Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 8.5e-199 696.8 353 100.0
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.5e-110 402.9 355 62.5
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.3e-110 402.1 355 62.0
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 6.9e-108 394.8 355 61.7
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 4.6e-104 382.1 327 60.2
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 7.4e-102 374.8 355 59.4
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.1e-100 370.9 322 59.0
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 6.9e-100 368.2 303 60.1
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 9.0e-100 367.9 326 57.4
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 2.0e-99 366.7 332 59.0
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 3.4e-99 365.9 355 58.3
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 4.5e-99 365.5 326 57.1
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 1.3e-98 364.0 355 53.0
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.9e-98 362.8 320 57.2
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 2.9e-98 362.8 326 57.1
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 3.8e-98 362.5 355 53.8
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 2.3e-95 353.2 331 54.4
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.1e-94 350.9 354 55.6
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 2.5e-94 349.7 331 56.2
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.6e-93 347.1 316 57.6
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.2e-91 340.9 343 53.1
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 1.0e-90 337.8 316 55.7
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 2.2e-90 336.7 334 53.6
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 6.5e-90 335.1 344 50.6
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 2.7e-88 329.7 318 54.4
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 3.0e-87 326.2 348 51.4
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 3.9e-87 325.9 356 51.4
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 3.9e-87 325.9 354 50.6
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 1.5e-86 323.9 329 50.5
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.5e-86 323.2 347 51.3
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 1.6e-85 320.5 337 52.2
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 3.7e-85 319.3 331 51.1
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 8.2e-85 318.2 320 53.1
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 1.1e-84 317.8 333 51.7
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.1e-84 317.8 333 50.8
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.1e-84 317.8 320 52.8
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.4e-84 317.4 322 52.2
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 2.4e-84 316.6 331 51.7
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 4.1e-84 315.8 320 53.4
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 1.3e-82 310.8 328 49.4
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 3.8e-82 309.3 331 50.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 8.5e-82 308.1 316 52.5
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.1e-81 307.8 343 49.6
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 4.2e-81 305.8 335 49.3
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 4.2e-81 305.8 332 51.2
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 4.2e-81 305.8 355 50.4
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 9.4e-81 304.7 354 48.9
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 2.1e-80 303.5 331 50.2
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 2.7e-80 303.1 328 51.2
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 3.6e-80 302.8 348 47.7
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 7.9e-80 301.6 312 52.6
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.0e-79 301.2 317 51.4
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.8e-79 300.4 354 48.0
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.3e-79 300.1 354 47.7
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 2.3e-79 300.1 331 49.5
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 3.0e-79 299.7 324 50.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 3.9e-79 299.3 354 47.2
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.9e-79 299.3 335 49.3
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.5e-78 297.4 320 50.0
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.5e-78 297.4 352 47.2
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 4.4e-78 295.8 339 50.1
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 7.4e-78 295.0 317 50.5
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 9.7e-78 294.7 337 46.0
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.7e-77 293.9 323 51.4
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 1.1e-73 281.2 344 43.9
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 1.4e-73 280.8 344 43.6
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 1.4e-73 280.8 344 44.2
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 1.4e-73 280.8 331 47.7
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.4e-73 280.8 322 47.8
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.2e-73 279.3 332 47.3
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 5.5e-73 278.9 346 44.2
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 7.2e-73 278.5 340 47.4
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.2e-72 277.7 335 45.7
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 1.2e-72 277.7 328 47.9
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 3.6e-72 276.2 344 43.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 3.6e-72 276.2 344 43.9
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 3.0e-71 273.1 316 45.3
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.5e-70 270.8 332 45.5
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 2.0e-70 270.4 316 46.2
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 3.3e-70 269.6 322 46.6
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 4.4e-70 269.2 345 43.5
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 4.4e-70 269.2 331 43.5
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 4.4e-70 269.2 323 45.2
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 5.7e-70 268.9 346 42.8
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 5.7e-70 268.9 346 42.8
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.2e-69 266.9 331 43.5
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 4.1e-68 262.7 335 43.6
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 9.4e-65 251.5 318 46.9
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.5e-62 244.2 268 48.5
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.9e-57 227.3 326 40.5
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 1.0e-55 221.5 222 52.3
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 9.5e-49 198.4 231 46.3
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.2e-48 198.0 234 46.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.8e-40 170.2 187 50.3
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 3.7e-37 159.8 163 49.7
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 1.7e-34 151.0 151 50.3
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 1.8e-31 141.0 136 57.4
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 2.3e-31 140.6 165 49.1
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 4.9e-29 132.9 113 58.4
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 7.3e-25 119.0 180 41.1
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.6e-22 110.5 99 55.6
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.9e-20 104.4 184 39.1
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 2.4e-12 77.4 116 41.4
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 9.2e-12 75.5 139 36.0
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 6.2e-08 62.8 73 47.9
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 5.2e-07 59.7 114 31.6
HanXRQChr11g0346401 Helianthus annuus HOM05D002986 ORTHO05D007611 6.9e-07 59.3 101 27.7
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 1.5e-06 58.2 231 22.5
Manes.09G043000 Manihot esculenta HOM05D006596 ORTHO05D008497 2.6e-06 57.4 122 33.6
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 4.4e-06 56.6 259 23.2
MBI06_g05054_MAGBIO Magnolia biondii HOM05D005362 ORTHO05D006895 7.6e-06 55.8 52 44.2
Carub.0008s0183 Capsella rubella HOM05D002986 ORTHO05D007611 9.9e-06 55.5 89 32.6
Gohir.D05G161532 Gossypium hirsutum HOM05D002986 ORTHO05D007611 9.9e-06 55.5 89 30.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (3 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (3 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings