Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 5.8e-147 524.2 273 100.0
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 6.2e-56 221.9 278 47.8
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 8.1e-56 221.5 268 50.7
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 8.1e-56 221.5 269 49.4
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 8.9e-55 218.0 264 50.4
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.2e-54 217.6 268 49.3
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.6e-54 216.5 268 48.1
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 5.8e-54 215.3 262 48.9
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.3e-53 214.2 268 47.8
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 4.9e-53 212.2 269 49.8
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 6.4e-53 211.8 270 48.9
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 6.0e-51 205.3 271 47.6
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 7.8e-51 204.9 269 48.3
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.7e-50 203.8 271 46.9
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 2.3e-50 203.4 271 46.1
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 3.9e-50 202.6 265 47.5
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 6.6e-50 201.8 269 48.3
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.5e-49 200.7 262 47.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 1.5e-49 200.7 265 47.9
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 4.3e-49 199.1 266 47.4
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 5.6e-49 198.7 271 46.5
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.6e-48 197.2 264 45.5
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 2.1e-48 196.8 271 47.6
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 2.4e-47 193.4 261 48.7
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 8.9e-47 191.4 271 45.8
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 3.4e-46 189.5 274 44.9
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 4.4e-46 189.1 271 42.4
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 7.6e-46 188.3 276 46.4
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 7.6e-46 188.3 276 46.4
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 9.9e-46 188.0 274 46.0
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.7e-45 187.2 275 44.4
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.9e-45 186.4 276 45.7
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 1.4e-44 184.1 180 57.8
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 4.2e-44 182.6 278 43.5
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 4.2e-44 182.6 267 44.2
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.6e-43 180.6 273 44.7
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 3.5e-43 179.5 265 44.2
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 7.8e-43 178.3 267 44.2
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.7e-42 177.2 176 57.4
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 2.3e-42 176.8 265 42.6
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 3.0e-42 176.4 274 44.5
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.1e-41 174.5 277 43.3
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 2.5e-41 173.3 170 57.1
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 3.3e-41 172.9 267 41.6
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 4.3e-41 172.6 280 45.4
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 9.6e-41 171.4 266 42.1
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 9.6e-41 171.4 266 42.5
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.3e-40 171.0 274 42.7
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.6e-40 170.6 274 42.7
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.6e-40 170.6 267 40.8
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 2.1e-40 170.2 266 41.4
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.6e-40 169.5 266 42.9
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 4.8e-40 169.1 266 39.8
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 4.8e-40 169.1 268 41.4
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.2e-40 168.7 269 43.5
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.1e-39 167.9 269 40.5
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.1e-39 167.9 266 40.2
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.1e-39 167.9 273 43.2
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.4e-39 167.5 271 40.6
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.8e-39 167.2 268 42.2
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 1.8e-39 167.2 274 42.0
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 2.4e-39 166.8 179 54.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.3e-39 165.6 270 40.4
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 6.9e-39 165.2 270 40.7
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 9.0e-39 164.9 267 40.8
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 2.6e-38 163.3 265 40.0
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 3.4e-38 162.9 267 41.2
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 4.4e-38 162.5 261 39.8
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.4e-38 162.5 268 41.0
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 9.9e-38 161.4 286 38.5
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.2e-37 160.2 269 42.0
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.9e-37 159.8 266 40.6
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 4.9e-37 159.1 267 37.5
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 6.4e-37 158.7 264 40.2
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 6.4e-37 158.7 271 39.5
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 8.4e-37 158.3 263 39.9
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.4e-36 157.5 269 40.5
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 2.4e-36 156.8 265 39.2
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 3.2e-36 156.4 264 39.4
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 4.2e-36 156.0 265 39.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 5.4e-36 155.6 269 40.5
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 5.4e-36 155.6 270 39.6
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.2e-35 154.5 271 39.5
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.3e-34 151.0 166 53.6
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.7e-34 150.6 282 37.2
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.3e-34 150.2 271 39.1
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 3.9e-34 149.4 127 62.2
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 9.6e-33 144.8 268 38.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.6e-32 144.1 179 49.2
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 2.8e-32 143.3 132 56.8
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 4.8e-32 142.5 146 52.7
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 4.8e-32 142.5 186 43.5
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.1e-31 141.4 129 56.6
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 2.4e-31 140.2 134 56.7
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 3.1e-31 139.8 180 44.4
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 5.4e-28 129.0 288 35.8
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 5.4e-28 129.0 130 52.3
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 7.1e-28 128.6 140 50.7
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.7e-27 126.7 268 36.6
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 2.7e-27 126.7 270 35.2
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 8.7e-26 121.7 276 34.1
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.1e-25 121.3 276 34.1
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 1.5e-25 120.9 123 52.8
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 9.6e-25 118.2 140 48.6
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.1e-23 114.8 118 53.4
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.2e-22 111.3 215 40.0
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 2.0e-22 110.5 121 50.4
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 8.2e-16 88.6 53 77.4
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 2.0e-14 84.0 159 38.4
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.5e-12 77.0 173 32.9
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.2e-12 76.6 170 31.8
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 5.7e-09 65.9 99 41.4
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 7.4e-09 65.5 166 36.7
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 1.3e-08 64.7 79 41.8
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 2.8e-08 63.5 49 65.3
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 6.3e-08 62.4 112 36.6
Solyc07g049360.3 Solanum lycopersicum HOM05D000984 ORTHO05D001096 6.3e-08 62.4 85 36.5
Sopen07g024700 Solanum pennellii HOM05D000984 ORTHO05D001096 6.3e-08 62.4 85 36.5
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 8.2e-08 62.0 82 42.7
PGSC0003DMG400000665 Solanum tuberosum HOM05D000984 ORTHO05D001096 2.4e-07 60.5 85 34.1
Cc05_g02960 Coffea canephora HOM05D000984 ORTHO05D001096 4.1e-07 59.7 86 37.2
FvH4_2g18770 Fragaria vesca HOM05D000984 ORTHO05D001096 6.9e-07 58.9 82 36.6
FAN15G0792 Fragaria x ananassa HOM05D000984 ORTHO05D001096 6.9e-07 58.9 82 36.6
FAN24G1775 Fragaria x ananassa HOM05D000984 ORTHO05D001096 6.9e-07 58.9 82 36.6
FAN27G3469 Fragaria x ananassa HOM05D000984 ORTHO05D001096 6.9e-07 58.9 82 36.6
RcHm_v2.0_Chr6g0284511 Rosa chinensis HOM05D000984 ORTHO05D001096 6.9e-07 58.9 82 36.6
CAN.G1493.2 Capsicum annuum HOM05D000984 ORTHO05D001096 2.0e-06 57.4 86 36.0
Dinv39748 Davidia involucrata HOM05D000984 ORTHO05D001096 2.0e-06 57.4 84 34.5
THA.LOC104818963 Tarenaya hassleriana HOM05D000984 ORTHO05D001096 2.0e-06 57.4 82 35.4
THA.LOC104818964 Tarenaya hassleriana HOM05D000984 ORTHO05D001096 2.0e-06 57.4 82 35.4
Dinv08721 Davidia involucrata HOM05D000984 ORTHO05D001096 3.4e-06 56.6 84 34.5
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 4.5e-06 56.2 96 30.2
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 4.5e-06 56.2 105 26.7
Lalb_Chr10g0105621 Lupinus albus HOM05D000984 ORTHO05D001096 4.5e-06 56.2 81 35.8
Carub.0008s1621 Capsella rubella HOM05D000984 ORTHO05D001096 5.9e-06 55.8 88 37.5
Hma1.2p1_0445F.1_g154350 Hydrangea macrophylla HOM05D000984 ORTHO05D001096 5.9e-06 55.8 84 33.3
Peaxi162Scf00921g00247 Petunia axillaris HOM05D000984 ORTHO05D001096 5.9e-06 55.8 83 37.3
MELO3C014183.2 Cucumis melo HOM05D000984 ORTHO05D001096 7.7e-06 55.5 80 35.0
CsaV3_3G004860 Cucumis sativus L. HOM05D000984 ORTHO05D001096 7.7e-06 55.5 80 35.0
Sc06g0009650 Simmondsia chinensis HOM05D000984 ORTHO05D001096 7.7e-06 55.5 84 36.9
vmacro09359 Vaccinium macrocarpon HOM05D000984 ORTHO05D001096 7.7e-06 55.5 84 34.5
CARHR269230 Cardamine hirsuta HOM05D000984 ORTHO05D001096 1.0e-05 55.1 85 36.5
Cfa013584 Carpinus fangiana HOM05D000984 ORTHO05D001096 1.0e-05 55.1 80 33.8
MD05G1173700 Malus domestica HOM05D000984 ORTHO05D001096 1.0e-05 55.1 91 34.1

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (3 genes)
Daucus carota (3 genes)
Davidia involucrata (3 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (8 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings