Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 7.4e-150 533.9 274 100.0
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 1.7e-61 240.4 309 49.5
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 1.9e-57 226.9 293 48.1
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 3.3e-57 226.1 286 47.6
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 7.3e-57 224.9 180 65.6
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 2.8e-56 223.0 193 59.6
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 3.6e-56 222.6 158 70.9
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 1.1e-55 221.1 206 58.3
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 4.0e-55 219.2 220 54.1
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 5.2e-55 218.8 213 55.9
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 9.0e-55 218.0 305 46.2
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 9.0e-55 218.0 291 47.8
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 1.5e-54 217.2 180 62.8
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 1.5e-54 217.2 167 65.3
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 2.6e-54 216.5 186 57.5
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 9.9e-54 214.5 153 67.3
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.7e-53 213.8 303 46.2
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 2.2e-53 213.4 264 47.7
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 3.8e-53 212.6 209 55.5
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 3.8e-53 212.6 173 61.3
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 4.9e-53 212.2 151 65.6
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 6.4e-53 211.8 303 45.9
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 6.4e-53 211.8 296 46.6
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 6.4e-53 211.8 150 67.3
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.1e-52 211.1 303 45.5
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.1e-52 211.1 165 63.6
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 2.4e-52 209.9 146 71.2
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 2.4e-52 209.9 293 44.7
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 3.2e-52 209.5 164 64.0
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 5.4e-52 208.8 173 64.2
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 7.1e-52 208.4 158 66.5
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 7.1e-52 208.4 236 49.2
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.2e-51 207.6 265 44.2
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 1.6e-51 207.2 202 54.5
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 1.6e-51 207.2 238 50.0
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.6e-51 207.2 265 44.2
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 2.1e-51 206.8 292 45.5
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 3.5e-51 206.1 268 46.3
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 4.6e-51 205.7 161 63.4
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 4.6e-51 205.7 186 57.5
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 6.0e-51 205.3 176 59.7
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 6.0e-51 205.3 278 46.4
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 1.3e-50 204.1 146 67.8
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 5.1e-50 202.2 287 46.0
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 6.6e-50 201.8 183 56.3
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 1.9e-49 200.3 183 55.7
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 2.5e-49 199.9 285 44.9
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 2.5e-49 199.9 189 57.7
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 4.3e-49 199.1 220 52.3
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 5.6e-49 198.7 179 58.1
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 9.6e-49 198.0 173 57.2
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 9.6e-49 198.0 168 63.1
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 3.6e-48 196.1 248 45.2
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 6.9e-47 191.8 222 47.7
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 9.0e-47 191.4 204 51.5
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 2.0e-46 190.3 281 45.2
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 3.4e-46 189.5 223 48.0
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 9.9e-46 188.0 144 66.0
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 3.8e-45 186.0 168 60.1
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 3.8e-45 186.0 168 60.1
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 6.4e-45 185.3 164 58.5
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 1.1e-44 184.5 189 52.4
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 1.6e-43 180.6 168 58.3
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 1.6e-43 180.6 232 47.0
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 2.7e-43 179.9 172 54.7
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 3.5e-43 179.5 157 56.7
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 7.9e-43 178.3 232 46.6
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 7.9e-43 178.3 232 46.6
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 1.0e-42 177.9 178 53.4
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 1.0e-42 177.9 178 53.4
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 1.8e-42 177.2 165 55.8
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 3.9e-42 176.0 164 56.7
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.9e-42 176.0 140 62.1
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 8.7e-42 174.9 169 55.0
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 1.1e-41 174.5 169 53.8
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 1.1e-41 174.5 166 55.4
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 7.4e-41 171.8 176 54.0
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 1.6e-40 170.6 168 55.4
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 2.1e-40 170.2 167 56.3
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 2.1e-40 170.2 190 47.4
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 4.8e-40 169.1 167 55.1
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 6.2e-40 168.7 168 54.2
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 6.2e-40 168.7 152 52.6
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 1.1e-39 167.9 258 43.8
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 1.8e-39 167.2 166 53.6
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 4.0e-39 166.0 165 52.7
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 4.5e-38 162.5 165 52.1
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 7.6e-38 161.8 180 49.4
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 2.2e-37 160.2 260 39.2
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 3.8e-37 159.5 159 49.7
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 4.9e-37 159.1 257 44.0
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 2.5e-33 146.7 117 60.7
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 7.4e-33 145.2 117 59.8
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 2.1e-32 143.7 117 59.8
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 8.2e-32 141.7 260 40.0
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 2.4e-31 140.2 117 60.7
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 6.9e-31 138.7 183 47.0
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 1.2e-30 137.9 117 55.6
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 1.2e-30 137.9 206 39.8
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 1.5e-30 137.5 124 57.3
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 1.3e-29 134.4 166 44.6
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 2.7e-27 126.7 115 56.5
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 6.9e-23 112.1 122 47.5
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 1.7e-21 107.5 143 46.9
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 1.9e-20 104.0 225 36.0
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 3.7e-16 89.7 146 38.4
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.4e-15 87.8 67 62.7
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 4.1e-15 86.3 81 54.3
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 2.6e-14 83.6 152 36.8
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 1.2e-11 74.7 132 38.6
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 2.1e-11 73.9 86 51.2
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 3.0e-10 70.1 39 82.1
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 2.0e-09 67.4 98 44.9
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 2.8e-08 63.5 51 62.7
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.4e-07 61.2 303 26.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings