Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.1e-90 337.0 235 100.0
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 3.3e-90 335.5 235 89.8
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 7.5e-42 174.9 242 49.6
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.2e-34 151.0 231 45.5
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 9.8e-34 147.9 203 47.8
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 4.8e-33 145.6 195 49.2
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 6.3e-33 145.2 230 46.5
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.4e-32 143.3 194 47.4
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 3.1e-32 142.9 191 48.2
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 4.1e-32 142.5 194 47.4
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 7.0e-32 141.7 159 57.9
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.6e-31 140.6 198 45.5
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.6e-31 140.6 227 43.6
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.7e-31 139.8 192 47.4
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 3.5e-31 139.4 224 43.3
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 4.5e-31 139.0 180 46.7
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 5.9e-31 138.7 227 44.5
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 7.7e-31 138.3 155 58.7
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 7.7e-31 138.3 227 44.5
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.3e-30 137.5 239 42.3
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 1.7e-30 137.1 222 45.0
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.7e-30 137.1 227 43.2
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 2.2e-30 136.7 237 42.6
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 2.2e-30 136.7 209 43.1
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 2.2e-30 136.7 194 47.9
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 5.0e-30 135.6 193 45.6
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 6.5e-30 135.2 200 43.5
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 8.5e-30 134.8 212 41.0
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.9e-29 133.7 190 48.4
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 1.9e-29 133.7 218 42.7
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 2.5e-29 133.3 187 44.9
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 4.2e-29 132.5 189 46.0
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 7.2e-29 131.7 190 45.3
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 9.5e-29 131.3 210 43.3
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 1.2e-28 131.0 195 45.6
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 1.6e-28 130.6 168 55.4
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.6e-28 130.6 233 40.3
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.6e-28 130.6 217 41.5
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.1e-28 130.2 212 43.4
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 2.1e-28 130.2 195 44.6
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 2.7e-28 129.8 192 43.2
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.7e-28 129.8 195 48.2
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.6e-28 129.4 226 42.0
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.6e-28 129.4 202 44.1
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.7e-28 129.0 200 42.0
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 6.1e-28 128.6 192 47.9
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 8.0e-28 128.3 195 43.6
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.0e-27 127.9 192 45.8
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.0e-27 127.9 194 42.8
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.0e-27 127.9 154 51.3
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.4e-27 127.5 190 46.3
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 1.8e-27 127.1 195 42.6
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 2.3e-27 126.7 263 37.3
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 3.0e-27 126.3 192 55.2
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 5.2e-27 125.6 191 42.9
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.2e-27 125.6 222 38.7
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 5.2e-27 125.6 234 41.9
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 8.8e-27 124.8 190 45.8
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 1.2e-26 124.4 154 50.6
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.5e-26 124.0 190 45.8
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 2.0e-26 123.6 196 42.3
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.0e-26 123.6 194 42.3
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 2.0e-26 123.6 190 43.7
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 2.6e-26 123.2 221 40.3
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 3.4e-26 122.9 163 48.5
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 3.4e-26 122.9 205 43.9
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 3.4e-26 122.9 239 39.7
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 5.7e-26 122.1 234 39.3
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 7.5e-26 121.7 197 42.1
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 1.7e-25 120.6 232 38.8
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 2.2e-25 120.2 233 40.3
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.2e-25 120.2 232 38.8
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 4.9e-25 119.0 234 40.2
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.4e-24 117.5 235 51.1
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.8e-24 117.1 157 49.7
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 3.1e-24 116.3 227 36.1
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 4.1e-24 115.9 227 35.7
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 4.1e-24 115.9 219 38.8
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 9.2e-24 114.8 225 38.2
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 9.2e-24 114.8 119 59.7
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 1.2e-23 114.4 152 48.0
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.2e-23 114.4 146 49.3
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 1.2e-23 114.4 119 59.7
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.2e-23 114.4 194 42.8
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 1.6e-23 114.0 225 39.1
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 2.7e-23 113.2 142 52.8
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 3.5e-23 112.8 117 59.0
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 3.5e-23 112.8 145 53.8
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 5.9e-23 112.1 192 42.2
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 5.9e-23 112.1 152 47.4
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 5.9e-23 112.1 227 36.1
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 7.7e-23 111.7 223 39.5
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 1.0e-22 111.3 253 35.6
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.0e-22 111.3 195 37.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 1.7e-22 110.5 162 50.6
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 2.3e-22 110.2 118 59.3
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 2.3e-22 110.2 118 59.3
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 2.3e-22 110.2 231 37.2
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 2.3e-22 110.2 217 39.2
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 2.9e-22 109.8 188 41.5
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 5.0e-22 109.0 118 56.8
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 6.6e-22 108.6 155 51.0
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 6.6e-22 108.6 117 58.1
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 6.6e-22 108.6 117 58.1
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 6.6e-22 108.6 155 51.0
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 8.6e-22 108.2 122 56.6
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 8.6e-22 108.2 122 56.6
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 8.6e-22 108.2 122 56.6
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.1e-21 107.8 217 39.2
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 1.5e-21 107.5 117 57.3
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 4.3e-21 105.9 195 39.5
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 5.6e-21 105.5 118 55.1
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 9.5e-21 104.8 119 54.6
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 1.2e-20 104.4 215 37.2
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.1e-20 103.6 114 56.1
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 2.8e-20 103.2 161 46.0
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 4.7e-20 102.4 164 45.7
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 4.7e-20 102.4 223 36.3
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 8.0e-20 101.7 223 36.3
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 1.8e-19 100.5 223 36.3
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 8.9e-19 98.2 143 49.7
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.2e-18 97.8 186 38.2
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.2e-17 93.6 195 37.9
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 8.3e-17 91.7 218 34.4
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 8.3e-17 91.7 155 43.2
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 3.2e-16 89.7 120 50.0
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 7.0e-16 88.6 65 80.0
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 5.9e-15 85.5 223 34.1
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.7e-14 84.0 108 53.7
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 3.0e-14 83.2 228 36.4
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 1.6e-12 77.4 67 70.1
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 6.2e-12 75.5 130 39.2
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.4e-11 74.3 74 55.4
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 8.9e-11 71.6 90 47.8
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 8.9e-11 71.6 97 49.5
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 1.5e-10 70.9 278 36.7
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.4e-08 64.3 78 48.7
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 2.4e-08 63.5 105 39.0
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 7.8e-07 58.5 118 35.6

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (4 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (3 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings