Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 8.5e-185 650.2 329 100.0
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 2.2e-180 635.6 334 97.3
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 4.4e-173 611.3 334 93.1
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 4.1e-147 525.0 335 80.6
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 6.1e-143 511.1 337 79.5
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 7.0e-131 471.1 334 72.8
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 4.3e-80 302.4 352 49.1
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 2.5e-67 260.0 319 46.4
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 4.2e-67 259.2 343 43.7
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 7.4e-64 248.4 332 45.2
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 1.7e-63 247.3 358 42.7
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 2.2e-63 246.9 352 43.2
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 1.4e-62 244.2 324 43.5
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 1.2e-61 241.1 324 42.3
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 5.0e-60 235.7 314 46.5
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 1.9e-59 233.8 326 44.5
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 2.5e-59 233.4 319 45.8
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 1.2e-58 231.1 329 38.9
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 1.8e-57 227.3 379 39.8
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 2.3e-57 226.9 321 42.7
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 2.6e-56 223.4 331 41.7
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 2.6e-56 223.4 320 43.1
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 1.3e-55 221.1 326 42.3
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 8.2e-55 218.4 325 41.5
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 5.9e-53 212.2 324 39.8
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 6.5e-52 208.8 247 48.6
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 1.1e-51 208.0 319 40.4
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 7.2e-51 205.3 343 42.0
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 7.2e-51 205.3 338 38.5
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 6.1e-50 202.2 317 39.7
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 8.0e-50 201.8 319 39.2
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 5.2e-49 199.1 324 39.5
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 9.7e-48 194.9 313 39.9
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 9.7e-48 194.9 327 39.4
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 1.3e-47 194.5 341 39.3
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 3.7e-47 193.0 328 39.0
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 8.2e-47 191.8 323 38.4
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 1.1e-46 191.4 313 39.3
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 7.0e-46 188.7 323 38.7
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 9.1e-46 188.3 358 37.4
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 2.7e-45 186.8 326 39.3
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.5e-43 180.3 324 36.1
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.2e-43 179.9 325 38.8
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.2e-43 179.9 330 39.7
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 3.2e-43 179.9 330 39.7
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 7.2e-43 178.7 325 37.2
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 3.6e-42 176.4 316 37.7
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 4.7e-42 176.0 318 38.7
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 1.0e-41 174.9 316 36.4
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.4e-41 174.5 349 34.4
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 3.0e-41 173.3 316 36.1
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 6.8e-41 172.2 323 35.9
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 1.5e-40 171.0 317 35.3
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 7.5e-40 168.7 319 37.9
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 1.7e-39 167.5 371 31.3
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 2.8e-39 166.8 351 34.5
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 8.3e-39 165.2 314 36.0
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 1.8e-38 164.1 316 35.8
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 3.1e-38 163.3 312 36.5
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 3.1e-38 163.3 318 34.9
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 5.4e-38 162.5 314 36.0
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.0e-37 160.6 314 35.0
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 2.1e-34 150.6 300 38.3
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 2.8e-34 150.2 356 31.2
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 1.5e-32 144.4 329 33.1
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 1.3e-31 141.4 246 41.1
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 2.2e-31 140.6 309 34.3
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 1.1e-30 138.3 287 35.2
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 1.4e-30 137.9 295 35.9
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 1.2e-29 134.8 117 55.6
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 1.1e-27 128.3 321 32.1
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 2.5e-27 127.1 216 39.4
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 6.1e-26 122.5 103 58.3
Lj7A603G61 Lonicera japonica HOM05D006554 ORTHO05D008778 1.3e-23 114.8 157 45.9
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 3.2e-22 110.2 102 53.9
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 1.0e-20 105.1 326 28.5
DCAR_002966 Daucus carota HOM05D006554 ORTHO05D008778 5.0e-20 102.8 227 33.0
Ca_06565_v3 Cicer arietinum L. HOM05D006554 ORTHO05D008778 2.5e-19 100.5 158 41.1
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 9.5e-19 98.6 326 26.4
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 1.6e-18 97.8 321 25.9
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 1.6e-18 97.8 321 25.9
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 3.6e-18 96.7 321 24.9
VMungo1383G3169 Vigna mungo HOM05D006554 ORTHO05D008778 4.7e-18 96.3 170 41.2
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 6.2e-18 95.9 326 25.8
Atru.chr6.2450 Acer truncatum HOM05D006554 ORTHO05D008778 8.0e-18 95.5 197 35.5
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 8.0e-18 95.5 322 26.4
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.1e-17 95.1 326 27.3
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 2.3e-17 94.0 120 38.3
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 3.1e-17 93.6 321 27.4
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 3.1e-17 93.6 325 26.2
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 6.8e-17 92.4 322 23.3
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 1.5e-16 91.3 124 38.7
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 1.5e-16 91.3 263 30.8
SEGI_16878 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 2.0e-16 90.9 382 24.1
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 2.6e-16 90.5 316 28.5
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 4.4e-16 89.7 156 35.3
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 5.8e-16 89.4 142 35.9
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 1.7e-15 87.8 129 35.7
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 2.9e-15 87.0 106 45.3
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 6.4e-15 85.9 250 30.4
COL.COLO4_29198 Corchorus olitorius HOM05D006554 ORTHO05D008778 1.1e-14 85.1 225 32.0
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.1e-14 83.2 159 37.1
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 9.2e-14 82.0 71 50.7
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 1.0e-12 78.6 327 27.5
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 1.3e-12 78.2 322 26.4
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 1.7e-12 77.8 164 32.3
PSO210G7616 Papaver somniferum HOM05D006554 ORTHO05D008778 8.6e-12 75.5 103 45.6
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 4.3e-11 73.2 183 35.0
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 1.2e-10 71.6 137 38.7
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 1.2e-10 71.6 178 33.1
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 2.1e-10 70.9 178 32.6
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 2.1e-10 70.9 183 34.4
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 2.1e-10 70.9 55 60.0
CDE09G1186 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 4.7e-10 69.7 158 32.3
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 6.2e-10 69.3 182 31.9
Cpa.g.sc130.62 Carica papaya HOM05D006554 ORTHO05D008778 6.8e-09 65.9 114 38.6
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 8.9e-09 65.5 86 38.4
CBR_g49972 Chara braunii HOM05D000336 ORTHO05D002705 2.0e-08 64.3 109 33.0
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 4.4e-08 63.2 63 47.6
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 9.9e-08 62.0 63 47.6
Pp3c22_7000 Physcomitrium patens HOM05D000336 ORTHO05D002705 1.7e-07 61.2 96 35.4
Eucgr.F01485 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.7e-07 60.1 78 38.5
Pp3c18_15420 Physcomitrium patens HOM05D000336 ORTHO05D002705 4.9e-07 59.7 96 36.5
MSTRG.4151 Avicennia marina HOM05D000336 ORTHO05D002705 6.4e-07 59.3 123 26.8
SalBow3G1252 Salvia bowleyana HOM05D000336 ORTHO05D002705 6.4e-07 59.3 97 32.0
Sc03g0007220 Simmondsia chinensis HOM05D006554 ORTHO05D008778 6.4e-07 59.3 207 29.5
SEGI_39566 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 8.3e-07 58.9 136 28.7
Gohir.D10G116100 Gossypium hirsutum HOM05D006554 ORTHO05D008778 1.1e-06 58.5 107 39.3
MBI02_g34318_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D002705 1.1e-06 58.5 123 28.5
Nitab4.5_0013605g0010 Nicotiana tabacum HOM05D000336 ORTHO05D002705 1.4e-06 58.2 123 26.0
CAN.G220.42 Capsicum annuum HOM05D000336 ORTHO05D002705 1.9e-06 57.8 120 25.8
Lsat_1_v5_gn_1_75080 Lactuca sativa HOM05D000336 ORTHO05D002705 1.9e-06 57.8 130 26.9
Pp3c19_8020 Physcomitrium patens HOM05D000336 ORTHO05D002705 1.9e-06 57.8 66 42.4
Pp3c21_9250 Physcomitrium patens HOM05D000336 ORTHO05D002705 1.9e-06 57.8 105 32.4
Potri.010G219200 Populus trichocarpa HOM05D000336 ORTHO05D002705 1.9e-06 57.8 119 31.1
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 1.9e-06 57.8 99 30.3
Lj2g0014987 Lotus japonicus HOM05D000336 ORTHO05D002705 4.1e-06 56.6 88 30.7
Psat4g111960 Pisum sativum HOM05D000336 ORTHO05D002705 4.1e-06 56.6 130 27.7
Sabra10G0169200 Salix brachista HOM05D000336 ORTHO05D002705 4.1e-06 56.6 119 28.6
Sc05g0003330 Simmondsia chinensis HOM05D000336 ORTHO05D002705 4.1e-06 56.6 123 27.6
Peaxi162Scf00602g00315 Petunia axillaris HOM05D000336 ORTHO05D002705 5.4e-06 56.2 123 25.2
Gorai.011G128000 Gossypium raimondii HOM05D006554 ORTHO05D008778 7.1e-06 55.8 107 38.3
Aqoxy2G01232 Aquilegia oxysepala HOM05D000336 ORTHO05D002705 9.2e-06 55.5 115 27.8
Gorai.001G185000 Gossypium raimondii HOM05D004314 ORTHO05D018179 9.2e-06 55.5 106 37.7

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (1 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (4 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings