Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g064720.3 Solanum lycopersicum HOM05D005356 ORTHO05D006596 1.2e-233 812.8 409 100.0
Sopen04g026680 Solanum pennellii HOM05D005356 ORTHO05D006596 3.6e-233 811.2 409 99.8
PGSC0003DMG400024812 Solanum tuberosum HOM05D005356 ORTHO05D006596 5.0e-227 790.8 409 97.6
CAN.G2009.1 Capsicum annuum HOM05D005356 ORTHO05D006596 4.5e-220 767.7 409 93.9
Peaxi162Scf00263g00323 Petunia axillaris HOM05D005356 ORTHO05D006596 1.0e-216 756.5 409 91.7
Nitab4.5_0002990g0020 Nicotiana tabacum HOM05D005356 ORTHO05D006596 1.5e-215 752.7 409 92.4
Nitab4.5_0000299g0040 Nicotiana tabacum HOM05D005356 ORTHO05D006596 2.0e-215 752.3 409 93.2
Cc10_g12920 Coffea canephora HOM05D005356 ORTHO05D006596 2.4e-157 559.3 414 67.9
Sopen04g026690 Solanum pennellii HOM05D005356 ORTHO05D006596 4.6e-156 555.1 287 98.6
TAR375G1012 Trochodendron aralioides HOM05D005356 ORTHO05D006596 2.1e-153 546.2 407 67.1
Manes.08G159200 Manihot esculenta HOM05D005356 ORTHO05D006596 2.6e-151 539.3 345 74.8
TAR629G3426 Trochodendron aralioides HOM05D005356 ORTHO05D006596 2.5e-149 532.7 412 66.0
Migut.C01041 Erythranthe guttata HOM05D005356 ORTHO05D006596 4.2e-149 531.9 408 64.7
Thecc.05G227000 Theobroma cacao HOM05D005356 ORTHO05D006596 5.5e-149 531.6 379 68.9
Dinv17238 Davidia involucrata HOM05D005356 ORTHO05D006596 2.7e-148 529.3 419 65.4
GSVIVG01024263001 Vitis vinifera HOM05D005356 ORTHO05D006596 1.1e-146 523.9 346 73.1
Atru.chr12.1818 Acer truncatum HOM05D005356 ORTHO05D006596 1.5e-146 523.5 346 72.8
Oeu030531.2 Olea europaea HOM05D005356 ORTHO05D006596 2.5e-146 522.7 413 64.6
Nn1g09227 Nelumbo nucifera HOM05D005356 ORTHO05D006596 3.3e-146 522.3 386 68.1
CiPaw.05G210900 Carya illinoinensis HOM05D005356 ORTHO05D006596 3.7e-145 518.8 393 66.2
Ciclev10031697m.g Citrus clementina HOM05D005356 ORTHO05D006596 1.8e-144 516.5 398 65.8
Potri.013G076100 Populus trichocarpa HOM05D005356 ORTHO05D006596 1.8e-144 516.5 414 63.3
FvH4_7g34281 Fragaria vesca HOM05D005356 ORTHO05D006596 4.0e-144 515.4 346 70.8
Prupe.2G329800 Prunus persica HOM05D005356 ORTHO05D006596 2.6e-143 512.7 346 71.1
Sabra13G0065300 Salix brachista HOM05D005356 ORTHO05D006596 2.6e-143 512.7 410 62.9
Gorai.007G246900 Gossypium raimondii HOM05D005356 ORTHO05D006596 4.5e-143 511.9 385 64.7
COL.COLO4_32921 Corchorus olitorius HOM05D005356 ORTHO05D006596 5.8e-143 511.5 382 65.7
Gohir.A11G226000 Gossypium hirsutum HOM05D005356 ORTHO05D006596 5.8e-143 511.5 383 64.5
DCAR_009031 Daucus carota HOM05D005356 ORTHO05D006596 7.6e-143 511.1 363 69.1
Gohir.D11G234600 Gossypium hirsutum HOM05D005356 ORTHO05D006596 1.0e-142 510.8 385 64.7
MSTRG.24194 Avicennia marina HOM05D005356 ORTHO05D006596 2.9e-142 509.2 411 62.5
Gorai.004G255200 Gossypium raimondii HOM05D005356 ORTHO05D006596 3.8e-142 508.8 375 66.7
RcHm_v2.0_Chr1g0384641 Rosa chinensis HOM05D005356 ORTHO05D006596 3.8e-142 508.8 353 69.4
Lsat_1_v5_gn_9_47941 Lactuca sativa HOM05D005356 ORTHO05D006596 1.1e-141 507.3 378 66.7
Migut.N03237 Erythranthe guttata HOM05D005356 ORTHO05D006596 2.5e-141 506.1 413 63.7
Sed0019262 Sechium edule HOM05D005356 ORTHO05D006596 2.5e-141 506.1 346 69.9
PSO782G1515 Papaver somniferum HOM05D005356 ORTHO05D006596 3.2e-141 505.8 416 62.7
CiPaw.06G037000 Carya illinoinensis HOM05D005356 ORTHO05D006596 5.5e-141 505.0 341 71.3
SalBow6G3313 Salvia bowleyana HOM05D005356 ORTHO05D006596 5.5e-141 505.0 408 62.3
Sed0017544 Sechium edule HOM05D005356 ORTHO05D006596 5.5e-141 505.0 346 69.9
Hund11857 Selenicereus undatus HOM05D005356 ORTHO05D006596 7.1e-141 504.6 356 68.3
ECA232G1465 Erigeron canadensis HOM05D005356 ORTHO05D006596 1.6e-140 503.4 345 69.6
SalBow7G2700 Salvia bowleyana HOM05D005356 ORTHO05D006596 1.6e-140 503.4 414 63.3
Nn3g19190 Nelumbo nucifera HOM05D005356 ORTHO05D006596 2.7e-140 502.7 416 61.8
Gohir.A08G221634 Gossypium hirsutum HOM05D005356 ORTHO05D006596 6.1e-140 501.5 347 68.6
MD07G1311300 Malus domestica HOM05D005356 ORTHO05D006596 6.1e-140 501.5 345 70.1
Oeu015013.2 Olea europaea HOM05D005356 ORTHO05D006596 1.0e-139 500.7 487 55.2
CsaV3_2G035860 Cucumis sativus L. HOM05D005356 ORTHO05D006596 3.0e-139 499.2 346 68.2
Aqoxy3G04210 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 3.9e-139 498.8 399 62.4
MELO3C024754.2 Cucumis melo HOM05D005356 ORTHO05D006596 2.5e-138 496.1 346 68.2
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 2.5e-138 496.1 410 63.4
HanXRQChr05g0139001 Helianthus annuus HOM05D005356 ORTHO05D006596 9.7e-138 494.2 346 69.7
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea HOM05D005356 ORTHO05D006596 1.6e-137 493.4 342 69.3
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 2.2e-137 493.0 336 72.0
Sabra19G0053800 Salix brachista HOM05D005356 ORTHO05D006596 2.2e-137 493.0 430 58.6
Lj3g0010653 Lotus japonicus HOM05D005356 ORTHO05D006596 3.7e-137 492.3 340 67.9
Medtr0172s0020 Medicago truncatula HOM05D005356 ORTHO05D006596 6.3e-137 491.5 386 63.2
THA.LOC104820830 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 8.2e-137 491.1 353 65.2
Eucgr.A02993 Eucalyptus grandis HOM05D005356 ORTHO05D006596 1.1e-136 490.7 387 63.8
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea HOM05D005356 ORTHO05D006596 1.4e-136 490.3 342 69.0
Aqoxy1G01762 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 1.8e-136 490.0 339 69.9
AUR62002252 Chenopodium quinoa HOM05D005356 ORTHO05D006596 5.3e-136 488.4 347 68.0
ATR0369G003 Amborella trichopoda HOM05D005356 ORTHO05D006596 1.0e-134 484.2 319 71.5
CANSAT21G1742 Cannabis sativa HOM05D005356 ORTHO05D006596 1.0e-134 484.2 341 69.5
Phvul.011G016500 Phaseolus vulgaris HOM05D005356 ORTHO05D006596 2.9e-134 482.6 395 62.0
EL10Ac3g05893 Beta vulgaris HOM05D005356 ORTHO05D006596 3.8e-134 482.3 348 66.1
TPR.G9827 Trifolium pratense HOM05D005356 ORTHO05D006596 3.2e-133 479.2 364 64.8
Glyma.12G013400 Glycine max HOM05D005356 ORTHO05D006596 9.4e-133 477.6 342 67.5
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 6.1e-132 474.9 410 58.8
Lalb_Chr01g0000721 Lupinus albus HOM05D005356 ORTHO05D006596 3.0e-131 472.6 388 60.6
Psat0s2502g0200 Pisum sativum HOM05D005356 ORTHO05D006596 3.0e-131 472.6 341 65.1
Sp6g26700 Schrenkiella parvula HOM05D005356 ORTHO05D006596 3.9e-131 472.2 344 65.1
THA.LOC104802905 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 3.9e-131 472.2 355 64.8
Aa31LG11G12150 Aethionema arabicum HOM05D005356 ORTHO05D006596 6.7e-131 471.5 353 64.3
BraA10t44246Z Brassica rapa HOM05D005356 ORTHO05D006596 2.5e-130 469.5 346 65.3
PGR119G0933 Punica granatum HOM05D005356 ORTHO05D006596 3.3e-130 469.2 347 66.6
PGR008G0003 Punica granatum HOM05D005356 ORTHO05D006596 9.7e-130 467.6 347 66.3
PGR131G0008 Punica granatum HOM05D005356 ORTHO05D006596 9.7e-130 467.6 347 66.3
BcaC03g13524 Brassica carinata HOM05D005356 ORTHO05D006596 1.3e-129 467.2 344 64.8
C02p09120 Brassica napus HOM05D005356 ORTHO05D006596 1.7e-129 466.8 344 64.8
CARHR195670 Cardamine hirsuta HOM05D005356 ORTHO05D006596 1.7e-129 466.8 352 63.6
MSTRG.22381 Avicennia marina HOM05D005356 ORTHO05D006596 2.8e-129 466.1 410 55.9
A02p04240 Brassica napus HOM05D005356 ORTHO05D006596 2.8e-129 466.1 387 59.4
BraA02t05387Z Brassica rapa HOM05D005356 ORTHO05D006596 2.8e-129 466.1 387 59.4
A10p21870 Brassica napus HOM05D005356 ORTHO05D006596 4.8e-129 465.3 346 64.7
Os04g0602400 Oryza sativa ssp. japonica HOM05D005356 ORTHO05D006596 4.8e-129 465.3 358 65.4
BcaC04g18781 Brassica carinata HOM05D005356 ORTHO05D006596 2.4e-128 463.0 346 64.2
BolC2t06824H Brassica oleracea HOM05D005356 ORTHO05D006596 4.1e-128 462.2 344 64.0
FAN03G1362 Fragaria x ananassa HOM05D005356 ORTHO05D006596 4.5e-127 458.8 314 71.0
VMungo0647G2360 Vigna mungo HOM05D005356 ORTHO05D006596 1.0e-126 457.6 305 71.1
AL6G28610 Arabidopsis lyrata HOM05D005356 ORTHO05D006596 1.7e-126 456.8 353 62.3
AT5G17520 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.7e-126 456.8 355 61.7
BcaB08g36764 Brassica carinata HOM05D005356 ORTHO05D006596 5.0e-126 455.3 353 62.3
C09p59620 Brassica napus HOM05D005356 ORTHO05D006596 1.9e-125 453.4 346 63.0
BolC9t58801H Brassica oleracea HOM05D005356 ORTHO05D006596 1.9e-125 453.4 346 63.0
Manes.09G130400 Manihot esculenta HOM05D005356 ORTHO05D006596 1.4e-123 447.2 345 63.8
PSO063G2098 Papaver somniferum HOM05D005356 ORTHO05D006596 8.8e-123 444.5 377 62.3
SGA_v2.0_scaffold19G08642 Striga asiatica HOM05D005356 ORTHO05D006596 2.0e-122 443.4 371 60.9
Actinidia33804 Actinidia chinensis HOM05D005356 ORTHO05D006596 4.4e-122 442.2 360 63.1
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 7.4e-122 441.4 337 64.1
MD01G1240200 Malus domestica HOM05D005356 ORTHO05D006596 1.4e-120 437.2 345 63.2
Lj3A883T53 Lonicera japonica HOM05D005356 ORTHO05D006596 3.1e-120 436.0 279 77.1
Duzib177G1190 Durio zibethinus HOM05D005356 ORTHO05D006596 7.7e-119 431.4 298 71.5
Rhsim09G0214300 Rhododendron simsii HOM05D005356 ORTHO05D006596 2.2e-118 429.9 621 44.4
A10p21860 Brassica napus HOM05D005356 ORTHO05D006596 3.2e-117 426.0 318 65.1
Cpa.g.sc43.152 Carica papaya HOM05D005356 ORTHO05D006596 3.0e-115 419.5 347 63.1
SEGI_37553 Sequoiadendron giganteum HOM05D005356 ORTHO05D006596 1.3e-113 414.1 328 59.8
Haze_00348 Corylus avellana HOM05D005356 ORTHO05D006596 1.6e-111 407.1 330 63.0
Gohir.D08G239900 Gossypium hirsutum HOM05D005356 ORTHO05D006596 5.5e-109 398.7 270 70.0
Ca_19620_v3 Cicer arietinum L. HOM05D005356 ORTHO05D006596 1.6e-108 397.1 269 69.9
ClCG02G007870 Citrullus lanatus HOM05D005356 ORTHO05D006596 4.1e-104 382.5 299 62.2
Mapoly0051s0014 Marchantia polymorpha HOM05D005356 ORTHO05D006596 5.7e-98 362.1 337 52.2
Pp3c6_18710 Physcomitrium patens HOM05D005356 ORTHO05D006596 3.1e-96 356.3 345 49.9
Carub.0006s1575 Capsella rubella HOM05D005356 ORTHO05D006596 1.7e-94 350.5 261 61.3
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis HOM05D005356 ORTHO05D006596 9.5e-93 344.7 328 51.2
CDE11G1065 Ceratophyllum demersum HOM05D005356 ORTHO05D006596 3.6e-92 342.8 347 52.7
MBI04_g30781_MAGBIO Magnolia biondii HOM05D005356 ORTHO05D006596 2.6e-90 336.7 267 63.3
SMO012G0030 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 1.8e-88 330.5 315 50.2
Pp3c24_890 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.3e-86 324.3 317 49.8
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 1.8e-83 313.9 305 57.0
CANSAT21G0168 Cannabis sativa HOM05D005356 ORTHO05D006596 1.2e-82 311.2 284 57.0
HPP92_022764 Vanilla planifolia HOM05D005356 ORTHO05D006596 1.0e-78 298.1 219 60.3
SMO118G0252 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 9.5e-77 291.6 281 53.0
CSS0033101 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 4.4e-74 282.7 255 60.0
Sc03g0005650 Simmondsia chinensis HOM05D005356 ORTHO05D006596 4.9e-73 279.3 203 68.0
CANSAT21G1370 Cannabis sativa HOM05D005356 ORTHO05D006596 5.1e-70 269.2 173 74.0
Pp3c23_14070 Physcomitrium patens HOM05D005356 ORTHO05D006596 2.4e-64 250.4 245 49.8
Zm00001eb071770 Zea mays HOM05D005356 ORTHO05D006596 1.2e-63 248.1 188 63.8
Actinidia04557 Actinidia chinensis HOM05D005356 ORTHO05D006596 9.6e-53 211.8 225 52.9
MCO10G093 Micromonas commoda HOM05D005356 ORTHO05D006596 2.7e-47 193.7 331 36.3
AT5G17523 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.5e-42 177.9 163 57.7
Thhalv10016106m.g Eutrema salsugineum HOM05D005356 ORTHO05D006596 8.4e-41 172.2 117 63.2
Cre12.g486600 Chlamydomonas reinhardtii HOM05D005356 ORTHO05D006596 2.8e-36 157.1 329 33.1
Pp3c24_840 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.1e-35 155.2 150 48.7
Glyma.09G223400 Glycine max HOM05D005356 ORTHO05D006596 7.1e-32 142.5 92 67.4
CSS0037967 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 9.3e-32 142.1 127 58.3
PRCOL_00004977 Prasinoderma coloniale HOM05D005356 ORTHO05D006596 9.6e-29 132.1 346 29.8
CBR_g17686 Chara braunii HOM05D005356 ORTHO05D006596 6.2e-28 129.4 97 58.8
HPP92_022763 Vanilla planifolia HOM05D005356 ORTHO05D006596 5.5e-16 89.7 109 50.5
Zm00001eb003380 Zea mays HOM05D001522 ORTHO05D001547 2.1e-15 87.8 78 60.3
CBR_g17688 Chara braunii HOM05D005356 ORTHO05D006596 6.1e-15 86.3 86 46.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (5 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (3 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings