Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold63G21753 Striga asiatica HOM05D013352 ORTHO05D013588 2.8e-138 496.5 598 100.0
SGA_v2.0_scaffold63G21748 Striga asiatica HOM05D000029 ORTHO05D013588 8.8e-39 166.0 493 60.4
SGA_v2.0_scaffold169G38665 Striga asiatica HOM05D000029 ORTHO05D001072 8.3e-29 132.9 99 72.7
Migut.E01540 Erythranthe guttata HOM05D000029 ORTHO05D001072 1.2e-19 102.4 97 54.6
SGA_v2.0_scaffold169G38663 Striga asiatica HOM05D000029 ORTHO05D001072 1.1e-17 95.9 94 54.3
MSTRG.1665 Avicennia marina HOM05D000029 ORTHO05D001072 2.3e-15 88.2 99 49.5
Oeu006964.1 Olea europaea HOM05D000029 ORTHO05D001072 2.0e-14 85.1 90 50.0
SalBow1G0246 Salvia bowleyana HOM05D000029 ORTHO05D001072 9.8e-14 82.8 99 45.5
Lj7C697T11 Lonicera japonica HOM05D000029 ORTHO05D001072 2.9e-13 81.3 94 50.0
Cc08_g09940 Coffea canephora HOM05D000029 ORTHO05D001072 3.7e-13 80.9 94 48.9
Hma1.2p1_0049F.1_g028290 Hydrangea macrophylla HOM05D000029 ORTHO05D001072 1.1e-12 79.3 94 45.7
Rhsim01G0085800 Rhododendron simsii HOM05D000029 ORTHO05D001072 9.2e-12 76.3 95 49.5
Lsat_1_v5_gn_6_8820 Lactuca sativa HOM05D000029 ORTHO05D001072 2.7e-11 74.7 78 42.3
Dinv23396 Davidia involucrata HOM05D004433 ORTHO05D005251 6.0e-11 73.6 94 42.6
Dinv27933 Davidia involucrata HOM05D000029 ORTHO05D001072 7.8e-11 73.2 82 46.3
Carub.0006s2367 Capsella rubella HOM05D000029 ORTHO05D001072 1.0e-10 72.8 280 48.2
Rhsim01G0056700 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.3e-10 72.4 95 47.4
Rhsim01G0086600 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.3e-10 72.4 95 46.3
RhsimUnG0233200 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.3e-10 72.4 95 46.3
RhsimUnG0155800 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.7e-10 72.0 95 46.3
SGA_v2.0_scaffold163G38056 Striga asiatica HOM05D000029 ORTHO05D001072 1.7e-10 72.0 89 48.3
vmacro00184 Vaccinium macrocarpon HOM05D000029 ORTHO05D001072 3.0e-10 71.2 94 43.6
Rhsim01G0056100 Rhododendron simsii HOM05D000029 ORTHO05D001072 3.9e-10 70.9 95 46.3
Haze_21923 Corylus avellana HOM05D000029 ORTHO05D001072 5.0e-10 70.5 94 43.6
HanXRQChr07g0206001 Helianthus annuus HOM05D000029 ORTHO05D001072 6.6e-10 70.1 92 40.2
Nitab4.5_0005618g0010 Nicotiana tabacum HOM05D000029 ORTHO05D001072 6.6e-10 70.1 77 46.8
Peaxi162Scf00699g00413 Petunia axillaris HOM05D000029 ORTHO05D001072 6.6e-10 70.1 82 45.1
PGSC0003DMG400007634 Solanum tuberosum HOM05D000029 ORTHO05D001072 6.6e-10 70.1 81 46.9
Atru.chr7.2052 Acer truncatum HOM05D000029 ORTHO05D001072 8.6e-10 69.7 91 46.2
Rhsim11G0050500 Rhododendron simsii HOM05D000029 ORTHO05D001072 8.6e-10 69.7 80 45.0
TWI34G0455 Tripterygium wilfordii HOM05D000029 ORTHO05D001072 1.5e-09 68.9 87 44.8
Rhsim01G0142900 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.9e-09 68.6 80 45.0
Rhsim11G0050600 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.9e-09 68.6 80 45.0
GSVIVG01035313001 Vitis vinifera HOM05D000029 ORTHO05D001072 2.5e-09 68.2 94 45.7
Rhsim11G0049700 Rhododendron simsii HOM05D000029 ORTHO05D001072 3.3e-09 67.8 94 40.4
AUR62040223 Chenopodium quinoa HOM05D000029 ORTHO05D001072 4.3e-09 67.4 79 40.5
Rhsim01G0075000 Rhododendron simsii HOM05D000029 ORTHO05D001072 4.3e-09 67.4 73 49.3
CiPaw.08G027200 Carya illinoinensis HOM05D000029 ORTHO05D001072 5.6e-09 67.0 94 41.5
QL12p040931 Quercus lobata HOM05D000029 ORTHO05D001072 7.3e-09 66.6 94 42.6
SHI47023 Sapria himalayana HOM05D013352 ORTHO05D013588 7.3e-09 66.6 158 39.2
SHI50356 Sapria himalayana HOM05D013352 ORTHO05D013588 7.3e-09 66.6 158 39.2
TAR383G0513 Trochodendron aralioides HOM05D000029 ORTHO05D001072 7.3e-09 66.6 94 44.7
EL10Ac2g03974 Beta vulgaris HOM05D000029 ORTHO05D001072 9.5e-09 66.2 94 40.4
EL10Ac2g03975 Beta vulgaris HOM05D000029 ORTHO05D001072 9.5e-09 66.2 94 40.4
AUR62009227 Chenopodium quinoa HOM05D000029 ORTHO05D001072 9.5e-09 66.2 94 40.4
Nitab4.5_0000318g0160 Nicotiana tabacum HOM05D000029 ORTHO05D001072 9.5e-09 66.2 81 43.2
Rhsim01G0083700 Rhododendron simsii HOM05D000029 ORTHO05D001072 9.5e-09 66.2 72 44.4
Rhsim11G0050300 Rhododendron simsii HOM05D000029 ORTHO05D001072 1.2e-08 65.9 85 43.5
CAN.G20.15 Capsicum annuum HOM05D000029 ORTHO05D001072 1.6e-08 65.5 81 43.2
AUR62009224 Chenopodium quinoa HOM05D000029 ORTHO05D001072 1.6e-08 65.5 66 42.4
Cc06_g10520 Coffea canephora HOM05D000029 ORTHO05D001072 1.6e-08 65.5 86 43.0
PGR044G1126 Punica granatum HOM05D000029 ORTHO05D001072 1.6e-08 65.5 89 37.1
DCAR_003078 Daucus carota HOM05D000029 ORTHO05D001072 2.1e-08 65.1 94 43.6
Oeu018572.1 Olea europaea HOM05D000029 ORTHO05D001072 2.1e-08 65.1 90 37.8
Ah.10g034810 Amaranthus hybridus HOM05D000029 ORTHO05D001072 2.8e-08 64.7 94 38.3
AT5G25910 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 2.8e-08 64.7 82 43.9
ClCG08G012090 Citrullus lanatus HOM05D000029 ORTHO05D001072 4.7e-08 63.9 91 44.0
COL.COLO4_19954 Corchorus olitorius HOM05D000029 ORTHO05D001072 4.7e-08 63.9 90 42.2
Rhsim11G0050000 Rhododendron simsii HOM05D000029 ORTHO05D001072 4.7e-08 63.9 80 42.5
Rhsim11G0050100 Rhododendron simsii HOM05D000029 ORTHO05D001072 4.7e-08 63.9 80 42.5
HanXRQChr09g0257661 Helianthus annuus HOM05D000029 ORTHO05D001072 6.2e-08 63.5 79 43.0
Lsat_1_v5_gn_8_98420 Lactuca sativa HOM05D000029 ORTHO05D001072 8.0e-08 63.2 78 42.3
Hund19494 Selenicereus undatus HOM05D000029 ORTHO05D001072 8.0e-08 63.2 95 40.0
C02p59250 Brassica napus HOM05D000029 ORTHO05D001072 1.1e-07 62.8 84 45.2
Carub.0006s2366 Capsella rubella HOM05D000053 ORTHO05D000035 1.1e-07 62.8 268 47.4
DCAR_000765 Daucus carota HOM05D000029 ORTHO05D001072 1.1e-07 62.8 73 41.1
Solyc08g066210.3 Solanum lycopersicum HOM05D000029 ORTHO05D001072 1.1e-07 62.8 81 44.4
CARHR187510 Cardamine hirsuta HOM05D000029 ORTHO05D001072 1.4e-07 62.4 94 43.6
AL6G37870 Arabidopsis lyrata HOM05D000029 ORTHO05D001072 1.8e-07 62.0 94 42.6
Gohir.D05G046900 Gossypium hirsutum HOM05D000029 ORTHO05D001072 1.8e-07 62.0 86 41.9
Gorai.009G048200 Gossypium raimondii HOM05D000029 ORTHO05D001072 1.8e-07 62.0 86 41.9
Lsat_1_v5_gn_3_109121 Lactuca sativa HOM05D000029 ORTHO05D001072 1.8e-07 62.0 64 39.1
Os01g0742400 Oryza sativa ssp. japonica HOM05D000029 ORTHO05D001072 1.8e-07 62.0 66 42.4
Sopen08g019890 Solanum pennellii HOM05D000029 ORTHO05D001072 1.8e-07 62.0 81 44.4
Atru.chr2.3395 Acer truncatum HOM05D000071 ORTHO05D000029 2.3e-07 61.6 157 28.7
Dinv27931 Davidia involucrata HOM05D000029 ORTHO05D001072 2.3e-07 61.6 78 46.2
Gohir.A07G022237 Gossypium hirsutum HOM05D000029 ORTHO05D001072 2.3e-07 61.6 84 39.3
SalBow1G1615 Salvia bowleyana HOM05D000029 ORTHO05D001072 2.3e-07 61.6 84 44.0
Aa31LG11G4940 Aethionema arabicum HOM05D000029 ORTHO05D001072 3.1e-07 61.2 94 42.6
AT5G25930 Arabidopsis thaliana HOM05D000029 ORTHO05D001072 3.1e-07 61.2 94 41.5
CiPaw.04G156100 Carya illinoinensis HOM05D000029 ORTHO05D001072 3.1e-07 61.2 91 41.8
MELO3C011127.2 Cucumis melo HOM05D000029 ORTHO05D001072 3.1e-07 61.2 87 42.5
Thhalv10003585m.g Eutrema salsugineum HOM05D000029 ORTHO05D001072 3.1e-07 61.2 268 45.5
HanXRQChr03g0077951 Helianthus annuus HOM05D000029 ORTHO05D001072 4.0e-07 60.8 78 41.0
HanXRQChr13g0409641 Helianthus annuus HOM05D000029 ORTHO05D001072 4.0e-07 60.8 60 41.7
Lsat_1_v5_gn_8_98240 Lactuca sativa HOM05D000029 ORTHO05D001072 4.0e-07 60.8 81 42.0
Nitab4.5_0000664g0060 Nicotiana tabacum HOM05D000029 ORTHO05D001072 4.0e-07 60.8 72 45.8
TAR383G1083 Trochodendron aralioides HOM05D000029 ORTHO05D001072 4.0e-07 60.8 90 42.2
A02p39530 Brassica napus HOM05D000029 ORTHO05D001072 6.8e-07 60.1 84 44.0
BraA02t08919Z Brassica rapa HOM05D000029 ORTHO05D001072 6.8e-07 60.1 84 44.0
Cc06_g10500 Coffea canephora HOM05D000029 ORTHO05D001072 6.8e-07 60.1 86 40.7
Duzib168G1136 Durio zibethinus HOM05D000029 ORTHO05D001072 6.8e-07 60.1 82 41.5
THA.LOC104811260 Tarenaya hassleriana HOM05D000029 ORTHO05D001072 6.8e-07 60.1 94 43.6
C07p42000 Brassica napus HOM05D000029 ORTHO05D001072 8.9e-07 59.7 73 47.9
Gohir.D07G024900 Gossypium hirsutum HOM05D000029 ORTHO05D001072 8.9e-07 59.7 84 38.1
HanXRQChr12g0358121 Helianthus annuus HOM05D000029 ORTHO05D001072 8.9e-07 59.7 79 43.0
MD08G1110500 Malus domestica HOM05D000029 ORTHO05D001072 8.9e-07 59.7 94 38.3
Ah.10g034800 Amaranthus hybridus HOM05D000029 ORTHO05D001072 1.2e-06 59.3 94 31.9
CSS0002126 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D001072 1.2e-06 59.3 90 40.0
Gohir.A06G091400 Gossypium hirsutum HOM05D000029 ORTHO05D001072 1.2e-06 59.3 82 42.7
HanXRQChr16g0507851 Helianthus annuus HOM05D000029 ORTHO05D001072 1.2e-06 59.3 81 43.2
Lsat_1_v5_gn_6_7801 Lactuca sativa HOM05D000029 ORTHO05D001072 1.2e-06 59.3 77 32.5
BolC2t11987H Brassica oleracea HOM05D000029 ORTHO05D001072 1.5e-06 58.9 84 44.0
Gorai.001G026000 Gossypium raimondii HOM05D000029 ORTHO05D001072 1.5e-06 58.9 84 38.1
Lsat_1_v5_gn_6_7820 Lactuca sativa HOM05D000029 ORTHO05D001072 1.5e-06 58.9 90 32.2
Oeu015770.1 Olea europaea HOM05D000029 ORTHO05D001072 1.5e-06 58.9 77 39.0
AL6G37850 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 2.0e-06 58.5 94 40.4
C07p41990 Brassica napus HOM05D000029 ORTHO05D001072 2.0e-06 58.5 94 42.6
Migut.A00181 Erythranthe guttata HOM05D000029 ORTHO05D001072 2.0e-06 58.5 82 37.8
Lj4A384G20 Lonicera japonica HOM05D000029 ORTHO05D001072 2.0e-06 58.5 83 37.3
Manes.16G073300 Manihot esculenta HOM05D000029 ORTHO05D001072 2.6e-06 58.2 94 41.5
Sed0006304 Sechium edule HOM05D000029 ORTHO05D001072 2.6e-06 58.2 91 40.7
BcaB07g29977 Brassica carinata HOM05D000029 ORTHO05D001072 3.4e-06 57.8 77 45.5
Cfa013386 Carpinus fangiana HOM05D000029 ORTHO05D001072 3.4e-06 57.8 99 39.4
HanXRQChr12g0358101 Helianthus annuus HOM05D000029 ORTHO05D001072 4.4e-06 57.4 90 35.6
Lj4A382G43 Lonicera japonica HOM05D000029 ORTHO05D001072 4.4e-06 57.4 86 36.0
Potri.006G235500 Populus trichocarpa HOM05D000029 ORTHO05D001072 4.4e-06 57.4 88 35.2
QL12p040963 Quercus lobata HOM05D000029 ORTHO05D001072 4.4e-06 57.4 95 38.9
TAR624G0969 Trochodendron aralioides HOM05D000029 ORTHO05D001072 4.4e-06 57.4 88 38.6
GSVIVG01035312001 Vitis vinifera HOM05D000029 ORTHO05D001072 4.4e-06 57.4 68 47.1
BcaNung04548 Brassica carinata HOM05D000029 ORTHO05D001072 5.8e-06 57.0 75 45.3
CSS0027976 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D001072 5.8e-06 57.0 95 35.8
Migut.K00544 Erythranthe guttata HOM05D000029 ORTHO05D001072 5.8e-06 57.0 89 37.1
Gohir.D06G090700 Gossypium hirsutum HOM05D000029 ORTHO05D001072 5.8e-06 57.0 82 41.5
Gorai.010G104300 Gossypium raimondii HOM05D000029 ORTHO05D001072 5.8e-06 57.0 82 41.5
SGA_v2.0_scaffold512G52634 Striga asiatica HOM05D000029 ORTHO05D001072 5.8e-06 57.0 88 36.4
Dinv42248 Davidia involucrata HOM05D000029 ORTHO05D001072 7.5e-06 56.6 88 40.9
HanXRQChr16g0507841 Helianthus annuus HOM05D000029 ORTHO05D001072 7.5e-06 56.6 91 42.9
Potri.018G057100 Populus trichocarpa HOM05D000029 ORTHO05D001072 7.5e-06 56.6 94 36.2
Prupe.1G444700 Prunus persica HOM05D000029 ORTHO05D001072 7.5e-06 56.6 81 37.0
Ah.10g034790 Amaranthus hybridus HOM05D000029 ORTHO05D001072 9.8e-06 56.2 59 40.7
CARHR039350 Cardamine hirsuta HOM05D000053 ORTHO05D000035 9.8e-06 56.2 94 38.3
CiPaw.04G156700 Carya illinoinensis HOM05D000029 ORTHO05D001072 9.8e-06 56.2 91 38.5
FvH4_2g35260 Fragaria vesca HOM05D000029 ORTHO05D001072 9.8e-06 56.2 84 40.5
Lj4A381T23 Lonicera japonica HOM05D000029 ORTHO05D001072 9.8e-06 56.2 94 38.3
HPP92_008713 Vanilla planifolia HOM05D000029 ORTHO05D001072 9.8e-06 56.2 66 40.9
GSVIVG01015298001 Vitis vinifera HOM05D000029 ORTHO05D001072 9.8e-06 56.2 76 40.8

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (0 genes)
Coffea canephora (3 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (2 genes)
Davidia involucrata (4 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (8 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (6 genes)
Lonicera japonica (4 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (3 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (15 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (6 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (3 genes)
Zea mays (0 genes)

Program Settings