Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 1.3e-170 603.2 351 100.0
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.6e-117 426.8 330 77.3
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 5.3e-100 368.6 340 66.5
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 5.8e-99 365.2 329 67.8
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 1.9e-97 360.1 328 66.5
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 2.5e-86 323.2 329 64.7
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 2.5e-86 323.2 342 59.6
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 3.5e-72 276.2 364 49.5
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 6.1e-72 275.4 340 51.5
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 7.9e-72 275.0 365 49.3
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 6.7e-71 271.9 337 54.6
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 9.0e-68 261.5 343 51.0
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.1e-64 250.4 348 50.6
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 5.1e-63 245.7 352 49.4
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 8.8e-63 245.0 341 50.7
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 1.1e-62 244.6 345 47.8
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 5.7e-62 242.3 351 47.9
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 9.7e-62 241.5 345 49.0
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 1.3e-61 241.1 340 48.5
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 3.7e-61 239.6 335 48.4
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 1.4e-60 237.7 335 49.6
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 1.4e-60 237.7 335 49.6
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.8e-60 237.3 335 47.5
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.8e-60 237.3 335 47.5
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 3.1e-60 236.5 337 48.7
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 3.1e-60 236.5 349 46.1
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 5.3e-60 235.7 339 48.1
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 5.3e-60 235.7 335 47.2
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 6.9e-60 235.3 338 48.5
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 9.1e-60 235.0 335 49.0
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 9.1e-60 235.0 371 47.4
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 1.5e-59 234.2 366 45.9
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 2.0e-59 233.8 340 47.4
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 5.9e-59 232.3 349 46.4
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 5.9e-59 232.3 369 45.3
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 7.7e-59 231.9 333 49.8
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 7.7e-59 231.9 347 47.0
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 1.0e-58 231.5 349 46.4
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 1.3e-58 231.1 335 47.2
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.3e-58 231.1 335 47.2
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 2.2e-58 230.3 339 46.0
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 2.2e-58 230.3 340 46.8
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 3.8e-58 229.6 338 45.9
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 6.5e-58 228.8 345 46.7
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 8.5e-58 228.4 338 46.2
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 8.5e-58 228.4 335 46.9
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 8.5e-58 228.4 335 46.3
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 1.1e-57 228.0 345 46.1
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 2.5e-57 226.9 344 47.1
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 2.5e-57 226.9 344 47.1
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 2.5e-57 226.9 338 47.0
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 3.2e-57 226.5 350 46.0
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 7.2e-57 225.3 338 45.9
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 1.6e-56 224.2 337 46.6
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 2.1e-56 223.8 346 45.4
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 2.7e-56 223.4 342 44.7
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 4.7e-56 222.6 343 47.2
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 6.1e-56 222.2 335 44.8
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 7.9e-56 221.9 362 44.2
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 7.9e-56 221.9 347 47.0
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 7.9e-56 221.9 333 46.2
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 1.0e-55 221.5 353 45.0
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 3.9e-55 219.5 325 47.1
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 5.1e-55 219.2 348 45.4
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 6.7e-55 218.8 359 44.6
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 8.8e-55 218.4 339 45.4
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 8.8e-55 218.4 335 45.1
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.1e-54 218.0 328 47.0
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 2.6e-54 216.9 352 45.7
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 2.6e-54 216.9 345 46.1
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 3.3e-54 216.5 352 47.4
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 3.3e-54 216.5 335 46.0
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 5.7e-54 215.7 340 44.4
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 1.3e-53 214.5 337 43.9
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 3.7e-53 213.0 340 45.0
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 3.7e-53 213.0 340 45.0
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 6.3e-53 212.2 330 45.8
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 6.3e-53 212.2 330 45.8
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 6.3e-53 212.2 344 43.6
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 1.4e-52 211.1 328 46.3
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 4.1e-52 209.5 336 44.6
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 7.0e-52 208.8 364 45.3
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 7.0e-52 208.8 332 43.4
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 7.0e-52 208.8 370 41.4
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 9.1e-52 208.4 335 43.0
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 2.0e-51 207.2 351 44.7
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 2.6e-51 206.8 336 43.8
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 3.5e-51 206.5 347 41.8
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 7.7e-51 205.3 355 43.1
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 1.0e-50 204.9 334 44.3
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 1.3e-50 204.5 334 42.5
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 5.0e-50 202.6 337 41.8
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 1.9e-49 200.7 340 43.8
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 1.9e-49 200.7 349 41.5
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 2.5e-49 200.3 372 40.6
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 9.4e-49 198.4 342 43.0
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 1.6e-48 197.6 348 42.8
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 2.1e-48 197.2 337 41.8
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 8.0e-48 195.3 330 41.2
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 8.0e-48 195.3 352 41.2
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 8.0e-48 195.3 352 41.2
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 3.0e-47 193.4 348 42.2
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 5.2e-47 192.6 341 41.9
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 2.8e-45 186.8 344 41.9
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 2.8e-45 186.8 348 40.2
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 4.1e-44 183.0 340 40.3
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 1.6e-43 181.0 354 39.0
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 3.2e-41 173.3 375 36.3
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 7.2e-41 172.2 310 41.3
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 7.2e-41 172.2 355 40.0
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 4.0e-39 166.4 339 38.3
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 3.4e-38 163.3 221 54.3
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 5.4e-36 156.0 339 41.0
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 7.7e-35 152.1 293 39.2
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 1.5e-33 147.9 275 43.3
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 3.2e-33 146.7 266 45.1
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 8.0e-32 142.1 310 38.1
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 1.8e-31 141.0 130 64.6
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 3.0e-31 140.2 358 35.5
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 9.8e-30 135.2 150 54.0
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 8.3e-29 132.1 286 36.0
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 7.0e-28 129.0 357 36.4
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 9.1e-28 128.6 272 41.2
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 1.3e-26 124.8 320 37.2
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 5.0e-26 122.9 352 34.1
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 8.6e-26 122.1 344 33.7
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 3.3e-25 120.2 97 68.0
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 5.6e-25 119.4 313 36.7
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 9.5e-25 118.6 286 36.0
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 5.2e-23 112.8 325 32.6
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 5.2e-23 112.8 168 42.9
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 1.5e-22 111.3 213 41.8
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 2.9e-21 107.1 343 31.8
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 4.1e-20 103.2 168 44.0
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.5e-17 94.7 99 53.5
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 5.6e-17 92.8 299 30.4
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 8.0e-16 89.0 307 32.2
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 7.5e-14 82.4 426 27.9
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 2.4e-12 77.4 101 52.5
MCO04G484 Micromonas commoda HOM05D004638 ORTHO05D005443 4.1e-12 76.6 333 28.8
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 1.2e-11 75.1 133 39.8
MSTRG.10449 Avicennia marina HOM05D004638 ORTHO05D005443 2.0e-11 74.3 90 55.6
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 3.5e-11 73.6 80 56.2
Sabra08G0132300 Salix brachista HOM05D004638 ORTHO05D005443 8.1e-08 62.4 54 57.4
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.4e-07 61.6 196 35.2
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 5.2e-07 59.7 137 40.1
RcHm_v2.0_Chr3g0493171 Rosa chinensis HOM05D004638 ORTHO05D005443 3.4e-06 57.0 44 61.4

Acer truncatum (3 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (3 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (2 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (3 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings