Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
SGA_v2.0_scaffold376G50290	Striga asiatica	HOM05D006547	ORTHO05D008112	3.6e-123	444.9	221	100.0
SGA_v2.0_scaffold334G49085	Striga asiatica	HOM05D006547	ORTHO05D008112	4.4e-28	129.0	126	61.9
Migut.D00066	Erythranthe guttata	HOM05D000397	ORTHO05D000492	1.2e-17	94.4	68	64.7
MSTRG.21702	Avicennia marina	HOM05D006547	ORTHO05D008112	2.7e-17	93.2	133	47.4
Migut.D00065	Erythranthe guttata	HOM05D006547	ORTHO05D008112	4.3e-15	85.9	109	51.4
Oeu031894.1	Olea europaea	HOM05D000397	ORTHO05D000492	2.8e-14	83.2	76	53.9
Nitab4.5_0000222g0030	Nicotiana tabacum	HOM05D000397	ORTHO05D000492	4.0e-13	79.3	64	56.2
SalBow3G4324	Salvia bowleyana	HOM05D006547	ORTHO05D008112	8.9e-13	78.2	86	52.3
Solyc01g079290.1	Solanum lycopersicum	HOM05D000397	ORTHO05D000492	1.2e-12	77.8	64	56.2
Sopen01g031060	Solanum pennellii	HOM05D000397	ORTHO05D000492	1.2e-12	77.8	64	56.2
Nitab4.5_0006503g0020	Nicotiana tabacum	HOM05D000397	ORTHO05D000492	1.5e-12	77.4	64	54.7
Solyc01g079270.1	Solanum lycopersicum	HOM05D006547	ORTHO05D008112	1.5e-12	77.4	120	44.2
PGSC0003DMG400009058	Solanum tuberosum	HOM05D006547	ORTHO05D008112	1.5e-12	77.4	120	44.2
Oeu008480.1	Olea europaea	HOM05D006547	ORTHO05D008112	2.6e-12	76.6	120	45.0
Sopen01g031050	Solanum pennellii	HOM05D006547	ORTHO05D008112	3.4e-12	76.3	120	43.3
CAN.G293.17	Capsicum annuum	HOM05D000397	ORTHO05D000492	4.4e-12	75.9	63	54.0
CAN.G1280.37	Capsicum annuum	HOM05D006547	ORTHO05D008112	7.6e-12	75.1	105	46.7
Hma1.2p1_0486F.1_g163490	Hydrangea macrophylla	HOM05D006547	ORTHO05D008112	2.2e-11	73.6	127	44.9
PGSC0003DMG400009018	Solanum tuberosum	HOM05D000397	ORTHO05D000492	2.2e-11	73.6	71	49.3
Atru.chr5.966	Acer truncatum	HOM05D006547	ORTHO05D008112	2.9e-11	73.2	62	59.7
Potri.002G193300	Populus trichocarpa	HOM05D006547	ORTHO05D008112	4.9e-11	72.4	73	54.8
COL.COLO4_16840	Corchorus olitorius	HOM05D000007	ORTHO05D000017	6.4e-11	72.0	65	49.2
Oeu038038.1	Olea europaea	HOM05D006547	ORTHO05D008112	6.4e-11	72.0	78	56.4
Sabra02G0162800	Salix brachista	HOM05D006547	ORTHO05D008112	6.4e-11	72.0	128	39.8
CAN.G293.16	Capsicum annuum	HOM05D006547	ORTHO05D008112	1.1e-10	71.2	126	41.3
Hma1.2p1_0486F.1_g163480	Hydrangea macrophylla	HOM05D000397	ORTHO05D000492	1.1e-10	71.2	64	48.4
RcHm_v2.0_Chr3g0487241	Rosa chinensis	HOM05D000397	ORTHO05D000492	1.1e-10	71.2	63	49.2
PGSC0003DMG401007298	Solanum tuberosum	HOM05D006547	ORTHO05D008112	1.4e-10	70.9	110	44.5
Nitab4.5_0000363g0200	Nicotiana tabacum	HOM05D006547	ORTHO05D008112	1.9e-10	70.5	99	43.4
Peaxi162Scf00770g00002	Petunia axillaris	HOM05D000397	ORTHO05D000492	3.2e-10	69.7	64	51.6
Nitab4.5_0000222g0070	Nicotiana tabacum	HOM05D006547	ORTHO05D008112	4.1e-10	69.3	61	63.9
TWI18G0834	Tripterygium wilfordii	HOM05D006547	ORTHO05D008112	4.1e-10	69.3	74	52.7
TAR362G1145	Trochodendron aralioides	HOM05D006547	ORTHO05D008112	4.1e-10	69.3	113	44.2
Ciclev10022819m.g	Citrus clementina	HOM05D006547	ORTHO05D008112	5.4e-10	68.9	91	47.3
Oeu044737.1	Olea europaea	HOM05D006547	ORTHO05D008112	5.4e-10	68.9	63	55.6
Thecc.02G266700	Theobroma cacao	HOM05D006547	ORTHO05D008112	5.4e-10	68.9	132	37.9
Nitab4.5_0007407g0060	Nicotiana tabacum	HOM05D006547	ORTHO05D008112	9.2e-10	68.2	64	53.1
TWI36G0249	Tripterygium wilfordii	HOM05D006547	ORTHO05D008112	1.2e-09	67.8	73	46.6
Actinidia21386	Actinidia chinensis	HOM05D000397	ORTHO05D000492	1.6e-09	67.4	65	50.8
MD17G1277900	Malus domestica	HOM05D000397	ORTHO05D000492	1.6e-09	67.4	63	49.2
Manes.05G013600	Manihot esculenta	HOM05D006547	ORTHO05D008112	1.6e-09	67.4	69	53.6
QL12p019056	Quercus lobata	HOM05D006547	ORTHO05D008112	2.1e-09	67.0	102	44.1
vmacro02390	Vaccinium macrocarpon	HOM05D000397	ORTHO05D000492	2.1e-09	67.0	64	46.9
Peaxi162Scf00058g00236	Petunia axillaris	HOM05D006547	ORTHO05D008112	2.7e-09	66.6	63	57.1
COL.COLO4_23526	Corchorus olitorius	HOM05D006547	ORTHO05D008112	4.6e-09	65.9	107	41.1
TAR365G0268	Trochodendron aralioides	HOM05D006547	ORTHO05D008112	6.0e-09	65.5	74	50.0
TAR633G2779	Trochodendron aralioides	HOM05D006547	ORTHO05D008112	6.0e-09	65.5	128	41.4
Duzib248G0337	Durio zibethinus	HOM05D006547	ORTHO05D008112	7.8e-09	65.1	116	40.5
Cpa.g.sc18.81	Carica papaya	HOM05D006547	ORTHO05D008112	1.3e-08	64.3	91	46.2
DCAR_002885	Daucus carota	HOM05D006547	ORTHO05D008112	1.7e-08	63.9	55	56.4
Duzib251G0664	Durio zibethinus	HOM05D006547	ORTHO05D008112	1.7e-08	63.9	139	33.8
Gohir.D01G152800	Gossypium hirsutum	HOM05D006547	ORTHO05D008112	1.7e-08	63.9	99	40.4
Medtr1g096530	Medicago truncatula	HOM05D006547	ORTHO05D008112	2.3e-08	63.5	97	42.3
Solyc06g009510.1	Solanum lycopersicum	HOM05D006547	ORTHO05D008112	2.3e-08	63.5	98	45.9
FvH4_1g26990	Fragaria vesca	HOM05D006547	ORTHO05D008112	3.0e-08	63.2	63	49.2
FAN26G3307	Fragaria x ananassa	HOM05D006547	ORTHO05D008112	3.0e-08	63.2	63	49.2
TPR.G8830	Trifolium pratense	HOM05D006547	ORTHO05D008112	5.1e-08	62.4	114	42.1
arahy.Tifrunner.gnm1.ann1.BQK7VT	Arachis hypogaea	HOM05D006547	ORTHO05D008112	6.6e-08	62.0	96	38.5
DCAR_005744	Daucus carota	HOM05D006547	ORTHO05D008112	6.6e-08	62.0	112	35.7
Sopen06g004170	Solanum pennellii	HOM05D006547	ORTHO05D008112	6.6e-08	62.0	87	47.1
CiPaw.08G087700	Carya illinoinensis	HOM05D006547	ORTHO05D008112	8.6e-08	61.6	86	45.3
Gohir.A01G157750	Gossypium hirsutum	HOM05D006547	ORTHO05D008112	8.6e-08	61.6	67	49.3
Gorai.002G189200	Gossypium raimondii	HOM05D006547	ORTHO05D008112	8.6e-08	61.6	99	39.4
COL.COLO4_14628	Corchorus olitorius	HOM05D000397	ORTHO05D000492	1.1e-07	61.2	65	43.1
FAN19G2346	Fragaria x ananassa	HOM05D006547	ORTHO05D008112	1.1e-07	61.2	76	44.7
Gohir.A12G145800	Gossypium hirsutum	HOM05D006547	ORTHO05D008112	1.1e-07	61.2	112	40.2
Gohir.D12G150400	Gossypium hirsutum	HOM05D006547	ORTHO05D008112	1.1e-07	61.2	112	40.2
Gorai.008G161900	Gossypium raimondii	HOM05D006547	ORTHO05D008112	1.1e-07	61.2	112	40.2
FAN28G2331	Fragaria x ananassa	HOM05D006547	ORTHO05D008112	1.5e-07	60.8	63	47.6
Sc05g0000320	Simmondsia chinensis	HOM05D006547	ORTHO05D008112	1.5e-07	60.8	70	47.1
Sc17g0000340	Simmondsia chinensis	HOM05D006547	ORTHO05D008112	1.5e-07	60.8	112	33.0
Ca_10619_v3	Cicer arietinum L.	HOM05D006547	ORTHO05D008112	1.9e-07	60.5	104	39.4
FAN23G1292	Fragaria x ananassa	HOM05D000397	ORTHO05D000492	2.5e-07	60.1	62	48.4
Lj5g0010023	Lotus japonicus	HOM05D006547	ORTHO05D008112	2.5e-07	60.1	93	43.0
CARHR087310	Cardamine hirsuta	HOM05D010701	ORTHO05D012784	3.3e-07	59.7	136	32.4
PSO210G6541	Papaver somniferum	HOM05D006547	ORTHO05D008112	3.3e-07	59.7	56	58.9
PSO761G0312	Papaver somniferum	HOM05D006547	ORTHO05D008112	3.3e-07	59.7	56	58.9
Rhsim13G0003600	Rhododendron simsii	HOM05D000397	ORTHO05D000492	3.3e-07	59.7	64	46.9
Sabra14G0087800	Salix brachista	HOM05D006547	ORTHO05D008112	4.3e-07	59.3	160	35.0
Atru.chr5.967	Acer truncatum	HOM05D000397	ORTHO05D000492	5.6e-07	58.9	64	45.3
Duzib268G0572	Durio zibethinus	HOM05D006547	ORTHO05D008112	7.3e-07	58.5	99	38.4
FAN23G3047	Fragaria x ananassa	HOM05D006547	ORTHO05D008112	7.3e-07	58.5	63	46.0
Manes.01G229900	Manihot esculenta	HOM05D006547	ORTHO05D008112	7.3e-07	58.5	69	46.4
Potri.013G108500	Populus trichocarpa	HOM05D000397	ORTHO05D000492	7.3e-07	58.5	65	44.6
RcHm_v2.0_Chr3g0487231	Rosa chinensis	HOM05D006547	ORTHO05D008112	9.6e-07	58.2	73	47.9
CANSAT25G1528	Cannabis sativa	HOM05D006547	ORTHO05D008112	1.2e-06	57.8	53	54.7
vmacro02389	Vaccinium macrocarpon	HOM05D006547	ORTHO05D008112	1.2e-06	57.8	65	52.3
A03p37790	Brassica napus	HOM05D010701	ORTHO05D012784	1.6e-06	57.4	64	42.2
BraA03t12934Z	Brassica rapa	HOM05D010701	ORTHO05D012784	1.6e-06	57.4	64	42.2
Lalb_Chr02g0141791	Lupinus albus	HOM05D006547	ORTHO05D008112	1.6e-06	57.4	76	47.4
Phvul.007G089100	Phaseolus vulgaris	HOM05D006547	ORTHO05D008112	1.6e-06	57.4	67	52.2
Potri.014G118300	Populus trichocarpa	HOM05D006547	ORTHO05D008112	1.6e-06	57.4	72	45.8
BcaC01g05038	Brassica carinata	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	55	54.5
A05p00570	Brassica napus	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	55	52.7
C03p30880	Brassica napus	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	55	54.5
BolC3t15440H	Brassica oleracea	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	55	54.5
DCAR_012331	Daucus carota	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	63	47.6
Rhsim13G0003400	Rhododendron simsii	HOM05D006547	ORTHO05D008112	2.1e-06	57.0	70	47.1
BcaB02g08786	Brassica carinata	HOM05D006547	ORTHO05D008112	2.8e-06	56.6	55	50.9
Dinv15146	Davidia involucrata	HOM05D004325	ORTHO05D005470	2.8e-06	56.6	67	50.7
FAN28G2148	Fragaria x ananassa	HOM05D005236	ORTHO05D006557	2.8e-06	56.6	52	55.8
VMungo0720G0102	Vigna mungo	HOM05D006547	ORTHO05D008112	2.8e-06	56.6	80	46.2
AT2G47270	Arabidopsis thaliana	HOM05D006547	ORTHO05D008112	3.6e-06	56.2	75	44.0
EL10As5g23562	Beta vulgaris	HOM05D006547	ORTHO05D008112	3.6e-06	56.2	71	46.5
BcaB04g18718	Brassica carinata	HOM05D010701	ORTHO05D012784	3.6e-06	56.2	64	43.8
CSS0011798	Camellia sinensis var. sinensis	HOM05D006547	ORTHO05D008112	3.6e-06	56.2	65	47.7
BcaB01g03174	Brassica carinata	HOM05D006547	ORTHO05D008112	4.7e-06	55.8	55	52.7
C04p00620	Brassica napus	HOM05D006547	ORTHO05D008112	4.7e-06	55.8	55	50.9
BolC4t21695H	Brassica oleracea	HOM05D006547	ORTHO05D008112	4.7e-06	55.8	55	50.9
DCAR_018278	Daucus carota	HOM05D006547	ORTHO05D008112	4.7e-06	55.8	81	42.0
Sp3g10940	Schrenkiella parvula	HOM05D010701	ORTHO05D012784	4.7e-06	55.8	113	31.0
BraA05t19055Z	Brassica rapa	HOM05D006547	ORTHO05D008112	6.2e-06	55.5	55	50.9
CiPaw.07G119400	Carya illinoinensis	HOM05D006547	ORTHO05D008112	6.2e-06	55.5	93	43.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

About us

Support

Legal

Other