Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 5.9e-298 1026.9 584 100.0
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 2.4e-137 493.4 552 58.5
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.9e-135 485.7 557 58.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 4.6e-133 479.2 572 57.5
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 3.3e-131 473.0 513 60.2
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 2.8e-130 469.9 559 56.0
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 8.4e-127 458.4 560 56.1
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.4e-126 457.6 517 60.0
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.9e-126 457.2 495 58.6
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.0e-124 451.4 515 58.8
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 2.3e-124 450.3 547 56.3
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.5e-123 446.8 562 55.3
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.6e-123 445.7 556 56.3
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 5.6e-123 445.7 516 59.3
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 4.8e-122 442.6 520 58.3
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.5e-120 437.6 509 57.2
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 2.6e-120 436.8 507 57.2
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 1.1e-118 431.4 499 58.1
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.4e-118 430.3 509 58.2
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 9.3e-118 428.3 564 55.3
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.7e-117 426.8 516 56.2
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 4.6e-117 426.0 555 55.0
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.8e-116 424.1 532 56.4
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 5.6e-115 419.1 554 52.3
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 7.4e-115 418.7 489 51.3
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.3e-114 417.9 556 52.9
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.3e-114 417.9 428 62.9
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 9.0e-113 411.8 476 58.0
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 7.6e-112 408.7 558 51.1
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.4e-110 404.4 569 43.8
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.9e-110 404.1 550 52.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.2e-110 403.3 538 54.6
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 7.1e-110 402.1 530 53.2
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 9.3e-110 401.7 546 53.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.8e-108 397.5 561 52.6
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 3.0e-108 396.7 517 54.0
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.0e-108 396.7 567 51.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 4.3e-107 392.9 432 62.7
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 9.6e-107 391.7 518 54.2
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 2.8e-106 390.2 550 52.5
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 9.0e-105 385.2 534 52.8
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 7.6e-104 382.1 546 50.7
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 6.5e-103 379.0 488 55.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.9e-102 377.5 562 50.7
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 9.3e-102 375.2 553 49.5
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.1e-101 374.0 554 50.4
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 2.7e-101 373.6 482 54.6
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.5e-101 373.2 525 51.4
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.8e-100 370.9 560 47.7
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.5e-99 367.9 506 44.3
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 4.3e-99 366.3 518 51.9
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.6e-98 364.4 564 48.9
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 4.8e-98 362.8 516 51.7
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 3.1e-97 360.1 565 48.7
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 6.9e-97 359.0 564 48.6
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 6.9e-97 359.0 451 57.0
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.0e-96 357.5 506 52.6
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 5.9e-96 355.9 588 46.6
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 7.7e-96 355.5 560 50.2
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.0e-95 355.1 558 48.2
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 3.8e-95 353.2 566 48.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.1e-94 351.7 479 54.7
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.6e-93 347.8 486 54.1
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 6.1e-93 345.9 324 58.6
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.8e-92 344.4 468 53.4
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 2.3e-92 344.0 492 52.2
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 6.7e-92 342.4 375 62.9
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 4.8e-90 336.3 562 47.2
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 4.5e-88 329.7 562 46.6
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.1e-86 325.1 551 45.4
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.6e-85 321.2 309 68.9
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 7.9e-85 318.9 559 46.9
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 3.0e-84 317.0 342 62.9
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.8e-76 291.2 331 48.9
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.0e-75 287.7 302 53.0
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.4e-73 280.8 475 43.8
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 3.5e-72 276.9 317 48.9
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.7e-63 248.1 271 49.4
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 2.0e-59 234.6 516 42.2
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 7.7e-56 222.6 239 69.5
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 7.2e-54 216.1 429 34.7
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.6e-53 214.9 267 46.1
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.4e-49 201.8 275 59.3
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.6e-48 198.4 276 59.4
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-41 175.6 180 49.4
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.5e-40 170.6 443 39.1
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 4.3e-38 163.7 271 56.1
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.4e-36 158.7 129 59.7
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.8e-36 158.3 183 49.2
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 8.9e-36 156.0 391 43.5
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.1e-31 140.2 98 64.3
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.1e-29 134.8 505 25.1
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 7.6e-27 126.3 126 48.4
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 6.4e-26 123.2 175 43.4
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 4.1e-25 120.6 121 52.9
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 4.7e-21 107.1 127 48.8
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 6.2e-21 106.7 141 44.0
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.4e-20 105.5 175 40.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-20 105.1 135 40.0
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 2.9e-18 97.8 100 54.0
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 1.9e-17 95.1 194 36.1
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 7.8e-16 89.7 68 66.2
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-15 89.0 149 36.2
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 8.7e-15 86.3 83 56.6
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 4.3e-14 84.0 169 37.3
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.6e-13 82.0 358 34.9
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.4e-12 78.2 48 75.0
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.0e-11 75.1 118 37.3
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 2.0e-11 75.1 210 26.2
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 9.9e-11 72.8 45 80.0
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 2.4e-09 68.2 293 23.9
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 5.4e-09 67.0 80 42.5
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 9.3e-09 66.2 123 35.0
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.6e-08 63.9 42 73.8
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 3.0e-07 61.2 48 56.2
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 3.0e-07 61.2 48 56.2
arahy.Tifrunner.gnm1.ann1.ZN5I3T Arachis hypogaea HOM05D000189 ORTHO05D007954 1.5e-06 58.9 59 45.8
arahy.Tifrunner.gnm1.ann1.N9UN2I Arachis hypogaea HOM05D000138 ORTHO05D000078 1.9e-06 58.5 48 54.2
arahy.Tifrunner.gnm1.ann1.2ASK5S Arachis hypogaea HOM05D000068 ORTHO05D026879 2.5e-06 58.2 49 53.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (9 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings