Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.2e-183 646.4 332 100.0
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.4e-179 630.9 330 97.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 3.3e-168 595.1 326 92.0
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.3e-168 595.1 325 93.2
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 5.6e-168 594.3 332 91.0
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 9.5e-168 593.6 326 91.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 2.1e-167 592.4 330 91.5
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.8e-167 592.0 330 91.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.0e-166 590.1 326 91.1
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.4e-166 589.7 330 91.2
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 8.9e-166 587.0 332 90.7
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.2e-165 586.6 327 90.8
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 3.4e-165 585.1 326 90.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 4.4e-165 584.7 332 89.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 9.8e-165 583.6 332 88.9
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 9.8e-165 583.6 327 91.1
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.2e-164 582.4 325 92.0
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.2e-164 582.4 325 92.0
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 2.9e-164 582.0 327 90.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 4.9e-164 581.3 330 89.1
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 4.9e-164 581.3 326 90.5
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 6.4e-164 580.9 326 90.5
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 7.0e-163 577.4 330 90.3
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.7e-162 575.5 326 89.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 4.6e-162 574.7 326 89.0
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.9e-161 571.6 328 88.4
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 6.6e-161 570.9 330 87.9
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 8.6e-161 570.5 328 88.1
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.5e-160 569.7 330 86.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.3e-160 568.5 326 87.7
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 4.3e-160 568.2 330 87.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.3e-160 568.2 328 87.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 5.6e-160 567.8 330 86.7
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 7.3e-160 567.4 329 86.9
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 7.3e-160 567.4 330 87.3
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-159 566.6 330 87.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.2e-159 566.6 326 87.7
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-159 565.5 330 88.5
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.6e-159 565.1 330 85.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.6e-159 565.1 332 86.7
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.6e-159 565.1 326 88.0
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 6.2e-159 564.3 326 86.5
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 1.1e-158 563.5 328 85.7
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.1e-158 563.5 330 86.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.1e-158 563.5 326 87.7
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 1.4e-158 563.1 326 88.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.8e-158 562.8 330 84.8
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 2.3e-158 562.4 325 87.7
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 2.3e-158 562.4 330 84.5
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-158 562.0 325 86.2
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 4.0e-158 561.6 363 82.4
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.2e-158 561.2 331 84.6
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 5.2e-158 561.2 330 84.5
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 6.8e-158 560.8 336 86.0
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.5e-157 559.7 330 85.2
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.5e-157 559.7 330 85.2
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.5e-157 559.7 380 78.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.0e-157 559.3 325 87.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.0e-157 559.3 325 87.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.4e-157 558.5 324 88.9
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.4e-157 558.5 330 84.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.5e-157 557.4 331 84.3
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 9.9e-157 557.0 330 84.5
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 9.9e-157 557.0 330 84.8
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.3e-156 556.6 326 85.6
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.3e-156 556.6 330 84.5
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 85.8
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.7e-156 556.2 331 84.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.7e-156 556.2 329 86.3
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.2e-156 555.8 331 84.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 3.7e-156 555.1 326 85.3
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 4.9e-156 554.7 326 85.3
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 326 85.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 326 85.0
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 85.0
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 85.0
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 85.0
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 1.4e-155 553.1 326 85.0
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.9e-155 552.7 330 84.2
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 2.4e-155 552.4 330 83.9
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 84.4
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 84.7
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.2e-154 550.1 357 79.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.6e-154 549.7 332 83.4
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 2.3e-153 545.8 330 83.6
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 2.3e-153 545.8 330 83.3
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.9e-152 542.7 454 66.5
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.5e-152 542.3 314 86.0
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 4.3e-152 541.6 328 83.2
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 4.3e-152 541.6 327 83.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.2e-151 540.0 328 82.9
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 4.7e-151 538.1 326 83.1
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.3e-150 535.8 330 82.1
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.1e-150 535.4 330 82.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 8.4e-148 527.3 303 87.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 4.6e-146 521.5 327 82.0
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.5e-144 516.5 332 80.4
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 5.6e-144 514.6 326 81.9
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 7.3e-144 514.2 300 85.7
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 3.6e-143 511.9 330 82.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 4.0e-142 508.4 329 78.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 3.8e-140 501.9 330 78.2
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 5.1e-137 491.5 331 74.3
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 8.7e-137 490.7 330 79.1
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.8e-135 485.0 300 83.7
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.2e-135 484.6 376 69.9
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.1e-134 483.8 335 72.8
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.1e-134 482.3 331 77.3
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 3.4e-133 478.8 326 73.6
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 5.1e-129 464.9 331 74.6
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 9.6e-128 460.7 333 74.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 2.1e-127 459.5 279 82.8
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 2.6e-117 426.0 323 70.6
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.5e-114 415.6 234 88.9
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.8e-111 406.0 324 60.8
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.4e-110 402.9 318 63.5
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 7.6e-109 397.9 326 63.8
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-107 394.0 233 85.0
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.4e-104 381.3 318 65.1
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 5.3e-102 375.2 271 72.3
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 8.2e-95 351.3 197 90.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.1e-94 349.4 328 64.0
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 3.2e-91 339.3 227 76.2
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 8.0e-90 334.7 332 59.0
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 8.0e-90 334.7 239 69.9
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 9.7e-88 327.8 220 79.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 5.3e-86 322.0 220 77.3
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 6.1e-82 308.5 220 75.9
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.0e-81 307.8 167 91.6
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 6.5e-76 288.5 333 45.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 3.7e-71 272.7 163 85.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.7e-69 266.5 163 81.6
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.7e-68 263.8 326 51.2
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 4.0e-65 252.7 267 55.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.6e-61 240.7 130 92.3
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-56 224.2 129 88.4
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.1e-43 181.4 159 62.9
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 7.3e-43 178.7 207 50.7
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-42 177.9 102 84.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.2e-40 171.4 205 52.2
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-38 164.9 103 83.5
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.0e-36 156.8 90 88.9
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.5e-35 153.7 87 83.9
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.6e-32 142.1 77 93.5
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.7e-31 141.0 88 77.3
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-30 137.5 89 83.1
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 3.2e-30 136.7 74 89.2
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 2.1e-29 134.0 69 91.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 6.0e-29 132.5 80 80.0
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 7.3e-27 125.6 72 81.9
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 9.9e-24 115.2 75 74.7
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 2.2e-23 114.0 72 81.9
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 9.3e-22 108.6 69 78.3
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-21 108.2 65 86.2
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 9.6e-19 98.6 60 86.7
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.3e-11 73.6 85 52.9
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 9.9e-08 62.0 48 66.7
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.9e-07 60.5 76 44.7

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings