Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03060 Striga asiatica HOM05D005894 ORTHO05D007461 1.4e-178 629.4 299 100.0
MSTRG.26254 Avicennia marina HOM05D005894 ORTHO05D007461 1.9e-114 416.4 267 70.4
Migut.B01913 Erythranthe guttata HOM05D005894 ORTHO05D007461 2.4e-114 416.0 306 65.0
MSTRG.20916 Avicennia marina HOM05D005894 ORTHO05D007461 2.2e-107 392.9 292 65.8
SalBow6G4791 Salvia bowleyana HOM05D005894 ORTHO05D007461 1.9e-106 389.8 312 61.2
SalBow3G0292 Salvia bowleyana HOM05D005894 ORTHO05D007461 1.5e-103 380.2 208 80.3
SalBow3G4666 Salvia bowleyana HOM05D005894 ORTHO05D007461 1.5e-103 380.2 208 80.3
Hma1.2p1_0309F.1_g120580 Hydrangea macrophylla HOM05D005894 ORTHO05D007461 1.0e-91 340.9 226 66.4
TAR375G0623 Trochodendron aralioides HOM05D005894 ORTHO05D007461 1.3e-91 340.5 241 63.9
unitig_52.g17564 Utricularia gibba HOM05D005894 ORTHO05D007461 8.5e-91 337.8 290 57.9
HanXRQChr16g0524851 Helianthus annuus HOM05D005894 ORTHO05D007461 1.9e-90 336.7 233 64.4
MSTRG.20917 Avicennia marina HOM05D005894 ORTHO05D007461 2.1e-89 333.2 300 54.0
Oeu042964.1 Olea europaea HOM05D005894 ORTHO05D007461 2.1e-89 333.2 243 61.7
Nn3g18834 Nelumbo nucifera HOM05D005894 ORTHO05D007461 3.6e-89 332.4 275 58.5
Actinidia20275 Actinidia chinensis HOM05D005894 ORTHO05D007461 1.0e-88 330.9 301 55.1
ClCG06G002760 Citrullus lanatus HOM05D005894 ORTHO05D007461 5.1e-88 328.6 226 65.5
Rhsim07G0001000 Rhododendron simsii HOM05D005894 ORTHO05D007461 5.1e-88 328.6 234 62.8
ECA234G4535 Erigeron canadensis HOM05D005894 ORTHO05D007461 1.1e-87 327.4 289 56.4
Lsat_1_v5_gn_4_31980 Lactuca sativa HOM05D005894 ORTHO05D007461 1.1e-87 327.4 233 64.4
HanXRQChr17g0563091 Helianthus annuus HOM05D005894 ORTHO05D007461 1.5e-87 327.0 282 56.0
Lsat_1_v5_gn_4_31960 Lactuca sativa HOM05D005894 ORTHO05D007461 1.7e-86 323.6 281 55.5
Solyc01g096380.1 Solanum lycopersicum HOM05D005894 ORTHO05D007461 1.7e-86 323.6 240 63.3
Sed0016091 Sechium edule HOM05D005894 ORTHO05D007461 2.2e-86 323.2 291 55.7
CAN.G1045.39 Capsicum annuum HOM05D005894 ORTHO05D007461 3.7e-86 322.4 305 52.8
MELO3C022251.2 Cucumis melo HOM05D005894 ORTHO05D007461 1.4e-85 320.5 244 61.1
CsaV3_6G008930 Cucumis sativus L. HOM05D005894 ORTHO05D007461 1.4e-85 320.5 227 63.9
PGSC0003DMG400018381 Solanum tuberosum HOM05D005894 ORTHO05D007461 1.4e-85 320.5 240 61.7
Cc02_g39840 Coffea canephora HOM05D005894 ORTHO05D007461 2.4e-85 319.7 339 51.6
vmacro04295 Vaccinium macrocarpon HOM05D005894 ORTHO05D007461 3.1e-85 319.3 279 55.2
Sed0008841 Sechium edule HOM05D005894 ORTHO05D007461 4.1e-85 318.9 227 63.4
Sc01g0002310 Simmondsia chinensis HOM05D005894 ORTHO05D007461 4.1e-85 318.9 279 55.9
Sopen00g010520 Solanum pennellii HOM05D005894 ORTHO05D007461 5.3e-85 318.5 240 61.7
Haze_15713 Corylus avellana HOM05D005894 ORTHO05D007461 9.1e-85 317.8 293 52.6
unitig_744.g24593 Utricularia gibba HOM05D005894 ORTHO05D007461 2.0e-84 316.6 271 57.2
Peaxi162Scf00767g00044 Petunia axillaris HOM05D005894 ORTHO05D007461 3.4e-84 315.8 312 50.6
MBI04_g25320_MAGBIO Magnolia biondii HOM05D005894 ORTHO05D007461 4.5e-84 315.5 230 62.6
unitig_744.g24591 Utricularia gibba HOM05D005894 ORTHO05D007461 4.5e-84 315.5 266 56.4
A10p00720 Brassica napus HOM05D005894 ORTHO05D007461 5.9e-84 315.1 293 53.2
CiPaw.01G080700 Carya illinoinensis HOM05D005894 ORTHO05D007461 5.9e-84 315.1 226 61.9
Haze_15704 Corylus avellana HOM05D005894 ORTHO05D007461 5.9e-84 315.1 293 52.2
Glyma.07G051400 Glycine max HOM05D005894 ORTHO05D007461 1.0e-83 314.3 310 49.7
THA.LOC104801356 Tarenaya hassleriana HOM05D005894 ORTHO05D007461 1.0e-83 314.3 228 64.0
arahy.Tifrunner.gnm1.ann1.IJN1JI Arachis hypogaea HOM05D005894 ORTHO05D007461 1.3e-83 313.9 229 61.1
arahy.Tifrunner.gnm1.ann1.UMNZ42 Arachis hypogaea HOM05D005894 ORTHO05D007461 1.3e-83 313.9 229 61.1
arahy.Tifrunner.gnm1.ann1.YB3WUJ Arachis hypogaea HOM05D005894 ORTHO05D007461 1.3e-83 313.9 229 61.1
PSO063G1123 Papaver somniferum HOM05D005894 ORTHO05D007461 1.3e-83 313.9 246 59.3
Cpa.g.sc141.18 Carica papaya HOM05D005894 ORTHO05D007461 1.7e-83 313.5 227 61.2
BraA10t42349Z Brassica rapa HOM05D005894 ORTHO05D007461 2.2e-83 313.2 293 52.9
Manes.01G241500 Manihot esculenta HOM05D005894 ORTHO05D007461 2.2e-83 313.2 285 52.6
Cfa003752 Carpinus fangiana HOM05D005894 ORTHO05D007461 2.9e-83 312.8 293 52.9
Nitab4.5_0000307g0270 Nicotiana tabacum HOM05D005894 ORTHO05D007461 2.9e-83 312.8 240 60.0
Ah.05g179110 Amaranthus hybridus HOM05D005894 ORTHO05D007461 6.5e-83 311.6 235 60.9
arahy.Tifrunner.gnm1.ann1.FN9JYV Arachis hypogaea HOM05D005894 ORTHO05D007461 8.5e-83 311.2 229 60.3
QL08p046715 Quercus lobata HOM05D005894 ORTHO05D007461 3.2e-82 309.3 301 51.2
Sabra02G0136100 Salix brachista HOM05D005894 ORTHO05D007461 3.2e-82 309.3 284 52.1
Potri.002G177500 Populus trichocarpa HOM05D005894 ORTHO05D007461 4.2e-82 308.9 284 51.4
TWI14G1398 Tripterygium wilfordii HOM05D005894 ORTHO05D007461 4.2e-82 308.9 295 51.9
C05p00760 Brassica napus HOM05D005894 ORTHO05D007461 7.2e-82 308.1 228 61.8
unitig_21.g20086 Utricularia gibba HOM05D005894 ORTHO05D007461 7.2e-82 308.1 267 55.1
Aa31LG1G10550 Aethionema arabicum HOM05D005894 ORTHO05D007461 1.6e-81 307.0 234 60.3
Sc01g0002320 Simmondsia chinensis HOM05D005894 ORTHO05D007461 2.1e-81 306.6 290 51.0
Carub.0001s0103 Capsella rubella HOM05D005894 ORTHO05D007461 2.7e-81 306.2 228 60.5
BolC5t28860H Brassica oleracea HOM05D005894 ORTHO05D007461 3.6e-81 305.8 228 61.4
SEGI_06461 Sequoiadendron giganteum HOM05D005894 ORTHO05D007461 6.1e-81 305.1 230 60.9
CARHR001290 Cardamine hirsuta HOM05D005894 ORTHO05D007461 7.9e-81 304.7 228 61.0
AL1G11320 Arabidopsis lyrata HOM05D005894 ORTHO05D007461 1.4e-80 303.9 228 60.5
BcaB03g13563 Brassica carinata HOM05D005894 ORTHO05D007461 1.8e-80 303.5 228 61.0
Thhalv10008287m.g Eutrema salsugineum HOM05D005894 ORTHO05D007461 1.8e-80 303.5 239 59.0
Phvul.010G118000 Phaseolus vulgaris HOM05D005894 ORTHO05D007461 2.3e-80 303.1 229 59.0
Lj3g0011008 Lotus japonicus HOM05D005894 ORTHO05D007461 3.9e-80 302.4 297 51.9
Atru.chr5.746 Acer truncatum HOM05D005894 ORTHO05D007461 5.1e-80 302.0 227 57.7
AUR62004546 Chenopodium quinoa HOM05D005894 ORTHO05D007461 5.1e-80 302.0 300 51.0
Sp1g01110 Schrenkiella parvula HOM05D005894 ORTHO05D007461 5.1e-80 302.0 228 61.0
AUR62022660 Chenopodium quinoa HOM05D005894 ORTHO05D007461 8.8e-80 301.2 223 61.4
Ciclev10023878m.g Citrus clementina HOM05D005894 ORTHO05D007461 1.5e-79 300.4 229 59.0
FAN10G2153 Fragaria x ananassa HOM05D005894 ORTHO05D007461 2.0e-79 300.1 287 50.9
Medtr8g024680 Medicago truncatula HOM05D005894 ORTHO05D007461 2.6e-79 299.7 228 57.9
Potri.014G103800 Populus trichocarpa HOM05D005894 ORTHO05D007461 2.6e-79 299.7 290 51.0
VMungo0331G1846 Vigna mungo HOM05D005894 ORTHO05D007461 2.6e-79 299.7 308 48.1
Lalb_Chr17g0342931 Lupinus albus HOM05D005894 ORTHO05D007461 3.3e-79 299.3 228 58.3
AT1G01180 Arabidopsis thaliana HOM05D005894 ORTHO05D007461 4.4e-79 298.9 227 60.4
Lj9P603T40 Lonicera japonica HOM05D005894 ORTHO05D007461 4.4e-79 298.9 203 64.5
FAN10G4192 Fragaria x ananassa HOM05D005894 ORTHO05D007461 7.4e-79 298.1 288 50.0
Sc01g0000420 Simmondsia chinensis HOM05D005894 ORTHO05D007461 7.4e-79 298.1 235 57.0
Ah.07g207870 Amaranthus hybridus HOM05D005894 ORTHO05D007461 9.7e-79 297.7 233 58.8
COL.COLO4_06220 Corchorus olitorius HOM05D005894 ORTHO05D007461 9.7e-79 297.7 223 59.2
FAN03G0327 Fragaria x ananassa HOM05D005894 ORTHO05D007461 9.7e-79 297.7 288 50.0
TPR.G14294 Trifolium pratense HOM05D005894 ORTHO05D007461 9.7e-79 297.7 268 51.1
FAN06G1719 Fragaria x ananassa HOM05D005894 ORTHO05D007461 1.3e-78 297.4 234 56.4
Gohir.A07G134700 Gossypium hirsutum HOM05D005894 ORTHO05D007461 1.7e-78 297.0 293 48.1
PSO782G1789 Papaver somniferum HOM05D005894 ORTHO05D007461 1.7e-78 297.0 246 57.7
Ca_23494_v3 Cicer arietinum L. HOM05D005894 ORTHO05D007461 2.8e-78 296.2 228 58.3
Ca_29944_v3 Cicer arietinum L. HOM05D005894 ORTHO05D007461 2.8e-78 296.2 228 58.3
ATR0090G035 Amborella trichopoda HOM05D005894 ORTHO05D007461 4.8e-78 295.4 230 60.4
Dinv32633 Davidia involucrata HOM05D005894 ORTHO05D007461 2.4e-77 293.1 296 51.0
Gorai.001G151400 Gossypium raimondii HOM05D005894 ORTHO05D007461 4.1e-77 292.4 293 47.4
Psat4g216640 Pisum sativum HOM05D005894 ORTHO05D007461 1.2e-76 290.8 302 48.7
Prupe.2G195400 Prunus persica HOM05D005894 ORTHO05D007461 1.5e-76 290.4 303 49.2
Duzib138G0081 Durio zibethinus HOM05D005894 ORTHO05D007461 3.5e-76 289.3 311 47.3
Lj2g0016031 Lotus japonicus HOM05D005894 ORTHO05D007461 7.7e-76 288.1 286 52.4
MD07G1156900 Malus domestica HOM05D005894 ORTHO05D007461 1.3e-75 287.3 227 57.3
Thecc.01G335500 Theobroma cacao HOM05D005894 ORTHO05D007461 8.5e-75 284.6 305 46.9
Duzib133G0870 Durio zibethinus HOM05D005894 ORTHO05D007461 1.1e-74 284.3 300 46.3
QL08p046701 Quercus lobata HOM05D005894 ORTHO05D007461 1.6e-73 280.4 213 60.1
Gohir.A12G115600 Gossypium hirsutum HOM05D005894 ORTHO05D007461 1.5e-71 273.9 296 46.3
Gohir.D12G119200 Gossypium hirsutum HOM05D005894 ORTHO05D007461 4.4e-71 272.3 286 46.2
MBI04_g22377_MAGBIO Magnolia biondii HOM05D005894 ORTHO05D007461 1.7e-70 270.4 231 57.1
Haze_15705 Corylus avellana HOM05D005894 ORTHO05D007461 1.4e-69 267.3 254 51.6
Pp3c20_5150 Physcomitrium patens HOM05D005894 ORTHO05D007461 1.8e-69 266.9 231 51.5
unitig_744.g24581 Utricularia gibba HOM05D005894 ORTHO05D007461 1.2e-68 264.2 260 52.7
AagrBONN_evm.TU.Sc2ySwM_228.2264 Anthoceros agrestis HOM05D005894 ORTHO05D007461 3.5e-68 262.7 232 52.2
Pp3c23_20890 Physcomitrium patens HOM05D005894 ORTHO05D007461 1.0e-67 261.2 220 52.7
Mapoly0044s0088 Marchantia polymorpha HOM05D005894 ORTHO05D007461 2.2e-67 260.0 231 52.4
TPR.G25260 Trifolium pratense HOM05D005894 ORTHO05D007461 6.5e-67 258.5 185 61.6
EL10Ac5g10561 Beta vulgaris HOM05D005894 ORTHO05D007461 1.8e-64 250.4 233 50.6
Gorai.008G129200 Gossypium raimondii HOM05D005894 ORTHO05D007461 3.0e-64 249.6 198 56.1
Os09g0518900 Oryza sativa ssp. japonica HOM05D005894 ORTHO05D007461 5.2e-64 248.8 236 51.3
FAN01G2899 Fragaria x ananassa HOM05D005894 ORTHO05D007461 6.7e-64 248.4 201 53.7
Zm00001eb102910 Zea mays HOM05D005894 ORTHO05D007461 6.7e-64 248.4 234 52.1
Zm00001eb102940 Zea mays HOM05D005894 ORTHO05D007461 6.7e-64 248.4 234 52.1
Gohir.D07G139300 Gossypium hirsutum HOM05D005894 ORTHO05D007461 1.7e-59 233.8 245 46.1
Oeu022737.1 Olea europaea HOM05D005894 ORTHO05D007461 9.4e-58 228.0 149 67.1
FAN06G4171 Fragaria x ananassa HOM05D005894 ORTHO05D007461 1.1e-45 188.0 133 61.7
Sc17g0001460 Simmondsia chinensis HOM05D005894 ORTHO05D387453 2.9e-43 179.9 226 41.6
EL10Ac1g00202 Beta vulgaris HOM05D005894 ORTHO05D007461 1.2e-39 167.9 137 59.9
SMO367G0414 Selaginella moellendorffii HOM05D005894 ORTHO05D007461 7.0e-37 158.7 137 52.6
unitig_21.g20129 Utricularia gibba HOM05D005894 ORTHO05D007461 2.5e-34 150.2 101 63.4
RcHm_v2.0_Chr1g0360831 Rosa chinensis HOM05D005894 ORTHO05D007461 2.8e-33 146.7 123 54.5
RcHm_v2.0_Chr1g0360821 Rosa chinensis HOM05D005894 ORTHO05D007461 8.9e-32 141.7 104 57.7
Sc22g0003370 Simmondsia chinensis HOM05D005894 ORTHO05D007461 1.0e-19 101.7 83 53.0
unitig_21.g20130 Utricularia gibba HOM05D005894 ORTHO05D007461 1.3e-19 101.3 112 42.0
unitig_52.g17562 Utricularia gibba HOM05D005894 ORTHO05D420364 1.8e-16 90.9 71 57.7
SMO195G0042 Selaginella moellendorffii HOM05D005894 ORTHO05D376219 8.4e-06 55.5 58 44.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (3 genes)
Beta vulgaris (2 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (6 genes)
Glycine max (1 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (5 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (8 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (2 genes)

Program Settings