Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 0.0e+00 1209.9 691 100.0
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 2.5e-186 656.4 500 65.2
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 2.2e-182 643.3 500 63.4
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 6.3e-182 641.7 502 63.9
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 8.3e-182 641.3 498 64.3
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 7.7e-180 634.8 502 63.9
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 1.3e-179 634.0 497 62.8
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 6.5e-179 631.7 501 63.3
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.5e-178 630.6 502 62.7
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.5e-178 627.9 497 62.4
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 9.5e-178 627.9 486 63.8
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 5.4e-173 612.1 501 60.7
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 9.2e-173 611.3 499 61.1
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.5e-170 604.0 501 60.5
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.8e-169 599.7 518 60.8
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 4.7e-169 599.0 502 60.4
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 2.0e-167 593.6 527 57.1
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 1.7e-166 590.5 500 58.0
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 1.7e-166 590.5 501 57.7
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.4e-165 586.6 530 57.0
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 4.1e-165 585.9 500 57.6
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 5.4e-165 585.5 493 60.2
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 7.0e-165 585.1 504 59.5
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 8.6e-163 578.2 496 59.1
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 1.1e-162 577.8 500 57.2
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 2.5e-162 576.6 500 56.8
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 5.6e-162 575.5 493 59.8
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 5.6e-162 575.5 496 59.3
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 2.1e-161 573.5 496 58.1
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 1.8e-160 570.5 502 58.0
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 2.6e-159 566.6 501 57.1
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 2.6e-159 566.6 502 56.8
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 3.4e-159 566.2 507 55.6
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 5.8e-159 565.5 500 56.8
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 7.5e-159 565.1 486 57.6
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 1.3e-158 564.3 444 62.8
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.0e-155 554.7 501 55.7
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.7e-155 553.9 502 56.8
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 8.6e-155 551.6 476 57.1
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 1.6e-153 547.4 491 56.6
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 1.6e-153 547.4 500 56.4
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 2.3e-152 543.5 513 56.7
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 3.4e-151 539.7 526 53.0
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 4.4e-151 539.3 502 54.8
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 9.9e-151 538.1 504 53.8
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 1.1e-149 534.6 492 56.1
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 5.4e-149 532.3 492 55.7
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 5.1e-147 525.8 503 53.7
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.9e-146 523.9 491 55.2
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 6.2e-145 518.8 425 60.7
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 6.2e-145 518.8 520 51.0
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 1.1e-144 518.1 522 52.5
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 2.4e-144 516.9 502 53.2
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 3.4e-143 513.1 503 53.1
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 4.9e-142 509.2 508 53.7
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.0e-139 501.5 495 52.3
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.0e-136 489.6 497 51.1
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 1.2e-135 488.0 407 59.7
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 1.5e-135 487.6 435 57.0
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 6.4e-134 482.3 437 57.0
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 1.1e-133 481.5 535 47.5
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 3.5e-132 476.5 482 50.8
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 1.7e-131 474.2 399 57.6
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 2.1e-129 467.2 400 56.8
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 1.4e-128 464.5 419 57.0
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 5.3e-128 462.6 506 47.8
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 6.9e-128 462.2 415 57.6
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 2.0e-127 460.7 511 48.5
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 2.0e-127 460.7 506 48.4
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.9e-127 458.4 530 48.5
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 2.9e-126 456.8 511 46.8
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 3.2e-125 453.4 511 46.8
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 1.6e-124 451.1 504 48.8
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 1.6e-124 451.1 504 48.8
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 3.5e-124 449.9 500 48.0
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 5.1e-123 446.0 499 45.9
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.1e-122 444.9 503 46.7
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 1.5e-122 444.5 502 49.0
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 2.5e-122 443.7 532 45.9
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 5.6e-122 442.6 532 45.9
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 7.4e-122 442.2 518 48.3
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 7.4e-122 442.2 502 48.8
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 4.5e-119 433.0 330 61.8
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.4e-117 427.9 519 46.1
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 2.3e-115 420.6 354 60.2
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 4.3e-114 416.4 319 61.1
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 5.3e-112 409.5 503 44.7
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 4.5e-111 406.4 432 49.5
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.3e-110 404.8 477 45.7
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 1.5e-106 391.3 335 56.1
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.6e-105 387.9 557 42.4
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 1.2e-103 381.7 499 44.3
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 6.5e-102 375.9 338 53.3
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 3.6e-100 370.2 501 40.9
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 4.6e-100 369.8 354 55.4
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 5.5e-93 346.3 511 41.3
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 1.5e-87 328.2 389 46.0
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.0e-83 315.5 234 62.0
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.0e-75 287.3 283 56.5
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.4e-64 251.9 194 60.8
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 3.3e-61 240.7 286 50.3
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 5.7e-58 229.9 184 57.1
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 4.0e-51 207.2 184 60.3
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 1.6e-44 185.3 170 58.8
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 6.4e-41 173.3 151 62.3
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.1e-40 172.6 171 55.0
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 4.1e-40 170.6 164 58.5
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 3.9e-38 164.1 145 62.1
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 1.1e-21 109.4 205 29.8
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 8.4e-17 93.2 93 54.8
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.6e-15 87.4 60 65.0
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 1.0e-14 86.3 166 30.1
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 9.6e-13 79.7 68 61.8
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 1.4e-11 75.9 81 50.6
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 2.9e-09 68.2 42 73.8
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 1.3e-06 59.3 50 62.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (3 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (3 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings