.A10G228400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 1.2e-119 433.7 318 73.0
TAR623G1788 Trochodendron aralioides HOM05D004764 ORTHO05D005580 1.2e-119 433.7 319 73.4
TAR369G1012 Trochodendron aralioides HOM05D004764 ORTHO05D005580 1.6e-119 433.3 319 73.4
Glyma.09G184900 Glycine max HOM05D004764 ORTHO05D005580 2.7e-119 432.6 318 72.6
MELO3C008270.2 Cucumis melo HOM05D004764 ORTHO05D005580 6.0e-119 431.4 319 73.0
Aa31LG10G3070 Aethionema arabicum HOM05D004764 ORTHO05D005580 1.3e-118 430.3 318 71.7
EL10Ac2g04766 Beta vulgaris HOM05D004764 ORTHO05D005580 2.3e-118 429.5 318 73.3
Lj1g0004796 Lotus japonicus HOM05D004764 ORTHO05D005580 3.9e-118 428.7 318 72.0
Lalb_Chr14g0371191 Lupinus albus HOM05D004764 ORTHO05D005580 3.9e-118 428.7 318 74.2
Sed0006926 Sechium edule HOM05D004764 ORTHO05D005580 6.6e-118 427.9 320 72.5
PGR142G0534 Punica granatum HOM05D004764 ORTHO05D005580 8.6e-118 427.6 319 72.7
Lalb_Chr22g0353041 Lupinus albus HOM05D004764 ORTHO05D005580 1.5e-117 426.8 318 73.3
AL1G59680 Arabidopsis lyrata HOM05D004764 ORTHO05D005580 2.5e-117 426.0 320 71.6
Sp1g38390 Schrenkiella parvula HOM05D004764 ORTHO05D005580 1.2e-116 423.7 318 70.4
CARHR041910 Cardamine hirsuta HOM05D004764 ORTHO05D005580 1.6e-116 423.3 318 70.4
Lsat_1_v5_gn_8_14200 Lactuca sativa HOM05D004764 ORTHO05D005580 2.1e-116 422.9 315 70.5
ClCG11G006420 Citrullus lanatus HOM05D004764 ORTHO05D005580 2.8e-116 422.5 320 71.9
arahy.Tifrunner.gnm1.ann1.BR1H5V Arachis hypogaea HOM05D004764 ORTHO05D005580 6.2e-116 421.4 319 71.5
Thhalv10011542m.g Eutrema salsugineum HOM05D004764 ORTHO05D005580 1.8e-115 419.9 318 70.4
RcHm_v2.0_Chr1g0351821 Rosa chinensis HOM05D004764 ORTHO05D005580 1.8e-115 419.9 318 70.8
FAN10G3109 Fragaria x ananassa HOM05D004764 ORTHO05D005580 8.9e-115 417.5 319 70.2
Ah.16g104720 Amaranthus hybridus HOM05D004764 ORTHO05D005580 1.2e-114 417.2 318 70.4
Carub.0001s4061 Capsella rubella HOM05D004764 ORTHO05D005580 1.5e-114 416.8 320 70.0
AT1G51740 Arabidopsis thaliana HOM05D004764 ORTHO05D005580 2.0e-114 416.4 319 70.5
FvH4_7g12790 Fragaria vesca HOM05D004764 ORTHO05D005580 2.0e-114 416.4 319 69.9
Aqoxy7G01280 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 1.3e-113 413.7 318 70.8
FAN10G1216 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.3e-113 413.7 318 69.5
Eucgr.G03020 Eucalyptus grandis HOM05D004764 ORTHO05D005580 1.7e-113 413.3 318 72.0
Aqoxy1G00756 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 2.2e-113 412.9 318 69.8
BcaB02g11053 Brassica carinata HOM05D004764 ORTHO05D005580 6.4e-113 411.4 321 68.5
Ah.02g115950 Amaranthus hybridus HOM05D004764 ORTHO05D005580 1.2e-111 407.1 318 68.2
arahy.Tifrunner.gnm1.ann1.V0Z2W7 Arachis hypogaea HOM05D004764 ORTHO05D005580 3.0e-110 402.5 318 68.6
FAN01G0026 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.5e-109 400.2 354 62.7
Os04g0530400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 1.2e-108 397.1 320 67.8
Os12g0154400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 1.6e-108 396.7 320 67.5
Zm00001eb429110 Zea mays HOM05D004764 ORTHO05D005580 2.1e-108 396.4 319 66.8
Actinidia00927 Actinidia chinensis HOM05D004764 ORTHO05D005580 2.8e-108 396.0 319 69.0
A06p02240 Brassica napus HOM05D004764 ORTHO05D005580 3.6e-108 395.6 302 70.2
unitig_0.g2163 Utricularia gibba HOM05D004764 ORTHO05D005580 3.6e-108 395.6 321 67.0
BraA06t23434Z Brassica rapa HOM05D004764 ORTHO05D005580 6.2e-108 394.8 302 69.9
BolC6t35797H Brassica oleracea HOM05D004764 ORTHO05D005580 8.1e-108 394.4 302 69.5
Lsat_1_v5_gn_9_12660 Lactuca sativa HOM05D004764 ORTHO05D005580 1.4e-107 393.7 317 65.0
CsaV3_6G001590 Cucumis sativus L. HOM05D004764 ORTHO05D005580 1.8e-107 393.3 294 72.8
PSO585G0029 Papaver somniferum HOM05D004764 ORTHO05D005580 1.8e-107 393.3 319 66.1
PSO384G2817 Papaver somniferum HOM05D004764 ORTHO05D005580 5.2e-107 391.7 318 67.0
BcaB07g33630 Brassica carinata HOM05D004764 ORTHO05D005580 9.0e-107 391.0 305 68.9
Gohir.D10G242400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 9.0e-107 391.0 286 74.1
Oeu013001.1 Olea europaea HOM05D004764 ORTHO05D005580 2.6e-106 389.4 280 75.4
Nitab4.5_0011923g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 1.7e-102 376.7 318 68.2
ATR0736G027 Amborella trichopoda HOM05D004764 ORTHO05D005580 3.0e-102 375.9 320 63.8
BcaC08g43344 Brassica carinata HOM05D004764 ORTHO05D005580 3.9e-102 375.6 294 68.4
C06p07040 Brassica napus HOM05D004764 ORTHO05D005580 6.6e-102 374.8 294 67.7
Sabra10G0149400 Salix brachista HOM05D004764 ORTHO05D005580 1.8e-99 366.7 288 67.7
Lj1C433T7 Lonicera japonica HOM05D004764 ORTHO05D005580 4.0e-99 365.5 256 74.2
Haze_20561 Corylus avellana HOM05D004764 ORTHO05D005580 1.2e-98 364.0 270 70.7
Sc11g0007530 Simmondsia chinensis HOM05D004764 ORTHO05D005580 1.7e-97 360.1 270 69.3
Nitab4.5_0002828g0150 Nicotiana tabacum HOM05D004764 ORTHO05D005580 2.9e-97 359.4 391 59.6
SHI03532 Sapria himalayana HOM05D004764 ORTHO05D005580 6.0e-95 351.7 319 61.8
FAN06G0806 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.0e-94 350.9 265 71.7
AUR62041843 Chenopodium quinoa HOM05D004764 ORTHO05D005580 3.9e-94 349.0 318 61.9
Glyma.07G091000 Glycine max HOM05D004764 ORTHO05D005580 6.7e-94 348.2 318 64.2
SEGI_31890 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 9.6e-93 344.4 320 59.1
Nn5g27977 Nelumbo nucifera HOM05D004764 ORTHO05D005580 1.1e-91 340.9 318 64.2
AUR62032348 Chenopodium quinoa HOM05D004764 ORTHO05D005580 7.6e-90 334.7 271 64.9
Lj1C435T9 Lonicera japonica HOM05D004764 ORTHO05D005580 3.2e-88 329.3 242 70.7
vmacro10073 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 2.1e-84 316.6 231 74.9
HPP92_027811 Vanilla planifolia HOM05D004764 ORTHO05D005580 5.3e-83 312.0 318 55.3
Potri.008G063100 Populus trichocarpa HOM05D004764 ORTHO05D005580 2.8e-76 289.7 228 66.2
TPR.G27934 Trifolium pratense HOM05D004764 ORTHO05D005580 6.7e-70 268.5 749 31.5
Mapoly0024s0083 Marchantia polymorpha HOM05D004764 ORTHO05D005580 1.5e-69 267.3 327 48.9
SMO356G0668 Selaginella moellendorffii HOM05D004764 ORTHO05D005580 3.4e-66 256.1 314 49.4
Pp3c6_24680 Physcomitrium patens HOM05D004764 ORTHO05D005580 1.2e-63 247.7 322 44.1
Oeu032670.1 Olea europaea HOM05D004764 ORTHO05D005580 3.7e-60 236.1 181 77.3
AagrBONN_evm.TU.Sc2ySwM_368.928 Anthoceros agrestis HOM05D004764 ORTHO05D005580 1.0e-57 228.0 295 47.1
CDE09G0086 Ceratophyllum demersum HOM05D004764 ORTHO05D005580 2.8e-52 209.9 192 64.6
PGSC0003DMG400022548 Solanum tuberosum HOM05D004764 ORTHO05D005580 1.8e-51 207.2 125 93.6
Zm00001eb427200 Zea mays HOM05D004764 ORTHO05D005580 2.2e-49 200.3 160 72.5
Actinidia27825 Actinidia chinensis HOM05D004764 ORTHO05D005580 2.1e-47 193.7 150 73.3
C06p13300 Brassica napus HOM05D001194 ORTHO05D005580 2.0e-45 187.2 274 47.4
Glyma.17G199500 Glycine max HOM05D004764 ORTHO05D005580 5.5e-40 169.1 109 87.2
PSO339G3467 Papaver somniferum HOM05D004764 ORTHO05D005580 2.8e-36 156.8 151 60.9
HPP92_004405 Vanilla planifolia HOM05D004764 ORTHO05D005580 8.3e-36 155.2 121 62.8
Sabra08G0046500 Salix brachista HOM05D004764 ORTHO05D005580 1.1e-35 154.8 252 40.5
BolC6t36490H Brassica oleracea HOM05D001194 ORTHO05D000015 6.6e-33 145.6 275 40.7
MCO05G144 Micromonas commoda HOM05D004764 ORTHO05D005580 1.9e-32 144.1 313 33.9
vmacro10074 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.4e-30 137.9 112 66.1
Eucgr.L03566 Eucalyptus grandis HOM05D004764 ORTHO05D005580 9.8e-29 131.7 91 71.4
CBR_g29687 Chara braunii HOM05D004764 ORTHO05D005580 2.3e-25 120.6 93 69.9
BcaC08g43937 Brassica carinata HOM05D001194 ORTHO05D004786 2.9e-25 120.2 135 56.3
BcaC08g43936 Brassica carinata HOM05D004764 ORTHO05D005580 1.1e-24 118.2 99 61.6
vmacro10891 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 9.5e-24 115.2 128 59.4
SEGI_41058 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 1.2e-21 108.2 89 59.6
Actinidia13909 Actinidia chinensis HOM05D004764 ORTHO05D005580 4.4e-21 106.3 111 58.6
Cre17.g711450 Chlamydomonas reinhardtii HOM05D004764 ORTHO05D005580 1.1e-16 91.7 397 27.0
Actinidia13908 Actinidia chinensis HOM05D004764 ORTHO05D005580 1.5e-16 91.3 67 65.7
Ah.16g102910 Amaranthus hybridus HOM05D004764 ORTHO05D005580 4.0e-14 83.2 57 75.4
Sc11g0007520 Simmondsia chinensis HOM05D004764 ORTHO05D005580 1.1e-08 65.1 92 45.7
PRCOL_00004763 Prasinoderma coloniale HOM05D001748 ORTHO05D001759 2.5e-08 63.9 126 34.9
BraA05t20843Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-06 58.2 42 61.9
HanXRQChr16g0528961 Helianthus annuus HOM05D004764 ORTHO05D005580 1.8e-06 57.8 90 41.1

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (4 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings