Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g040010.3 Solanum lycopersicum HOM05D003838 ORTHO05D004444 6.5e-48 193.7 98 100.0
PGSC0003DMG400002948 Solanum tuberosum HOM05D003838 ORTHO05D004444 5.5e-31 137.5 83 85.5
Solyc04g040053.1 Solanum lycopersicum HOM05D003838 ORTHO05D004444 1.1e-26 123.2 79 81.0
Nitab4.5_0002208g0080 Nicotiana tabacum HOM05D003838 ORTHO05D004444 3.2e-23 111.7 76 73.7
Nitab4.5_0002162g0060 Nicotiana tabacum HOM05D003838 ORTHO05D004444 5.5e-23 110.9 76 73.7
Peaxi162Scf00970g00146 Petunia axillaris HOM05D003838 ORTHO05D004444 6.7e-21 104.0 76 65.8
Sopen04g016270 Solanum pennellii HOM05D003838 ORTHO05D004444 2.5e-15 85.5 55 81.8
CiPaw.01G100400 Carya illinoinensis HOM05D003838 ORTHO05D004444 7.2e-15 84.0 76 50.0
CsaV3_6G002030 Cucumis sativus L. HOM05D003838 ORTHO05D004444 1.2e-14 83.2 78 50.0
Prupe.3G140200 Prunus persica HOM05D003838 ORTHO05D004444 1.2e-14 83.2 76 53.9
Sed0023259 Sechium edule HOM05D003838 ORTHO05D004444 1.2e-14 83.2 76 52.6
GSVIVG01022417001 Vitis vinifera HOM05D003838 ORTHO05D004444 2.1e-14 82.4 74 52.7
Atru.chr3.1491 Acer truncatum HOM05D003838 ORTHO05D004444 2.7e-14 82.0 74 54.1
MD13G1208600 Malus domestica HOM05D003838 ORTHO05D004444 4.7e-14 81.3 77 51.9
Prupe.1G032600 Prunus persica HOM05D003838 ORTHO05D004444 4.7e-14 81.3 76 50.0
CANSAT78G1384 Cannabis sativa HOM05D003838 ORTHO05D004444 6.1e-14 80.9 76 50.0
Duzib212G0889 Durio zibethinus HOM05D003838 ORTHO05D004444 8.0e-14 80.5 78 47.4
vmacro23050 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 8.0e-14 80.5 84 48.8
TWI38G0658 Tripterygium wilfordii HOM05D003838 ORTHO05D004444 1.0e-13 80.1 76 55.3
Ciclev10022331m.g Citrus clementina HOM05D003838 ORTHO05D004444 1.4e-13 79.7 76 50.0
Nitab4.5_0000515g0040 Nicotiana tabacum HOM05D003838 ORTHO05D004444 2.3e-13 79.0 76 50.0
CSS0022226 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.0e-13 78.6 78 47.4
Potri.017G030000 Populus trichocarpa HOM05D003838 ORTHO05D004444 3.0e-13 78.6 76 50.0
Sabra17G0019500 Salix brachista HOM05D003838 ORTHO05D004444 3.0e-13 78.6 76 50.0
TAR376G0719 Trochodendron aralioides HOM05D003838 ORTHO05D004444 3.0e-13 78.6 74 48.6
CSS0031035 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 4.0e-13 78.2 78 47.4
PGSC0003DMG400029841 Solanum tuberosum HOM05D003838 ORTHO05D004444 4.0e-13 78.2 76 52.6
Actinidia26441 Actinidia chinensis HOM05D003838 ORTHO05D004444 5.2e-13 77.8 76 48.7
Solyc10g079580.2 Solanum lycopersicum HOM05D003838 ORTHO05D004444 5.2e-13 77.8 76 51.3
Peaxi162Scf00201g00019 Petunia axillaris HOM05D003838 ORTHO05D004444 6.8e-13 77.4 76 51.3
Sopen10g030220 Solanum pennellii HOM05D003838 ORTHO05D004444 6.8e-13 77.4 76 51.3
Eucgr.A00080 Eucalyptus grandis HOM05D003838 ORTHO05D004444 8.8e-13 77.0 74 50.0
Gohir.A10G137200 Gossypium hirsutum HOM05D003838 ORTHO05D004444 8.8e-13 77.0 76 47.4
Gorai.011G142700 Gossypium raimondii HOM05D003838 ORTHO05D004444 8.8e-13 77.0 76 47.4
SalBow7G4199 Salvia bowleyana HOM05D003838 ORTHO05D004444 8.8e-13 77.0 76 50.0
Thecc.04G179800 Theobroma cacao HOM05D003838 ORTHO05D004444 8.8e-13 77.0 78 46.2
vmacro01004 Vaccinium macrocarpon HOM05D003838 ORTHO05D004444 8.8e-13 77.0 70 52.9
CSS0030021 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 1.2e-12 76.6 78 47.4
COL.COLO4_07664 Corchorus olitorius HOM05D003838 ORTHO05D004444 1.2e-12 76.6 79 46.8
RcHm_v2.0_Chr4g0393311 Rosa chinensis HOM05D003838 ORTHO05D004444 1.2e-12 76.6 78 44.9
Cfa015168 Carpinus fangiana HOM05D003838 ORTHO05D004444 2.0e-12 75.9 76 43.4
Manes.15G070000 Manihot esculenta HOM05D003838 ORTHO05D004444 2.0e-12 75.9 76 50.0
Rhsim05G0049100 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.0e-12 75.9 74 50.0
CDE06G0074 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 2.6e-12 75.5 76 51.3
Hma1.2p1_0002F.1_g002170 Hydrangea macrophylla HOM05D003838 ORTHO05D004444 2.6e-12 75.5 76 47.4
MBI16_g18329_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 2.6e-12 75.5 74 50.0
Manes.03G131800 Manihot esculenta HOM05D003838 ORTHO05D004444 2.6e-12 75.5 77 49.4
Lj9P420T34 Lonicera japonica HOM05D003838 ORTHO05D004444 3.4e-12 75.1 76 47.4
SalBow5G3784 Salvia bowleyana HOM05D003838 ORTHO05D004444 3.4e-12 75.1 76 48.7
Cc07_g02090 Coffea canephora HOM05D003838 ORTHO05D004444 4.4e-12 74.7 78 48.7
FvH4_4g03700 Fragaria vesca HOM05D003838 ORTHO05D004444 4.4e-12 74.7 76 46.1
CDE08G1258 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 5.7e-12 74.3 76 51.3
Ah.11g050950 Amaranthus hybridus HOM05D003838 ORTHO05D004444 7.5e-12 73.9 75 46.7
QL03p038958 Quercus lobata HOM05D003838 ORTHO05D004444 7.5e-12 73.9 76 44.7
MSTRG.23130 Avicennia marina HOM05D003838 ORTHO05D004444 9.8e-12 73.6 77 46.8
FAN12G0299 Fragaria x ananassa HOM05D000189 ORTHO05D000474 1.7e-11 72.8 72 47.2
FAN17G3077 Fragaria x ananassa HOM05D003838 ORTHO05D004444 1.7e-11 72.8 76 46.1
PGR083G1767 Punica granatum HOM05D003838 ORTHO05D004444 1.7e-11 72.8 76 44.7
Rhsim09G0030300 Rhododendron simsii HOM05D003838 ORTHO05D004444 2.2e-11 72.4 74 48.6
Sp1g04800 Schrenkiella parvula HOM05D003838 ORTHO05D004444 2.2e-11 72.4 76 43.4
AUR62028681 Chenopodium quinoa HOM05D003838 ORTHO05D004444 2.8e-11 72.0 75 44.0
Haze_01511 Corylus avellana HOM05D003838 ORTHO05D004444 2.8e-11 72.0 72 44.4
TAR629G1244 Trochodendron aralioides HOM05D003838 ORTHO05D004444 3.7e-11 71.6 75 45.3
Migut.I00010 Erythranthe guttata HOM05D003838 ORTHO05D004444 4.8e-11 71.2 76 46.1
Oeu016385.1 Olea europaea HOM05D003838 ORTHO05D004444 4.8e-11 71.2 76 47.4
SGA_v2.0_scaffold25G10841 Striga asiatica HOM05D003838 ORTHO05D004444 4.8e-11 71.2 76 46.1
EL10Ac5g10613 Beta vulgaris HOM05D003838 ORTHO05D004444 6.3e-11 70.9 75 46.7
FAN22G1473 Fragaria x ananassa HOM05D003838 ORTHO05D004444 6.3e-11 70.9 76 44.7
arahy.Tifrunner.gnm1.ann1.0B6HPH Arachis hypogaea HOM05D003838 ORTHO05D004444 8.3e-11 70.5 76 44.7
arahy.Tifrunner.gnm1.ann1.536K79 Arachis hypogaea HOM05D003838 ORTHO05D004444 8.3e-11 70.5 76 44.7
RhsimUnG0118200 Rhododendron simsii HOM05D003838 ORTHO05D004444 8.3e-11 70.5 74 45.9
Sp1g04950 Schrenkiella parvula HOM05D003838 ORTHO05D004444 8.3e-11 70.5 82 40.2
Aqoxy7G02681 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.1e-10 70.1 66 50.0
PSO063G7239 Papaver somniferum HOM05D003838 ORTHO05D004444 1.1e-10 70.1 76 44.7
Cc06_g03220 Coffea canephora HOM05D003838 ORTHO05D004444 1.4e-10 69.7 77 46.8
AUR62008103 Chenopodium quinoa HOM05D003838 ORTHO05D004444 1.8e-10 69.3 75 41.3
RcHm_v2.0_Chr4g0390901 Rosa chinensis HOM05D003838 ORTHO05D004444 1.8e-10 69.3 76 42.1
RcHm_v2.0_Chr4g0390961 Rosa chinensis HOM05D003838 ORTHO05D004444 1.8e-10 69.3 76 42.1
Aqoxy7G02974 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 2.4e-10 68.9 75 44.0
Lalb_Chr10g0091981 Lupinus albus HOM05D003838 ORTHO05D004444 2.4e-10 68.9 76 42.1
CSS0020761 Camellia sinensis var. sinensis HOM05D003838 ORTHO05D004444 3.1e-10 68.6 78 41.0
ClCG08G004710 Citrullus lanatus HOM05D003838 ORTHO05D004444 3.1e-10 68.6 78 44.9
PSO782G5029 Papaver somniferum HOM05D003838 ORTHO05D004444 3.1e-10 68.6 76 43.4
Cpa.g.sc71.4 Carica papaya HOM05D003838 ORTHO05D004444 4.1e-10 68.2 75 38.7
Phvul.005G032200 Phaseolus vulgaris HOM05D003838 ORTHO05D004444 5.4e-10 67.8 76 42.1
SEGI_03408 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 5.4e-10 67.8 75 41.3
SGA_v2.0_scaffold90G27933 Striga asiatica HOM05D003838 ORTHO05D004444 5.4e-10 67.8 76 43.4
Nn1g08615 Nelumbo nucifera HOM05D003838 ORTHO05D004444 7.0e-10 67.4 76 42.1
CARHR005500 Cardamine hirsuta HOM05D003838 ORTHO05D004444 1.2e-09 66.6 76 42.1
Ca_14316_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 1.2e-09 66.6 76 40.8
ECA246G3227 Erigeron canadensis HOM05D003838 ORTHO05D004444 1.2e-09 66.6 76 43.4
QL10p048766 Quercus lobata HOM05D003838 ORTHO05D004444 1.2e-09 66.6 79 41.8
DCAR_006535 Daucus carota HOM05D003838 ORTHO05D004444 2.0e-09 65.9 76 43.4
PSO832G2359 Papaver somniferum HOM05D003838 ORTHO05D004444 2.7e-09 65.5 76 40.8
VMungo1080G0233 Vigna mungo HOM05D003838 ORTHO05D004444 2.7e-09 65.5 76 40.8
RcHm_v2.0_Chr4g0390851 Rosa chinensis HOM05D003838 ORTHO05D004444 3.5e-09 65.1 78 38.5
AL1G15920 Arabidopsis lyrata HOM05D003838 ORTHO05D004444 4.5e-09 64.7 78 37.2
PSO210G5426 Papaver somniferum HOM05D003838 ORTHO05D004444 5.9e-09 64.3 76 39.5
arahy.Tifrunner.gnm1.ann1.JCJT2N Arachis hypogaea HOM05D000735 ORTHO05D004669 7.7e-09 63.9 76 42.1
Ca_24199_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 7.7e-09 63.9 70 44.3
HanXRQChr16g0516761 Helianthus annuus HOM05D003838 ORTHO05D004444 7.7e-09 63.9 74 41.9
C05p04300 Brassica napus HOM05D003838 ORTHO05D004444 1.0e-08 63.5 78 37.2
HanXRQChr01g0021151 Helianthus annuus HOM05D003838 ORTHO05D004444 1.0e-08 63.5 74 41.9
Glyma.11G081600 Glycine max HOM05D003838 ORTHO05D004444 1.3e-08 63.2 76 39.5
HanXRQChr16g0504861 Helianthus annuus HOM05D003838 ORTHO05D004444 1.3e-08 63.2 76 40.8
ATR0665G504 Amborella trichopoda HOM05D003838 ORTHO05D004444 1.7e-08 62.8 76 39.5
HanXRQChr14g0439271 Helianthus annuus HOM05D003838 ORTHO05D004444 1.7e-08 62.8 74 40.5
Sc20g0000750 Simmondsia chinensis HOM05D003838 ORTHO05D004444 1.7e-08 62.8 76 40.8
BcaC05g24315 Brassica carinata HOM05D003838 ORTHO05D004444 2.2e-08 62.4 78 35.9
BolC5t29205H Brassica oleracea HOM05D003838 ORTHO05D004444 2.2e-08 62.4 78 35.9
Carub.0001s0533 Capsella rubella HOM05D003838 ORTHO05D004444 2.2e-08 62.4 78 35.9
Migut.L01638 Erythranthe guttata HOM05D003838 ORTHO05D004444 2.2e-08 62.4 76 43.4
HanXRQChr02g0057691 Helianthus annuus HOM05D003838 ORTHO05D004444 2.2e-08 62.4 74 40.5
SEGI_13821 Sequoiadendron giganteum HOM05D003838 ORTHO05D004444 2.2e-08 62.4 76 36.8
AT1G05970 Arabidopsis thaliana HOM05D003838 ORTHO05D004444 2.9e-08 62.0 78 34.6
Ca_25969_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 2.9e-08 62.0 76 39.5
CDE02G1933 Ceratophyllum demersum HOM05D003838 ORTHO05D004444 3.8e-08 61.6 74 43.2
Ca_24671_v3 Cicer arietinum L. HOM05D003838 ORTHO05D004444 5.0e-08 61.2 84 36.9
HanXRQChr10g0305171 Helianthus annuus HOM05D003838 ORTHO05D004444 5.0e-08 61.2 76 39.5
Lalb_Chr17g0336351 Lupinus albus HOM05D003838 ORTHO05D004444 5.0e-08 61.2 76 36.8
MBI16_g18328_MAGBIO Magnolia biondii HOM05D003838 ORTHO05D004444 5.0e-08 61.2 76 39.5
MELO3C008320.2 Cucumis melo HOM05D003838 ORTHO05D004444 6.5e-08 60.8 125 32.0
Thhalv10008811m.g Eutrema salsugineum HOM05D003838 ORTHO05D004444 6.5e-08 60.8 76 36.8
FAN12G3313 Fragaria x ananassa HOM05D003838 ORTHO05D004444 6.5e-08 60.8 76 36.8
Lsat_1_v5_gn_2_85780 Lactuca sativa HOM05D003838 ORTHO05D004444 6.5e-08 60.8 59 45.8
AUR62011801 Chenopodium quinoa HOM05D003838 ORTHO05D004444 8.5e-08 60.5 76 39.5
ECA238G0498 Erigeron canadensis HOM05D003838 ORTHO05D004444 1.1e-07 60.1 80 41.2
Aqoxy285s002 Aquilegia oxysepala HOM05D003838 ORTHO05D004444 1.5e-07 59.7 63 44.4
HanXRQChr02g0057701 Helianthus annuus HOM05D003838 ORTHO05D004444 1.5e-07 59.7 76 40.8
HanXRQChr12g0355781 Helianthus annuus HOM05D003838 ORTHO05D004444 1.5e-07 59.7 74 41.9
HanXRQChr16g0517051 Helianthus annuus HOM05D003838 ORTHO05D004444 1.5e-07 59.7 77 40.3
Nitab4.5_0024579g0010 Nicotiana tabacum HOM05D003838 ORTHO05D004444 2.5e-07 58.9 76 40.8
BraA10t42729Z Brassica rapa HOM05D003838 ORTHO05D004444 3.2e-07 58.5 78 33.3
Hund02940 Selenicereus undatus HOM05D003838 ORTHO05D004444 3.2e-07 58.5 75 37.3
A10p04640 Brassica napus HOM05D003838 ORTHO05D004444 4.2e-07 58.2 78 33.3
CARHR038440 Cardamine hirsuta HOM05D003838 ORTHO05D004444 4.2e-07 58.2 47 57.4
AUR62024648 Chenopodium quinoa HOM05D004658 ORTHO05D005927 5.5e-07 57.8 76 39.5
FvH4_4g02890 Fragaria vesca HOM05D003838 ORTHO05D004444 5.5e-07 57.8 76 35.5
Psat5g216120 Pisum sativum HOM05D003838 ORTHO05D004444 5.5e-07 57.8 76 35.5
Aa31LG1G8370 Aethionema arabicum HOM05D003838 ORTHO05D004444 7.2e-07 57.4 76 38.2
Medtr3g021420 Medicago truncatula HOM05D003838 ORTHO05D004444 7.2e-07 57.4 76 34.2
Medtr3g030930 Medicago truncatula HOM05D003838 ORTHO05D004444 7.2e-07 57.4 76 34.2
Lj3g0022900 Lotus japonicus HOM05D003838 ORTHO05D004444 1.2e-06 56.6 78 33.3
RcHm_v2.0_Chr4g0390871 Rosa chinensis HOM05D003838 ORTHO05D004444 1.6e-06 56.2 68 38.2
THA.LOC104826203 Tarenaya hassleriana HOM05D003838 ORTHO05D004444 1.6e-06 56.2 76 35.5
Hund09632 Selenicereus undatus HOM05D003838 ORTHO05D004444 2.1e-06 55.8 63 41.3
FAN17G0891 Fragaria x ananassa HOM05D003838 ORTHO05D004444 3.6e-06 55.1 69 39.1
Medtr7g090650 Medicago truncatula HOM05D003838 ORTHO05D004444 6.1e-06 54.3 70 35.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (4 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (9 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (3 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings