Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0108 Selaginella moellendorffii HOM05D005590 ORTHO05D007084 0.0e+00 1712.2 852 100.0
Pp3c24_5050 Physcomitrium patens HOM05D005590 ORTHO05D007084 0.0e+00 1268.8 857 72.7
PSO063G4664 Papaver somniferum HOM05D005590 ORTHO05D007084 0.0e+00 1224.9 858 69.8
Aqoxy5G03486 Aquilegia oxysepala HOM05D005590 ORTHO05D007084 0.0e+00 1221.5 858 69.7
Zm00001eb118150 Zea mays HOM05D005590 ORTHO05D007084 0.0e+00 1217.6 861 70.7
AagrBONN_evm.TU.Sc2ySwM_344.1264 Anthoceros agrestis HOM05D005590 ORTHO05D007084 0.0e+00 1213.4 841 71.5
TAR629G0528 Trochodendron aralioides HOM05D005590 ORTHO05D007084 0.0e+00 1210.7 858 69.6
CDE08G0401 Ceratophyllum demersum HOM05D005590 ORTHO05D007084 0.0e+00 1206.8 858 69.5
Nn4g22391 Nelumbo nucifera HOM05D005590 ORTHO05D007084 0.0e+00 1204.1 858 69.1
ECA234G4696 Erigeron canadensis HOM05D005590 ORTHO05D003891 0.0e+00 1199.9 858 68.6
AUR62024147 Chenopodium quinoa HOM05D005590 ORTHO05D007084 0.0e+00 1196.0 858 68.5
Gohir.D04G181700 Gossypium hirsutum HOM05D005590 ORTHO05D007084 0.0e+00 1196.0 859 69.3
CANSAT01G0321 Cannabis sativa HOM05D005590 ORTHO05D007084 0.0e+00 1194.1 858 69.1
PGR102G0567 Punica granatum HOM05D005590 ORTHO05D007084 0.0e+00 1193.3 860 69.9
SalBow2G1962 Salvia bowleyana HOM05D005590 ORTHO05D007084 0.0e+00 1193.3 858 69.3
QL03p054580 Quercus lobata HOM05D005590 ORTHO05D007084 0.0e+00 1191.8 857 69.3
SGA_v2.0_scaffold9G04769 Striga asiatica HOM05D005590 ORTHO05D007084 0.0e+00 1189.5 866 68.7
Gorai.012G175100 Gossypium raimondii HOM05D005590 ORTHO05D007084 0.0e+00 1189.1 859 69.0
Gohir.A04G138800 Gossypium hirsutum HOM05D005590 ORTHO05D007084 0.0e+00 1188.3 859 68.9
EL10Ac6g13455 Beta vulgaris HOM05D005590 ORTHO05D007084 0.0e+00 1187.2 858 68.2
CiPaw.05G113900 Carya illinoinensis HOM05D005590 ORTHO05D007084 0.0e+00 1186.8 858 68.6
MELO3C011884.2 Cucumis melo HOM05D005590 ORTHO05D007084 0.0e+00 1185.2 858 68.8
Migut.K00707 Erythranthe guttata HOM05D005590 ORTHO05D007084 0.0e+00 1183.7 858 68.4
GSVIVG01010360001 Vitis vinifera HOM05D005590 ORTHO05D007084 0.0e+00 1182.5 858 69.2
Cc11_g16690 Coffea canephora HOM05D005590 ORTHO05D007084 0.0e+00 1182.2 858 68.4
Cpa.g.sc43.29 Carica papaya HOM05D005590 ORTHO05D007084 0.0e+00 1181.8 858 67.8
Duzib248G1471 Durio zibethinus HOM05D005590 ORTHO05D007084 0.0e+00 1181.8 858 67.9
TPR.G21797 Trifolium pratense HOM05D005590 ORTHO05D007084 0.0e+00 1178.3 859 68.2
Ciclev10030703m.g Citrus clementina HOM05D005590 ORTHO05D007084 0.0e+00 1177.9 860 67.9
Manes.13G016500 Manihot esculenta HOM05D005590 ORTHO05D007084 0.0e+00 1177.2 858 68.2
MSTRG.7987 Avicennia marina HOM05D005590 ORTHO05D007084 0.0e+00 1176.4 858 68.1
CSS0010322 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 0.0e+00 1176.4 858 67.7
CsaV3_5G030450 Cucumis sativus L. HOM05D005590 ORTHO05D007084 0.0e+00 1175.6 858 68.1
Potri.008G177900 Populus trichocarpa HOM05D005590 ORTHO05D007084 0.0e+00 1173.7 858 68.6
Hma1.2p1_1954F.1_g308890 Hydrangea macrophylla HOM05D005590 ORTHO05D007084 0.0e+00 1172.1 857 68.3
Peaxi162Scf00128g00942 Petunia axillaris HOM05D005590 ORTHO05D007084 0.0e+00 1170.6 858 68.1
CSS0021341 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 0.0e+00 1169.5 858 67.2
Ah.03g133910 Amaranthus hybridus HOM05D005590 ORTHO05D007084 0.0e+00 1168.7 891 66.8
Lj6g0026097 Lotus japonicus HOM05D005590 ORTHO05D007084 0.0e+00 1168.3 860 69.0
Sopen05g010060 Solanum pennellii HOM05D005590 ORTHO05D007084 0.0e+00 1168.3 858 67.7
FvH4_4g24160 Fragaria vesca HOM05D005590 ORTHO05D007084 0.0e+00 1166.8 859 68.6
Thecc.02G275300 Theobroma cacao HOM05D005590 ORTHO05D007084 0.0e+00 1166.4 858 67.4
Actinidia33250 Actinidia chinensis HOM05D005590 ORTHO05D007084 0.0e+00 1165.6 850 67.9
Solyc05g014970.3 Solanum lycopersicum HOM05D005590 ORTHO05D007084 0.0e+00 1165.2 858 67.2
DCAR_031184 Daucus carota HOM05D005590 ORTHO05D007084 0.0e+00 1163.7 929 63.5
Prupe.1G232300 Prunus persica HOM05D005590 ORTHO05D007084 0.0e+00 1162.5 858 68.1
Glyma.11G248700 Glycine max HOM05D005590 ORTHO05D007084 0.0e+00 1162.1 859 68.6
Eucgr.B03469 Eucalyptus grandis HOM05D005590 ORTHO05D007084 0.0e+00 1161.7 858 67.8
Cfa009321 Carpinus fangiana HOM05D005590 ORTHO05D007084 0.0e+00 1160.6 888 66.9
BcaC03g14846 Brassica carinata HOM05D005590 ORTHO05D007084 0.0e+00 1159.4 859 67.5
BcaB05g24294 Brassica carinata HOM05D005590 ORTHO05D007084 0.0e+00 1158.3 858 67.2
Lalb_Chr19g0126761 Lupinus albus HOM05D005590 ORTHO05D007084 0.0e+00 1158.3 859 68.1
Oeu019045.1 Olea europaea HOM05D005590 ORTHO05D007084 0.0e+00 1157.5 863 67.4
Hund25444 Selenicereus undatus HOM05D005590 ORTHO05D007084 0.0e+00 1157.5 861 66.3
Dinv10985 Davidia involucrata HOM05D005590 ORTHO05D007084 0.0e+00 1157.1 847 67.5
AL2G26220 Arabidopsis lyrata HOM05D005590 ORTHO05D007084 0.0e+00 1154.4 858 67.5
Haze_12376 Corylus avellana HOM05D005590 ORTHO05D007084 0.0e+00 1154.4 878 67.1
Medtr3g085640 Medicago truncatula HOM05D005590 ORTHO05D007084 0.0e+00 1153.7 859 67.6
A02p14320 Brassica napus HOM05D005590 ORTHO05D007084 0.0e+00 1151.7 865 66.9
RcHm_v2.0_Chr4g0430931 Rosa chinensis HOM05D005590 ORTHO05D007084 0.0e+00 1151.7 858 67.8
Sp5g22560 Schrenkiella parvula HOM05D005590 ORTHO05D007084 0.0e+00 1151.0 858 66.9
AT1G67550 Arabidopsis thaliana HOM05D005590 ORTHO05D007084 0.0e+00 1150.6 859 67.5
Carub.0002s1389 Capsella rubella HOM05D005590 ORTHO05D007084 0.0e+00 1150.6 859 67.2
Mapoly0026s0042 Marchantia polymorpha HOM05D005590 ORTHO05D007084 0.0e+00 1150.6 865 67.2
Sed0016931 Sechium edule HOM05D005590 ORTHO05D007084 0.0e+00 1149.8 858 67.5
BraA02t06492Z Brassica rapa HOM05D005590 ORTHO05D007084 0.0e+00 1149.4 865 66.8
THA.LOC104807889 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 0.0e+00 1149.4 858 66.9
Glyma.05G146000 Glycine max HOM05D005590 ORTHO05D007084 0.0e+00 1147.5 860 67.6
BolC2t08460H Brassica oleracea HOM05D005590 ORTHO05D007084 0.0e+00 1147.1 865 66.7
Thhalv10018120m.g Eutrema salsugineum HOM05D005590 ORTHO05D007084 0.0e+00 1145.2 858 67.0
Rhsim12G0104500 Rhododendron simsii HOM05D005590 ORTHO05D007084 0.0e+00 1145.2 934 62.8
unitig_22.g6410 Utricularia gibba HOM05D005590 ORTHO05D007084 0.0e+00 1145.2 870 67.2
CBR_g46753 Chara braunii HOM05D005590 ORTHO05D007084 0.0e+00 1140.2 870 64.9
Phvul.001G260000 Phaseolus vulgaris HOM05D005590 ORTHO05D007084 0.0e+00 1139.4 859 67.6
CARHR060120 Cardamine hirsuta HOM05D005590 ORTHO05D007084 0.0e+00 1139.0 858 66.1
PSO782G2635 Papaver somniferum HOM05D005590 ORTHO05D007084 0.0e+00 1137.9 801 69.0
VMungo1383G1779 Vigna mungo HOM05D005590 ORTHO05D007084 0.0e+00 1133.6 859 66.6
TWI36G0819 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 0.0e+00 1132.5 858 66.2
TWI36G1126 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 0.0e+00 1132.5 858 66.2
AUR62005583 Chenopodium quinoa HOM05D005590 ORTHO05D007084 0.0e+00 1131.3 857 66.3
FAN07G0306 Fragaria x ananassa HOM05D005590 ORTHO05D007084 0.0e+00 1129.4 924 63.7
Lj6C823G8 Lonicera japonica HOM05D005590 ORTHO05D007084 0.0e+00 1129.0 878 64.6
vmacro16128 Vaccinium macrocarpon HOM05D005590 ORTHO05D007084 0.0e+00 1125.5 986 59.4
Sc11g0000610 Simmondsia chinensis HOM05D005590 ORTHO05D007084 0.0e+00 1122.8 784 70.2
FAN12G4158 Fragaria x ananassa HOM05D005590 ORTHO05D007084 0.0e+00 1119.0 931 62.8
ClCG11G013850 Citrullus lanatus HOM05D005590 ORTHO05D007084 0.0e+00 1115.1 836 67.2
HanXRQChr12g0385371 Helianthus annuus HOM05D005590 ORTHO05D007084 0.0e+00 1114.4 785 69.7
Lsat_1_v5_gn_4_2961 Lactuca sativa HOM05D005590 ORTHO05D007084 0.0e+00 1106.7 847 65.2
Sabra08G0135700 Salix brachista HOM05D005590 ORTHO05D007084 0.0e+00 1100.9 870 64.9
Aa31sc48G50 Aethionema arabicum HOM05D005590 ORTHO05D007084 0.0e+00 1095.9 843 66.4
arahy.Tifrunner.gnm1.ann1.F3MU0V Arachis hypogaea HOM05D005590 ORTHO05D007084 0.0e+00 1088.6 861 65.0
C02p23180 Brassica napus HOM05D005590 ORTHO05D007084 0.0e+00 1085.5 786 68.6
FAN22G2048 Fragaria x ananassa HOM05D005590 ORTHO05D007084 0.0e+00 1083.2 796 68.7
MCO04G019 Micromonas commoda HOM05D005590 ORTHO05D007084 0.0e+00 1079.7 872 63.4
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 5.2e-311 1070.8 860 62.8
Cfa009347 Carpinus fangiana HOM05D005590 ORTHO05D007084 1.1e-308 1063.1 772 68.5
arahy.Tifrunner.gnm1.ann1.T6FRZY Arachis hypogaea HOM05D005590 ORTHO05D007084 1.4e-308 1062.8 861 64.2
ATR0686G208 Amborella trichopoda HOM05D005590 ORTHO05D007084 3.5e-307 1058.1 852 63.6
SHI17943 Sapria himalayana HOM05D005590 ORTHO05D007084 4.3e-305 1051.2 808 65.2
COL.COLO4_12817 Corchorus olitorius HOM05D005590 ORTHO05D007084 8.3e-301 1036.9 858 62.1
Ca_16478_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 2.8e-296 1021.9 859 62.7
Sed0012865 Sechium edule HOM05D005590 ORTHO05D007084 3.2e-292 1008.4 768 65.2
Atru.chr11.2279 Acer truncatum HOM05D005590 ORTHO05D007084 8.1e-288 993.8 755 66.2
Nitab4.5_0003209g0020 Nicotiana tabacum HOM05D005590 ORTHO05D007084 2.1e-283 979.2 858 58.9
Psat5g098160 Pisum sativum HOM05D005590 ORTHO05D007084 2.0e-278 962.6 717 67.2
CAN.G1178.7 Capsicum annuum HOM05D005590 ORTHO05D007084 2.5e-265 919.1 674 68.2
Nitab4.5_0000240g0180 Nicotiana tabacum HOM05D005590 ORTHO05D007084 9.1e-239 830.9 864 52.8
Ca_29988_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 2.2e-216 756.5 661 61.1
HPP92_006206 Vanilla planifolia HOM05D005590 ORTHO05D007084 1.5e-212 743.8 561 65.1
PGSC0003DMG400001246 Solanum tuberosum HOM05D005590 ORTHO05D007084 2.7e-190 669.8 534 62.9
MD13G1114900 Malus domestica HOM05D005590 ORTHO05D007084 1.2e-177 627.9 438 72.1
THA.LOC104808470 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 1.9e-135 487.6 330 73.0
SEGI_14306 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 8.0e-110 402.5 307 63.8
MD13G1114500 Malus domestica HOM05D005590 ORTHO05D007084 2.2e-104 384.4 301 67.4
THA.LOC104807890 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 9.5e-95 352.4 255 69.4
MD13G1115100 Malus domestica HOM05D005590 ORTHO05D007084 2.0e-92 344.7 285 61.4
Thecc.01G288800 Theobroma cacao HOM05D005590 ORTHO05D007084 1.6e-81 308.5 213 70.9
FAN17G0818 Fragaria x ananassa HOM05D005590 ORTHO05D007084 1.1e-79 302.4 265 60.4
MD13G1114100 Malus domestica HOM05D005590 ORTHO05D007084 4.1e-74 283.9 391 44.8
MD16G1113300 Malus domestica HOM05D005590 ORTHO05D007084 1.4e-61 242.3 276 50.7
CAN.G1862.1 Capsicum annuum HOM05D005590 ORTHO05D007084 5.4e-58 230.3 201 60.7
SEGI_06493 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 1.5e-55 222.2 139 77.0
SEGI_40048 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 4.2e-50 204.1 140 71.4
SGA_v2.0_scaffold218G42496 Striga asiatica HOM05D005590 ORTHO05D007084 5.6e-39 167.2 117 72.6
Zm00001eb372290 Zea mays HOM05D005590 ORTHO05D007084 7.6e-36 156.8 94 77.7
Glyma.08G102966 Glycine max HOM05D005590 ORTHO05D007084 7.9e-25 120.2 102 58.8
Thecc.01G288900 Theobroma cacao HOM05D005590 ORTHO05D007084 7.9e-25 120.2 122 50.8
HanXRQChr10g0279721 Helianthus annuus HOM05D005590 ORTHO05D007084 1.8e-24 119.0 85 62.4
MBI11_g15881_MAGBIO Magnolia biondii HOM05D005590 ORTHO05D007084 1.3e-22 112.8 82 69.5
SEGI_08905 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 2.8e-22 111.7 76 75.0
Zm00001eb019970 Zea mays HOM05D005590 ORTHO05D007084 1.2e-17 96.3 63 76.2
TAR629G1224 Trochodendron aralioides HOM05D005590 ORTHO05D043575 2.7e-17 95.1 84 56.0
Cfa009349 Carpinus fangiana HOM05D005590 ORTHO05D043575 2.4e-13 82.0 84 54.8
Glyma.08G103032 Glycine max HOM05D005590 ORTHO05D007084 4.1e-13 81.3 67 59.7
Atru.chr11.2280 Acer truncatum HOM05D005590 ORTHO05D007084 1.7e-11 75.9 74 56.8
SHI17942 Sapria himalayana HOM05D000084 ORTHO05D002602 3.3e-07 61.6 44 63.6
SEGI_03265 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 1.3e-06 59.7 42 71.4

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (5 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (3 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings