Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.3e-166 589.7 305 100.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.1e-66 257.7 200 66.0
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.9e-64 248.4 211 62.6
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.3e-62 244.2 235 58.3
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.9e-62 243.0 235 57.9
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.6e-60 237.3 225 57.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.3e-59 234.2 239 54.4
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.5e-58 230.7 231 55.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.5e-58 230.7 233 55.4
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.1e-56 224.6 230 54.8
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.4e-56 223.4 225 54.7
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.4e-56 223.4 225 56.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.1e-56 223.0 235 52.8
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.0e-56 222.6 230 55.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 5.3e-56 222.2 235 52.8
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 9.0e-56 221.5 235 52.3
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.5e-55 220.7 225 53.8
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.5e-55 220.7 201 61.2
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.0e-55 220.3 232 53.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.6e-55 219.9 236 53.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.4e-55 219.5 211 55.0
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 4.5e-55 219.2 242 52.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.8e-55 218.8 240 52.5
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 7.6e-55 218.4 185 61.1
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.7e-54 217.2 239 50.6
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.2e-54 216.9 209 56.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 2.2e-54 216.9 230 51.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.5e-53 213.4 207 55.6
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 3.2e-53 213.0 210 55.7
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-52 211.1 210 55.2
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.2e-52 211.1 215 53.0
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.1e-52 210.3 210 56.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 4.6e-52 209.1 235 51.9
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 6.0e-52 208.8 236 50.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 6.0e-52 208.8 236 50.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 6.0e-52 208.8 232 50.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 7.9e-52 208.4 225 50.7
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.3e-51 207.6 210 55.2
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.3e-51 207.6 233 49.4
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 3.9e-51 206.1 210 53.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.9e-51 206.1 220 52.3
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.7e-51 204.9 230 52.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 8.7e-51 204.9 239 52.7
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.5e-50 204.1 237 48.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.9e-50 203.8 254 47.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 2.5e-50 203.4 225 52.0
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.3e-50 203.0 220 50.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.3e-50 203.0 214 50.9
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-50 203.0 240 51.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 4.3e-50 202.6 247 46.2
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.3e-50 202.6 223 52.5
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.7e-50 202.2 208 54.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.3e-49 201.1 242 47.5
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-49 200.7 240 50.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 4.8e-49 199.1 233 51.5
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.8e-49 199.1 203 55.2
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 4.8e-49 199.1 219 51.1
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 6.3e-49 198.7 244 49.2
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 8.2e-49 198.4 219 53.9
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 8.2e-49 198.4 214 54.7
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 8.2e-49 198.4 229 49.8
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.4e-48 197.6 217 52.1
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 3.1e-48 196.4 235 51.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 4.1e-48 196.1 236 50.4
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 4.1e-48 196.1 223 52.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-47 194.5 231 53.2
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.5e-47 194.1 231 51.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.5e-47 194.1 225 52.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.5e-47 194.1 219 52.1
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.0e-47 193.7 319 41.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.0e-46 191.4 210 51.4
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.3e-46 191.0 214 50.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.2e-46 190.3 237 46.8
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 3.8e-46 189.5 217 50.2
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 3.8e-46 189.5 229 51.5
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 8.5e-46 188.3 211 48.8
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 8.5e-46 188.3 229 51.1
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.1e-45 188.0 234 51.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.2e-45 186.4 234 49.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.2e-44 184.5 219 51.1
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.1e-44 183.7 255 43.5
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.7e-44 183.3 230 50.0
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.7e-44 183.3 210 51.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.0e-43 179.9 227 49.3
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 3.9e-43 179.5 215 47.9
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 8.7e-43 178.3 210 50.0
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.2e-41 173.7 236 44.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.5e-39 167.5 202 49.5
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.4e-37 161.0 237 44.3
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 4.2e-37 159.5 210 44.8
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.0e-35 153.3 273 40.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.9e-32 142.1 216 41.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 2.0e-31 140.6 174 48.3
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.9e-31 139.0 135 57.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 8.5e-30 135.2 272 33.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-29 134.4 154 51.9
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 4.4e-26 122.9 261 32.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 7.7e-23 112.1 234 35.0
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.9e-22 110.2 140 47.1
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 3.2e-21 106.7 165 44.2
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 2.7e-20 103.6 118 51.7
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.6e-18 97.1 68 67.6
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.6e-18 97.1 81 61.7
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 3.3e-18 96.7 268 26.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 7.5e-18 95.5 255 27.1
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 8.2e-17 92.0 69 68.1
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 9.4e-13 78.6 38 86.8
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.6e-12 77.8 52 67.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.7e-12 77.0 158 39.9
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-11 75.1 40 80.0
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-10 71.6 49 71.4
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 4.4e-10 69.7 64 46.9
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 9.8e-10 68.6 42 69.0
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 8.3e-09 65.5 57 50.9
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-06 58.2 45 57.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (4 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (4 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings