Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 2.4e-212 741.9 369 100.0
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.5e-209 732.6 366 99.2
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 3.7e-189 664.8 364 93.1
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.9e-180 636.0 364 87.6
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 9.9e-174 613.6 361 85.9
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.6e-168 596.3 382 79.1
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.1e-160 569.3 371 74.9
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.8e-159 566.2 369 75.9
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 3.4e-158 562.0 370 75.4
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.4e-158 562.0 370 75.1
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 9.9e-158 560.5 369 75.3
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 9.9e-158 560.5 363 80.2
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.9e-157 558.9 370 75.1
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 4.2e-156 555.1 362 75.7
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 4.2e-156 555.1 362 75.7
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 7.1e-156 554.3 364 75.8
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 1.6e-155 553.1 359 75.2
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.6e-155 553.1 359 75.2
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.1e-155 552.7 331 79.8
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 3.5e-155 552.0 364 73.6
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 6.0e-155 551.2 331 79.5
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 7.8e-155 550.8 375 73.3
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.0e-154 550.4 334 78.4
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.3e-154 550.1 372 74.5
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.3e-154 550.1 364 73.6
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.7e-154 549.7 364 73.4
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.3e-154 549.3 361 75.1
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.0e-154 548.9 354 74.9
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.9e-154 548.5 342 78.9
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 5.1e-154 548.1 367 73.0
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 5.1e-154 548.1 323 79.3
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 6.6e-154 547.7 361 74.8
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 8.7e-154 547.4 329 79.3
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.9e-153 546.2 363 74.4
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.9e-153 546.2 381 72.2
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 5.6e-153 544.7 303 84.2
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 5.6e-153 544.7 369 74.8
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 7.3e-153 544.3 376 72.6
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 2.1e-152 542.7 328 79.9
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 3.6e-152 542.0 367 73.8
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 4.8e-152 541.6 370 72.4
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 4.8e-152 541.6 368 72.3
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 6.2e-152 541.2 330 78.5
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 3.1e-151 538.9 324 78.1
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 3.1e-151 538.9 365 72.9
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 3.1e-151 538.9 367 73.0
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 5.3e-151 538.1 297 85.2
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 9.0e-151 537.3 372 71.5
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.2e-150 537.0 371 73.0
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 3.4e-150 535.4 342 76.9
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 4.5e-150 535.0 348 75.0
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 9.9e-150 533.9 369 70.7
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.2e-149 532.7 324 78.1
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 3.8e-149 531.9 381 70.3
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 3.8e-149 531.9 326 77.3
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 4.2e-148 528.5 338 74.3
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 5.4e-148 528.1 324 77.2
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 9.3e-148 527.3 356 72.2
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.2e-147 526.9 352 71.9
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 2.1e-147 526.2 320 78.1
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 2.7e-147 525.8 335 74.3
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 7.9e-147 524.2 335 74.0
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 7.9e-147 524.2 340 73.8
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.3e-146 523.5 374 69.5
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 1.8e-146 523.1 362 69.6
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.3e-146 522.7 380 69.2
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.3e-146 522.7 380 69.2
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 3.9e-146 521.9 371 70.1
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 1.9e-145 519.6 443 61.2
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.3e-145 518.8 304 79.3
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.3e-144 516.9 333 73.3
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.3e-144 516.9 371 69.3
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.1e-143 513.8 334 73.7
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 1.2e-142 510.4 427 63.0
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 7.6e-142 507.7 304 76.0
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.8e-141 505.4 345 70.1
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 6.4e-141 504.6 331 71.6
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.6e-139 500.0 347 70.6
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.1e-137 493.8 477 56.6
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.6e-136 490.0 382 66.8
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 3.7e-136 488.8 305 75.4
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.8e-135 486.5 346 69.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 3.1e-135 485.7 290 78.3
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.5e-134 483.4 331 71.0
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.0e-134 483.0 303 74.9
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 4.5e-134 481.9 303 75.2
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 8.4e-133 477.6 384 63.0
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 5.5e-132 474.9 402 60.4
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 7.9e-131 471.1 304 71.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.0e-130 469.2 314 71.3
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.9e-130 468.8 363 64.2
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.4e-127 459.5 296 73.3
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 5.3e-127 458.4 296 73.0
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 9.4e-124 447.6 368 60.6
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.6e-123 445.7 363 61.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 1.5e-118 430.3 297 70.4
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 4.1e-111 405.6 359 60.7
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 6.7e-106 388.3 228 79.4
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.0e-105 386.7 312 64.7
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.1e-103 380.9 324 55.9
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.8e-103 380.2 312 57.4
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 1.2e-102 377.5 293 59.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 4.7e-99 365.5 213 79.3
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 4.7e-99 365.5 213 79.3
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 1.0e-98 364.4 213 78.9
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 3.7e-96 355.9 234 69.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.4e-95 354.0 322 52.8
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.2e-91 340.9 213 75.6
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.0e-86 323.6 231 68.4
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.3e-85 320.9 292 59.2
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 5.7e-81 305.4 290 48.6
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 8.0e-75 285.0 304 45.1
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 8.9e-74 281.6 287 46.7
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 5.8e-73 278.9 230 61.7
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.3e-72 277.7 177 74.0
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 2.3e-69 266.9 276 46.4
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 7.3e-68 261.9 157 80.3
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 2.8e-59 233.4 135 83.0
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 5.8e-41 172.6 161 50.9
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.2e-39 166.8 108 66.7
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 6.0e-38 162.5 110 71.8
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 2.4e-34 150.6 108 66.7
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 1.4e-31 141.4 97 64.9
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.2e-30 138.3 118 58.5
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.7e-24 117.9 87 62.1
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.1e-20 105.1 64 71.9
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 2.2e-16 90.9 47 85.1
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 2.2e-16 90.9 47 85.1
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 8.5e-08 62.4 41 70.7
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 1.2e-06 58.5 48 58.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings