Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.4e-182 642.9 331 100.0
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.2e-166 587.8 331 90.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.2e-166 587.8 331 90.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 5.2e-166 587.8 331 90.9
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.5e-165 586.3 331 90.6
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 9.8e-165 583.6 331 90.0
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.0e-161 573.5 329 86.9
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.3e-161 573.2 329 86.9
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 3.9e-161 571.6 329 86.9
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 5.6e-160 567.8 329 86.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.1e-158 562.0 327 86.9
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.1e-158 562.0 328 86.0
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.0e-158 561.6 329 85.4
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 6.8e-158 560.8 327 86.9
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 8.9e-158 560.5 325 87.1
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.6e-157 558.9 327 85.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.6e-157 558.9 328 85.4
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 86.2
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 3.4e-157 558.5 330 85.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 86.2
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 7.5e-157 557.4 327 85.9
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.5e-157 557.4 328 85.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 9.8e-157 557.0 327 85.3
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 9.8e-157 557.0 326 86.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 8.3e-156 553.9 327 85.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 1.1e-155 553.5 327 84.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.1e-155 553.5 327 84.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.4e-155 553.1 327 85.9
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 329 85.7
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 329 85.7
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.4e-155 552.4 327 84.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.1e-155 551.6 327 85.0
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.1e-155 551.6 327 84.4
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 327 84.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.2e-154 550.1 327 84.1
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.2e-154 550.1 327 85.0
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.0e-154 547.7 325 84.9
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.0e-154 547.7 330 83.9
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 7.8e-154 547.4 328 84.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.0e-153 547.0 327 83.8
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.3e-153 546.6 327 83.5
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.7e-153 546.2 330 83.3
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.3e-153 545.8 325 85.2
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.9e-153 545.0 330 82.7
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 5.0e-153 544.7 326 84.0
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 6.6e-153 544.3 327 83.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.6e-153 544.3 328 84.1
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.6e-153 543.9 327 84.1
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.1e-152 543.5 354 78.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 2.5e-152 542.3 328 83.2
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.3e-152 541.6 326 84.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.3e-152 541.6 326 83.7
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 7.3e-152 540.8 327 84.1
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.3e-152 540.8 327 83.2
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 7.3e-152 540.8 327 84.1
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 82.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.6e-151 539.7 327 84.1
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.1e-151 539.3 327 84.1
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-151 538.1 327 82.9
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 4.7e-151 538.1 327 83.2
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 8.1e-151 537.3 327 83.2
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.1e-150 537.0 327 83.5
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 4.0e-150 535.0 327 82.6
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 5.2e-150 534.6 327 83.5
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 6.8e-150 534.3 327 83.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 6.8e-150 534.3 327 83.2
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-149 533.5 333 82.6
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.2e-149 533.5 327 82.3
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.0e-149 532.7 327 82.0
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 327 82.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 327 82.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.4e-149 531.6 327 82.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.4e-149 531.6 327 82.3
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.4e-149 531.6 381 75.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 7.5e-149 530.8 327 82.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.8e-149 530.4 367 76.6
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 81.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.7e-148 529.6 327 81.3
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.7e-148 529.6 327 81.3
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.7e-148 529.6 327 81.3
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.7e-148 529.6 327 81.3
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.9e-148 528.9 329 81.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 3.7e-148 528.5 327 81.7
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 8.3e-148 527.3 327 81.3
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.1e-147 526.9 325 81.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 4.6e-146 521.5 327 80.7
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.9e-145 518.5 327 81.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.9e-145 518.5 305 84.6
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.9e-144 516.2 327 80.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-143 513.5 327 79.8
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.2e-143 513.5 327 80.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 6.2e-143 511.1 327 78.9
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.1e-142 510.4 300 84.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-142 510.0 314 81.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 8.9e-142 507.3 451 62.1
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 8.9e-142 507.3 325 78.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.2e-141 506.9 328 79.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.9e-140 501.5 327 78.0
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 4.6e-138 495.0 327 77.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 4.6e-138 495.0 327 76.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 3.0e-137 492.3 328 77.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 6.2e-135 484.6 327 77.7
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 6.2e-135 484.6 327 75.8
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.8e-134 483.0 326 74.8
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.3e-132 476.9 330 74.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.6e-130 468.4 296 81.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.3e-129 466.1 326 74.8
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-127 460.3 373 67.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-127 459.5 327 74.6
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.1e-126 455.7 328 74.1
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 5.8e-125 451.4 332 72.9
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.6e-122 443.4 279 78.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 5.8e-117 424.9 323 70.3
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.1e-110 404.1 324 61.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 4.9e-108 395.2 326 62.3
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.2e-107 392.5 234 83.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 7.1e-107 391.3 318 61.3
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.9e-105 385.6 233 82.0
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.4e-96 354.8 313 62.0
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.3e-95 354.0 272 68.0
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.7e-92 343.6 327 62.1
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.6e-90 335.9 197 85.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.3e-87 327.4 234 69.2
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.8e-87 326.2 224 73.7
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.8e-84 315.8 220 75.5
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 5.0e-84 315.5 333 56.5
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.2e-82 310.8 167 91.6
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-82 310.1 220 73.6
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.1e-78 295.8 220 72.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 5.7e-72 275.4 333 43.5
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 9.4e-67 258.1 163 79.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.3e-63 247.7 160 78.1
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.8e-62 243.8 267 53.2
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.1e-62 243.0 327 48.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.8e-55 219.9 131 82.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 9.5e-51 204.9 131 78.6
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.3e-39 165.2 99 81.8
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 3.2e-38 163.3 196 48.0
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 2.0e-37 160.6 160 55.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 7.8e-37 158.7 210 47.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-34 150.6 103 71.8
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 8.9e-33 145.2 87 85.1
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-30 138.3 83 79.5
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-30 136.0 88 76.1
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 9.2e-30 135.2 80 83.8
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.3e-28 131.3 77 85.7
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-27 127.5 74 83.8
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.5e-27 127.1 86 79.1
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-26 124.4 69 82.6
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 2.2e-23 114.0 84 69.0
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.4e-22 111.3 72 77.8
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.4e-22 110.5 75 72.0
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 3.0e-20 103.6 63 81.0
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 5.6e-19 99.4 62 82.3
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.4e-16 90.1 61 77.0
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.6e-10 70.1 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 46 65.2
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 6.4e-07 59.3 36 75.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings