Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.1e-204 714.5 368 100.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 4.7e-184 647.9 332 99.7
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 3.0e-183 645.2 332 99.1
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 4.9e-181 637.9 332 97.6
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.0e-179 632.5 333 97.0
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.6e-179 631.3 333 97.3
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 8.6e-178 627.1 325 97.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.0e-171 605.9 332 92.2
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.7e-170 602.8 332 92.2
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 6.6e-170 600.9 328 92.4
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 4.3e-169 598.2 332 91.0
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.4e-166 588.6 327 90.2
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.4e-164 581.3 332 88.6
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.5e-163 578.6 332 88.3
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.5e-163 578.6 332 87.0
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 6.0e-163 577.8 332 86.7
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.3e-162 575.9 359 81.9
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 8.6e-162 573.9 332 86.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.1e-161 573.5 332 86.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.1e-161 573.5 330 87.0
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 4.3e-161 571.6 327 87.8
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 7.3e-161 570.9 329 86.9
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 3.6e-160 568.5 326 87.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.6e-160 568.5 332 85.5
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 6.2e-160 567.8 328 86.6
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 8.1e-160 567.4 332 85.8
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.1e-159 567.0 327 87.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.1e-159 567.0 364 79.7
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.4e-159 565.8 327 85.3
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.1e-159 565.5 327 87.2
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.1e-159 565.5 327 87.2
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 3.1e-159 565.5 327 85.3
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 4.0e-159 565.1 332 85.2
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 8.9e-159 563.9 328 86.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 8.9e-159 563.9 330 85.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.2e-158 563.5 332 85.2
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.2e-158 563.5 327 85.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.2e-158 563.5 327 86.5
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.5e-158 563.1 327 85.0
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.6e-158 562.4 329 85.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 2.6e-158 562.4 330 84.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.6e-158 560.8 332 84.6
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.3e-157 560.1 325 86.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.7e-157 559.7 327 84.7
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.7e-157 559.7 332 84.3
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.2e-157 559.3 327 85.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.9e-157 558.9 327 84.7
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 3.8e-157 558.5 332 84.9
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.4e-157 557.4 332 84.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.4e-156 556.6 332 84.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.4e-156 556.6 327 84.4
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.4e-156 555.8 330 84.2
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.4e-156 555.8 332 84.9
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.2e-156 555.4 325 86.5
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 3.2e-156 555.4 325 86.5
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.2e-156 555.4 330 84.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 5.4e-156 554.7 327 85.0
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.1e-156 554.3 332 84.6
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 9.2e-156 553.9 329 84.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 9.2e-156 553.9 332 84.3
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-155 551.6 338 83.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 4.6e-155 551.6 332 84.3
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.0e-154 550.4 300 92.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.3e-154 550.1 331 83.7
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.3e-154 549.3 327 85.0
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.0e-154 548.9 327 85.0
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.0e-154 548.9 327 84.7
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 3.9e-154 548.5 332 83.1
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 5.1e-154 548.1 327 84.7
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 5.1e-154 548.1 327 84.7
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 5.1e-154 548.1 327 84.7
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 5.1e-154 548.1 327 84.7
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 6.6e-154 547.7 327 84.7
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 8.7e-154 547.4 331 83.4
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.5e-153 546.6 327 84.7
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.5e-153 546.6 332 83.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.5e-153 546.6 332 83.4
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-153 546.2 332 82.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 9.6e-153 543.9 325 84.3
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.2e-152 543.5 327 84.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.6e-152 543.1 327 84.1
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.1e-151 540.4 327 83.5
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.0e-151 538.5 315 86.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.6e-150 535.8 331 80.4
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 3.4e-150 535.4 386 73.6
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 7.6e-150 534.3 331 80.4
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 7.6e-150 534.3 331 80.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.7e-149 533.1 363 77.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 2.9e-149 532.3 327 82.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.9e-149 532.3 332 81.0
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 4.9e-149 531.6 327 82.9
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.2e-148 528.5 325 82.2
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-147 526.9 331 79.8
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-147 525.4 331 79.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 5.1e-146 521.5 455 62.6
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 6.6e-146 521.2 328 82.6
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 1.3e-144 516.9 327 79.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.1e-144 516.2 304 83.9
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.4e-143 513.5 338 78.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 8.4e-141 504.2 328 78.4
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.2e-140 502.3 302 85.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.2e-140 501.9 332 78.9
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.0e-138 497.3 330 77.0
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.3e-137 491.9 330 78.8
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.6e-136 490.0 330 73.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.4e-135 486.9 329 78.4
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 9.0e-135 484.2 330 74.2
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.9e-134 480.7 333 77.8
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.2e-132 475.3 377 67.6
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 4.2e-132 475.3 332 75.6
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.1e-131 473.0 326 71.5
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.2e-126 457.2 323 76.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.9e-125 452.6 279 79.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.1e-115 419.9 324 63.6
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.8e-114 414.5 233 89.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.5e-110 403.7 318 62.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-110 403.7 234 85.9
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 6.5e-109 398.3 330 61.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.8e-104 382.9 230 85.2
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 3.2e-100 369.4 272 71.0
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.2e-99 367.5 313 63.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.8e-95 353.6 332 63.0
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-91 339.7 197 86.8
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 6.7e-90 335.1 240 68.3
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.4e-87 326.6 333 58.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-85 320.5 220 77.3
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 9.4e-84 314.7 220 75.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.0e-82 311.2 167 92.8
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.1e-79 299.3 220 73.6
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.5e-78 295.8 165 89.7
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 5.2e-74 282.3 333 44.1
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.5e-68 264.2 279 57.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 3.3e-68 263.1 165 78.8
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.2e-66 255.8 327 50.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-59 232.6 135 83.0
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 5.1e-53 212.6 130 80.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.1e-43 178.7 102 84.3
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.4e-39 167.9 160 57.5
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.4e-39 167.2 181 54.7
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 4.6e-38 162.9 150 56.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.3e-36 156.8 103 75.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 4.3e-36 156.4 92 85.9
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.8e-34 151.0 89 80.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.4e-34 150.6 88 84.1
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 3.5e-30 136.7 91 80.2
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.3e-29 134.8 77 88.3
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 8.7e-29 132.1 69 84.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.5e-28 131.3 74 86.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.3e-28 130.2 80 78.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.2e-25 121.7 72 79.2
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.4e-25 120.2 75 76.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 4.2e-23 113.2 72 80.6
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.8e-21 107.8 67 82.1
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 6.7e-21 105.9 69 73.9
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.2e-19 99.4 65 78.5
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.2e-09 68.6 85 49.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.4e-07 61.6 34 82.4
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 1.9e-07 61.2 33 84.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings