Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003590 Simmondsia chinensis HOM05D003587 ORTHO05D004139 7.3e-147 523.9 262 100.0
Actinidia07008 Actinidia chinensis HOM05D003587 ORTHO05D004139 4.4e-59 232.3 219 59.4
Cfa010158 Carpinus fangiana HOM05D003587 ORTHO05D004139 4.4e-59 232.3 233 56.7
AUR62006588 Chenopodium quinoa HOM05D003587 ORTHO05D004139 4.8e-58 228.8 221 59.3
CSS0013509 Camellia sinensis var. sinensis HOM05D003587 ORTHO05D004139 6.3e-58 228.4 225 57.3
Duzib150G0536 Durio zibethinus HOM05D003587 ORTHO05D004139 6.3e-58 228.4 219 58.4
Rhsim13G0203000 Rhododendron simsii HOM05D003587 ORTHO05D004139 8.3e-58 228.0 229 57.2
COL.COLO4_00327 Corchorus olitorius HOM05D003587 ORTHO05D004139 3.1e-57 226.1 219 58.0
CsaV3_1G041910 Cucumis sativus L. HOM05D003587 ORTHO05D004139 3.1e-57 226.1 219 56.2
GSVIVG01037380001 Vitis vinifera HOM05D003587 ORTHO05D004139 3.1e-57 226.1 219 56.2
Dinv35888 Davidia involucrata HOM05D003587 ORTHO05D004139 1.2e-56 224.2 215 59.1
Manes.02G134100 Manihot esculenta HOM05D003587 ORTHO05D004139 1.2e-56 224.2 219 58.9
Gohir.A09G109701 Gossypium hirsutum HOM05D003587 ORTHO05D004139 1.6e-56 223.8 220 57.7
Ah.06g194980 Amaranthus hybridus HOM05D003587 ORTHO05D004139 2.0e-56 223.4 242 55.4
Thecc.09G250900 Theobroma cacao HOM05D003587 ORTHO05D004139 2.0e-56 223.4 219 57.5
Potri.001G224950 Populus trichocarpa HOM05D003587 ORTHO05D004139 3.5e-56 222.6 219 57.1
Sed0023945 Sechium edule HOM05D003587 ORTHO05D004139 3.5e-56 222.6 219 55.7
Sabra16G0133600 Salix brachista HOM05D003587 ORTHO05D004139 4.5e-56 222.2 233 54.5
PGSC0003DMG400027414 Solanum tuberosum HOM05D003587 ORTHO05D004139 5.9e-56 221.9 219 56.2
MSTRG.21324 Avicennia marina HOM05D003587 ORTHO05D004139 1.3e-55 220.7 219 54.8
CAN.G1085.3 Capsicum annuum HOM05D003587 ORTHO05D004139 1.3e-55 220.7 219 56.6
CDE02G1319 Ceratophyllum demersum HOM05D003587 ORTHO05D004139 1.3e-55 220.7 233 52.8
ECA233G3436 Erigeron canadensis HOM05D003587 ORTHO05D000001 1.7e-55 220.3 219 56.2
THA.LOC104811210 Tarenaya hassleriana HOM05D003587 ORTHO05D004139 1.7e-55 220.3 219 55.7
CANSAT54G0304 Cannabis sativa HOM05D003587 ORTHO05D004139 2.3e-55 219.9 219 56.6
Ciclev10018028m.g Citrus clementina HOM05D003587 ORTHO05D004139 2.3e-55 219.9 233 54.5
Gohir.D09G106200 Gossypium hirsutum HOM05D003587 ORTHO05D004139 2.3e-55 219.9 220 56.8
Gorai.006G123700 Gossypium raimondii HOM05D003587 ORTHO05D004139 2.3e-55 219.9 220 56.8
PSO357G0695 Papaver somniferum HOM05D003587 ORTHO05D004139 5.0e-55 218.8 233 53.2
TWI59G0614 Tripterygium wilfordii HOM05D003587 ORTHO05D004139 8.6e-55 218.0 220 57.3
Hund07482 Selenicereus undatus HOM05D003587 ORTHO05D004139 1.1e-54 217.6 219 57.1
CiPaw.13G146000 Carya illinoinensis HOM05D003587 ORTHO05D004139 2.5e-54 216.5 233 53.6
Prupe.4G269300 Prunus persica HOM05D003587 ORTHO05D004139 4.2e-54 215.7 219 55.7
Solyc11g072170.2 Solanum lycopersicum HOM05D003587 ORTHO05D004139 1.6e-53 213.8 225 54.2
Eucgr.B03764 Eucalyptus grandis HOM05D003587 ORTHO05D004139 3.6e-53 212.6 219 53.4
Hma1.2p1_1632F.1_g294660 Hydrangea macrophylla HOM05D003587 ORTHO05D004139 6.1e-53 211.8 219 56.2
Nn2g14595 Nelumbo nucifera HOM05D003587 ORTHO05D004139 6.1e-53 211.8 233 51.5
SalBow6G4759 Salvia bowleyana HOM05D003587 ORTHO05D004139 1.0e-52 211.1 219 54.3
TPR.G16429 Trifolium pratense HOM05D003587 ORTHO05D004139 1.4e-52 210.7 228 52.6
HanXRQChr12g0378151 Helianthus annuus HOM05D003587 ORTHO05D004139 5.2e-52 208.8 219 54.3
TAR623G1513 Trochodendron aralioides HOM05D003587 ORTHO05D004139 1.5e-51 207.2 219 52.5
Medtr5g088730 Medicago truncatula HOM05D003587 ORTHO05D004139 3.4e-51 206.1 219 53.0
AL6G31010 Arabidopsis lyrata HOM05D003587 ORTHO05D004139 4.4e-51 205.7 217 54.4
LjContig00564g0003567 Lotus japonicus HOM05D003587 ORTHO05D004139 4.4e-51 205.7 219 53.0
Aqoxy1G00052 Aquilegia oxysepala HOM05D003587 ORTHO05D004139 1.3e-50 204.1 233 49.4
Carub.0006s1785 Capsella rubella HOM05D003587 ORTHO05D004139 1.3e-50 204.1 220 54.1
Lalb_Chr10g0106041 Lupinus albus HOM05D003587 ORTHO05D004139 2.8e-50 203.0 222 53.6
Ca_06175_v3 Cicer arietinum L. HOM05D003587 ORTHO05D004139 4.9e-50 202.2 219 51.1
Psat0s2703g0240 Pisum sativum HOM05D003587 ORTHO05D004139 4.9e-50 202.2 229 51.1
Thhalv10013310m.g Eutrema salsugineum HOM05D003587 ORTHO05D004139 6.3e-50 201.8 229 52.0
AT5G19500 Arabidopsis thaliana HOM05D003587 ORTHO05D004139 8.3e-50 201.4 217 53.5
arahy.Tifrunner.gnm1.ann1.Y38JVD Arachis hypogaea HOM05D003587 ORTHO05D004139 1.4e-49 200.7 221 55.7
A02p05580 Brassica napus HOM05D003587 ORTHO05D004139 1.4e-49 200.7 216 52.3
BraA02t05510Z Brassica rapa HOM05D003587 ORTHO05D004139 1.4e-49 200.7 216 52.3
BcaC03g13680 Brassica carinata HOM05D003587 ORTHO05D004139 1.8e-49 200.3 216 52.3
BolC2t06958H Brassica oleracea HOM05D003587 ORTHO05D004139 1.8e-49 200.3 216 52.3
Sp6g24900 Schrenkiella parvula HOM05D003587 ORTHO05D004139 3.2e-49 199.5 216 53.2
HPP92_001660 Vanilla planifolia HOM05D003587 ORTHO05D004139 4.1e-49 199.1 219 52.1
Cc01_g07130 Coffea canephora HOM05D003587 ORTHO05D004139 7.0e-49 198.4 219 51.6
BcaB05g23382 Brassica carinata HOM05D003587 ORTHO05D004139 1.6e-48 197.2 216 51.9
CARHR193400 Cardamine hirsuta HOM05D003587 ORTHO05D004139 4.5e-48 195.7 212 53.8
Aa31LG1G8880 Aethionema arabicum HOM05D003587 ORTHO05D004139 5.9e-48 195.3 234 50.0
RcHm_v2.0_Chr5g0050121 Rosa chinensis HOM05D003587 ORTHO05D004139 2.3e-47 193.4 219 52.1
Oeu025946.1 Olea europaea HOM05D003587 ORTHO05D004139 2.9e-47 193.0 159 65.4
FvH4_3g27580 Fragaria vesca HOM05D003587 ORTHO05D004139 8.6e-47 191.4 216 52.3
unitig_0.g312 Utricularia gibba HOM05D003587 ORTHO05D004139 3.3e-46 189.5 219 49.8
BNapus_Darmor_BZH_scaffold_38p02370 Brassica napus HOM05D003587 ORTHO05D004139 2.8e-45 186.4 241 46.9
Zm00001eb329970 Zea mays HOM05D003587 ORTHO05D004139 9.8e-43 177.9 201 51.2
Lsat_1_v5_gn_5_64961 Lactuca sativa HOM05D003587 ORTHO05D004139 6.4e-42 175.3 219 49.8
Migut.D00702 Erythranthe guttata HOM05D003587 ORTHO05D004139 8.3e-42 174.9 178 53.4
Mapoly0007s0093 Marchantia polymorpha HOM05D003587 ORTHO05D004139 1.0e-39 167.9 222 45.9
SMO115G0099 Selaginella moellendorffii HOM05D003587 ORTHO05D004139 6.6e-39 165.2 233 43.3
SMO115G0193 Selaginella moellendorffii HOM05D003587 ORTHO05D004139 6.6e-39 165.2 233 43.3
Pp3c11_25650 Physcomitrium patens HOM05D003587 ORTHO05D004139 2.5e-38 163.3 236 44.5
vmacro04091 Vaccinium macrocarpon HOM05D003587 ORTHO05D004139 2.0e-35 153.7 401 32.4
MD03G1163300 Malus domestica HOM05D003587 ORTHO05D004139 1.7e-34 150.6 173 49.7
ATR0782G174 Amborella trichopoda HOM05D003587 ORTHO05D004139 6.6e-31 138.7 187 42.8
AagrBONN_evm.TU.Sc2ySwM_344.2860 Anthoceros agrestis HOM05D003587 ORTHO05D004139 2.8e-29 133.3 222 39.6
Peaxi162Scf00234g00315 Petunia axillaris HOM05D003587 ORTHO05D004139 6.2e-29 132.1 225 42.2
EL10Ac4g10057 Beta vulgaris HOM05D003587 ORTHO05D004139 1.4e-28 131.0 232 41.8
ClCG03G014310 Citrullus lanatus HOM05D003587 ORTHO05D004139 4.4e-27 125.9 236 39.4
AUR62000241 Chenopodium quinoa HOM05D003587 ORTHO05D004139 3.7e-26 122.9 219 39.7
Nitab4.5_0002161g0020 Nicotiana tabacum HOM05D003587 ORTHO05D004139 3.0e-23 113.2 229 37.1
Lj2A826G17 Lonicera japonica HOM05D003587 ORTHO05D004139 8.6e-23 111.7 74 77.0
Nitab4.5_0002567g0150 Nicotiana tabacum HOM05D003587 ORTHO05D004139 7.3e-22 108.6 225 36.9
Sopen11g029820 Solanum pennellii HOM05D003587 ORTHO05D004139 9.6e-22 108.2 74 73.0
MCO13G640 Micromonas commoda HOM05D003587 ORTHO05D004139 2.1e-16 90.5 225 29.8
PRCOL_00002329 Prasinoderma coloniale HOM05D003587 ORTHO05D004139 2.3e-15 87.0 139 36.0
Cre13.g572200 Chlamydomonas reinhardtii HOM05D003587 ORTHO05D004139 1.9e-14 84.0 131 37.4
QL01p020717 Quercus lobata HOM05D003587 ORTHO05D004139 4.8e-13 79.3 158 38.0
Cpa.g.sc34.195 Carica papaya HOM05D003587 ORTHO05D004139 7.1e-09 65.5 45 77.8
SEGI_26742 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 9.3e-09 65.1 148 33.1
SEGI_29926 Sequoiadendron giganteum HOM05D003587 ORTHO05D004139 9.3e-09 65.1 148 33.1
QL01p000796 Quercus lobata HOM05D003587 ORTHO05D004139 1.6e-08 64.3 45 66.7
Aqoxy3G02282_Aqoxy3G02283 Aquilegia oxysepala HOM05D003587 ORTHO05D004139 2.7e-08 63.5 228 30.3
MD03G1163200 Malus domestica HOM05D003587 ORTHO05D004139 4.6e-08 62.8 46 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3870 Anthoceros agrestis HOM05D003587 ORTHO05D004139 1.0e-07 61.6 147 28.6
Lj2A826G18 Lonicera japonica HOM05D003587 ORTHO05D004139 1.3e-07 61.2 101 36.6
Cfa021506 Carpinus fangiana HOM05D003587 ORTHO05D004139 2.3e-07 60.5 223 25.1
CDE05G3302 Ceratophyllum demersum HOM05D003587 ORTHO05D004139 3.0e-07 60.1 152 30.3
Lalb_Chr19g0129681 Lupinus albus HOM05D003587 ORTHO05D004139 6.6e-07 58.9 134 29.9
FAN25G2256 Fragaria x ananassa HOM05D003587 ORTHO05D004139 1.9e-06 57.4 88 47.7
Glyma.16G154700 Glycine max HOM05D003587 ORTHO05D004139 3.3e-06 56.6 223 26.0
Hma1.2p1_1004F.1_g246830 Hydrangea macrophylla HOM05D003587 ORTHO05D004139 4.3e-06 56.2 226 23.5
arahy.Tifrunner.gnm1.ann1.TJZR4S Arachis hypogaea HOM05D003587 ORTHO05D004139 9.6e-06 55.1 223 25.1
Gohir.D13G022900 Gossypium hirsutum HOM05D003587 ORTHO05D004139 9.6e-06 55.1 216 24.1

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (1 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings